FFCP PHASE1:Hg19::chr12:85673602..85673614,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8092|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1494|TSSclassifier=W|UniProt=Q15699|association_with_transcript=-270bp_to_ENST00000316824_5end|coexpression_cluster_id=C3339|description=CAGE_peak_6_at_ALX1_5end|id=chr12:85673602..85673614,+|ontology_enrichment_celltype=CL:0002150!8.52e-16!3;CL:0000861!8.52e-16!3;CL:0000710!9.53e-14!20;CL:0000148!1.58e-11!10;CL:0000541!1.58e-11!10;CL:0000133!5.16e-10!59;CL:0000075!7.51e-10!27;CL:0000333!7.69e-09!41;CL:0000147!3.77e-08!14;CL:0000221!6.22e-08!71;CL:0002077!7.87e-08!33;CL:0000197!1.36e-07!6;CL:0000098!1.36e-07!6;CL:0002167!1.36e-07!6|ontology_enrichment_celltype_v019=CL:0002567;1.08e-08;3|ontology_enrichment_celltype_v019_2=CL:0002567,1.12e-08,3|ontology_enrichment_development_v019=UBERON:0003099;5.13e-23;1!UBERON:0003852;5.13e-23;1!UBERON:0005062;9.63e-07;4!UBERON:0007284;9.63e-07;4|ontology_enrichment_disease=DOID:169!2.46e-12!6;DOID:3095!3.73e-12!22;DOID:2994!3.73e-12!22;DOID:171!2.07e-11!10|ontology_enrichment_disease_v019=DOID:171;9.44e-10;10!DOID:5409;7.91e-07;4|ontology_enrichment_disease_v019_2=DOID:171,8.84e-10,10;DOID:5409,8.61e-07,4|ontology_enrichment_uberon=UBERON:0000013!8.91e-15!5;UBERON:0002410!8.91e-15!5;UBERON:0000010!2.96e-08!8|ontology_enrichment_uberon_v019=UBERON:0005705;5.13e-23;1!UBERON:0008193;5.13e-23;1!UBERON:0010912;5.13e-23;1!UBERON:0002514;5.13e-23;1!UBERON:0003457;5.13e-23;1!UBERON:0008907;5.13e-23;1!UBERON:0008001;5.13e-23;1!UBERON:0007213;5.13e-23;1!UBERON:0009891;5.13e-23;1!UBERON:0007914;5.13e-23;1!UBERON:0007375;5.13e-23;1!UBERON:0003323;5.13e-23;1!UBERON:0010258;5.13e-23;1!UBERON:0005253;5.13e-23;1!UBERON:0007842;5.13e-23;1!UBERON:0002397;5.13e-23;1!UBERON:0003113;5.13e-23;1!UBERON:0003277;5.13e-23;1!UBERON:0001709;5.13e-23;1!UBERON:0002244;5.13e-23;1!UBERON:0005620;5.13e-23;1!UBERON:0010364;5.13e-23;1!UBERON:0004288;5.13e-23;1!UBERON:0004089;3.24e-12;2!UBERON:0002346;7.91e-07;4!UBERON:0000923;7.91e-07;4!UBERON:0010316;7.91e-07;4!UBERON:0005291;7.91e-07;4!UBERON:0001708;9.63e-07;4!UBERON:0008895;9.63e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005705,6.40e-23,1;UBERON:0008193,6.40e-23,1;UBERON:0010912,6.40e-23,1;UBERON:0002514,6.40e-23,1;UBERON:0003457,6.40e-23,1;UBERON:0008907,6.40e-23,1;UBERON:0008001,6.40e-23,1;UBERON:0007213,6.40e-23,1;UBERON:0009891,6.40e-23,1;UBERON:0007914,6.40e-23,1;UBERON:0009292,6.40e-23,1;UBERON:0003099,6.40e-23,1;UBERON:0007375,6.40e-23,1;UBERON:0003323,6.40e-23,1;UBERON:0010258,6.40e-23,1;UBERON:0007842,6.40e-23,1;UBERON:0009494,6.40e-23,1;UBERON:0010042,6.40e-23,1;UBERON:0010045,6.40e-23,1;UBERON:0010259,6.40e-23,1;UBERON:0010359,6.40e-23,1;UBERON:0009526,6.40e-23,1;UBERON:0002397,6.40e-23,1;UBERON:0003113,6.40e-23,1;UBERON:0003277,6.40e-23,1;UBERON:0001709,6.40e-23,1;UBERON:0004066,6.40e-23,1;UBERON:0002244,6.40e-23,1;UBERON:0005620,6.40e-23,1;UBERON:0004362,6.40e-23,1;UBERON:0010364,6.40e-23,1;UBERON:0010046,6.40e-23,1;UBERON:0005868,6.40e-23,1;UBERON:0007238,6.40e-23,1;UBERON:0004288,6.40e-23,1;UBERON:0004068,6.40e-23,1;UBERON:0010334,6.40e-23,1;UBERON:0003852,6.40e-23,1;UBERON:0010253,6.40e-23,1;UBERON:0005253,3.62e-12,2;UBERON:0004089,3.62e-12,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.380987365753014,0,2.34434894420094,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.788512075169673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,3.19295893253981,3.87373380556783,2.54557916864949,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,1.72992536041486,0.109209638192014,0,0,2.35477952092104,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14056163399623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p6@ALX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1494 | |||
|TSSclassifier=W | |||
|UniProt=Q15699 | |||
|association_with_transcript=-270bp_to_ENST00000316824_5end | |||
|coexpression_cluster_id=C3339 | |||
