FFCP PHASE1:Hg19::chr12:54133160..54133164,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:54133160..54133164,-|id=chr12:54133160..54133164,-|ontology_enrichment_celltype=CL:0002322!7.79e-07!5|ontology_enrichment_celltype_v019=CL:0000333;5.17e-21;5!CL:0002321;1.17e-07;15!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4|ontology_enrichment_celltype_v019_2=CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!8.01e-11!143;DOID:14566!4.31e-10!239;DOID:162!2.36e-09!235;DOID:3095!1.37e-08!22;DOID:2994!1.37e-08!22;DOID:171!8.00e-07!10|ontology_enrichment_disease_v019=DOID:169;1.08e-17;6!DOID:3193;6.43e-14;2!DOID:962;6.43e-14;2!DOID:171;5.02e-11;10!DOID:1192;1.01e-09;3|ontology_enrichment_disease_v019_2=DOID:169,1.12e-17,6;DOID:3193,6.43e-14,2;DOID:962,6.43e-14,2;DOID:171,5.15e-11,10;DOID:1192,1.01e-09,3|ontology_enrichment_uberon=UBERON:0000010!1.91e-07!8;UBERON:0000013!9.92e-07!5;UBERON:0002410!9.92e-07!5|ontology_enrichment_uberon_v019=UBERON:0000013;5.17e-21;5!UBERON:0002410;5.17e-21;5!UBERON:0003714;6.43e-14;2!UBERON:0000010;3.84e-12;8!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.44e-21,5;UBERON:0002410,5.44e-21,5;UBERON:0003714,6.43e-14,2;UBERON:0000010,3.95e-12,8;UBERON:0010077,2.04e-07,4;UBERON:0005389,2.04e-07,4;UBERON:0000484,2.04e-07,4;UBERON:0002546,2.04e-07,4;UBERON:0000965,2.04e-07,4;UBERON:0001803,2.04e-07,4;UBERON:0003073,2.04e-07,4;UBERON:0005426,2.04e-07,4|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0,0.232387885739037,0.621966330092223,0.252320850875628,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0.245040215981032,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3282761290693,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.643012593860077,0.412618309791701,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,1.20008329398946,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,2.04445724412665,0,0,0.425149840203366,0.371807292777007,3.35186950783946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0.472775363535873,0.111231401892069,0,0,0,0,0,0,0,0,0.348724276104376,0.347716544605159,0.801711364730253,0,0,0,0,0.236664001461131,0.255640214277473,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0,0.0999411559249289,0,0.705789743431384,0,0,0,0.143339583151451,0.473314686579554,0,0,0,0,0,0,0.126166424835079,0.546327859818478,0,0.305966489225945,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0,0,0,0,0,0,0,0,0|short_description=p@chr12:54133160..54133164,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:54133160..54133164,- | |||
|id=chr12:54133160..54133164,- | |||
|ontology_enrichment_celltype=CL:0002322!7.79e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.17e-21;5!CL:0002321;1.17e-07;15!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.01e-11!143;DOID:14566!4.31e-10!239;DOID:162!2.36e-09!235;DOID:3095!1.37e-08!22;DOID:2994!1.37e-08!22;DOID:171!8.00e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.08e-17;6!DOID:3193;6.43e-14;2!DOID:962;6.43e-14;2!DOID:171;5.02e-11;10!DOID:1192;1.01e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.12e-17,6;DOID:3193,6.43e-14,2;DOID:962,6.43e-14,2;DOID:171,5.15e-11,10;DOID:1192,1.01e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000010!1.91e-07!8;UBERON:0000013!9.92e-07!5;UBERON:0002410!9.92e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.17e-21;5!UBERON:0002410;5.17e-21;5!UBERON:0003714;6.43e-14;2!UBERON:0000010;3.84e-12;8!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.44e-21,5;UBERON:0002410,5.44e-21,5;UBERON:0003714,6.43e-14,2;UBERON:0000010,3.95e-12,8;UBERON:0010077,2.04e-07,4;UBERON:0005389,2.04e-07,4;UBERON:0000484,2.04e-07,4;UBERON:0002546,2.04e-07,4;UBERON:0000965,2.04e-07,4;UBERON:0001803,2.04e-07,4;UBERON:0003073,2.04e-07,4;UBERON:0005426,2.04e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0,0.232387885739037,0.621966330092223,0.252320850875628,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0.245040215981032,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3282761290693,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0.643012593860077,0.412618309791701,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,1.20008329398946,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,2.04445724412665,0,0,0.425149840203366,0.371807292777007,3.35186950783946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0.472775363535873,0.111231401892069,0,0,0,0,0,0,0,0,0.348724276104376,0.347716544605159,0.801711364730253,0,0,0,0,0.236664001461131,0.255640214277473,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0,0.0999411559249289,0,0.705789743431384,0,0,0,0.143339583151451,0.473314686579554,0,0,0,0,0,0,0.126166424835079,0.546327859818478,0,0.305966489225945,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:54133160..54133164,- | |||
}} |
Revision as of 23:19, 10 September 2013
Short description: | p@chr12:54133160..54133164, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:54133160..54133164, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.04e-07 | 4 |
vertebrate lens cell | 2.04e-07 | 4 |
lens epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.44e-21 | 5 |
autonomic nervous system | 5.44e-21 | 5 |
neural tissue | 6.43e-14 | 2 |
peripheral nervous system | 3.95e-12 | 8 |
cuboidal epithelium | 2.04e-07 | 4 |
transparent eye structure | 2.04e-07 | 4 |
simple cuboidal epithelium | 2.04e-07 | 4 |
cranial placode | 2.04e-07 | 4 |
lens of camera-type eye | 2.04e-07 | 4 |
epithelium of lens | 2.04e-07 | 4 |
lens placode | 2.04e-07 | 4 |
lens vesicle | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.12e-17 | 6 |
peripheral nerve sheath neoplasm | 6.43e-14 | 2 |
neurofibroma | 6.43e-14 | 2 |
neuroectodermal tumor | 5.15e-11 | 10 |
peripheral nervous system neoplasm | 1.01e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.