|description=CAGE_peak_6_at_ALX1_5end | |||
|id=chr12:85673602..85673614,+ | |||
|ontology_enrichment_celltype=CL:0002150!8.52e-16!3;CL:0000861!8.52e-16!3;CL:0000710!9.53e-14!20;CL:0000148!1.58e-11!10;CL:0000541!1.58e-11!10;CL:0000133!5.16e-10!59;CL:0000075!7.51e-10!27;CL:0000333!7.69e-09!41;CL:0000147!3.77e-08!14;CL:0000221!6.22e-08!71;CL:0002077!7.87e-08!33;CL:0000197!1.36e-07!6;CL:0000098!1.36e-07!6;CL:0002167!1.36e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.08e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.13e-23;1!UBERON:0003852;5.13e-23;1!UBERON:0005062;9.63e-07;4!UBERON:0007284;9.63e-07;4 | |||
|ontology_enrichment_disease=DOID:169!2.46e-12!6;DOID:3095!3.73e-12!22;DOID:2994!3.73e-12!22;DOID:171!2.07e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:171;9.44e-10;10!DOID:5409;7.91e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.84e-10,10;DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000013!8.91e-15!5;UBERON:0002410!8.91e-15!5;UBERON:0000010!2.96e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;5.13e-23;1!UBERON:0008193;5.13e-23;1!UBERON:0010912;5.13e-23;1!UBERON:0002514;5.13e-23;1!UBERON:0003457;5.13e-23;1!UBERON:0008907;5.13e-23;1!UBERON:0008001;5.13e-23;1!UBERON:0007213;5.13e-23;1!UBERON:0009891;5.13e-23;1!UBERON:0007914;5.13e-23;1!UBERON:0007375;5.13e-23;1!UBERON:0003323;5.13e-23;1!UBERON:0010258;5.13e-23;1!UBERON:0005253;5.13e-23;1!UBERON:0007842;5.13e-23;1!UBERON:0002397;5.13e-23;1!UBERON:0003113;5.13e-23;1!UBERON:0003277;5.13e-23;1!UBERON:0001709;5.13e-23;1!UBERON:0002244;5.13e-23;1!UBERON:0005620;5.13e-23;1!UBERON:0010364;5.13e-23;1!UBERON:0004288;5.13e-23;1!UBERON:0004089;3.24e-12;2!UBERON:0002346;7.91e-07;4!UBERON:0000923;7.91e-07;4!UBERON:0010316;7.91e-07;4!UBERON:0005291;7.91e-07;4!UBERON:0001708;9.63e-07;4!UBERON:0008895;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,6.40e-23,1;UBERON:0008193,6.40e-23,1;UBERON:0010912,6.40e-23,1;UBERON:0002514,6.40e-23,1;UBERON:0003457,6.40e-23,1;UBERON:0008907,6.40e-23,1;UBERON:0008001,6.40e-23,1;UBERON:0007213,6.40e-23,1;UBERON:0009891,6.40e-23,1;UBERON:0007914,6.40e-23,1;UBERON:0009292,6.40e-23,1;UBERON:0003099,6.40e-23,1;UBERON:0007375,6.40e-23,1;UBERON:0003323,6.40e-23,1;UBERON:0010258,6.40e-23,1;UBERON:0007842,6.40e-23,1;UBERON:0009494,6.40e-23,1;UBERON:0010042,6.40e-23,1;UBERON:0010045,6.40e-23,1;UBERON:0010259,6.40e-23,1;UBERON:0010359,6.40e-23,1;UBERON:0009526,6.40e-23,1;UBERON:0002397,6.40e-23,1;UBERON:0003113,6.40e-23,1;UBERON:0003277,6.40e-23,1;UBERON:0001709,6.40e-23,1;UBERON:0004066,6.40e-23,1;UBERON:0002244,6.40e-23,1;UBERON:0005620,6.40e-23,1;UBERON:0004362,6.40e-23,1;UBERON:0010364,6.40e-23,1;UBERON:0010046,6.40e-23,1;UBERON:0005868,6.40e-23,1;UBERON:0007238,6.40e-23,1;UBERON:0004288,6.40e-23,1;UBERON:0004068,6.40e-23,1;UBERON:0010334,6.40e-23,1;UBERON:0003852,6.40e-23,1;UBERON:0010253,6.40e-23,1;UBERON:0005253,3.62e-12,2;UBERON:0004089,3.62e-12,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.380987365753014,0,2.34434894420094,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.788512075169673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,3.19295893253981,3.87373380556783,2.54557916864949,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,1.72992536041486,0.109209638192014,0,0,2.35477952092104,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14056163399623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ALX1 | |||
}} |
Revision as of 00:43, 11 September 2013
Short description: | p6@ALX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ALX1_5end |
Coexpression cluster: | C3339_small_normal_epitheloid_neuroblastoma_neuroectodermal_kidney_Olfactory |
Association with transcript: | -270bp_to_ENST00000316824_5end |
EntrezGene: | ALX1 |
HGNC: | 1494 |
UniProt: | Q15699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.84e-10 | 10 |
lung small cell carcinoma | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.