FFCP PHASE1:Hg19::chr12:133039984..133039997,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C53|description=CAGE_peak_at_chr12:133039984..133039997,+|id=chr12:133039984..133039997,+|ontology_enrichment_celltype=CL:0000243!7.67e-08!15;CL:0000125!7.67e-08!15;CL:0000030!7.67e-08!15;CL:0000339!7.67e-08!15;CL:0000095!5.01e-07!17;CL:0000123!5.01e-07!17|ontology_enrichment_celltype_v019=CL:0000243;1.17e-07;15!CL:0000125;1.17e-07;15!CL:0000095;6.01e-07;17|ontology_enrichment_celltype_v019_2=CL:0000243,1.17e-07,15;CL:0000125,1.17e-07,15;CL:0000030,1.17e-07,15;CL:0000339,1.17e-07,15;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17|ontology_enrichment_development_v019=UBERON:0003056;3.86e-38;3!UBERON:0006238;2.55e-11;10!CL:0000339;1.17e-07;15|ontology_enrichment_disease=DOID:3093!4.71e-11!11|ontology_enrichment_disease_v019=DOID:3093;1.85e-10;11!DOID:5409;1.82e-08;4|ontology_enrichment_disease_v019_2=DOID:3093,1.85e-10,11;DOID:5409,1.82e-08,4|ontology_enrichment_uberon=UBERON:0000966!1.55e-07!5;UBERON:0005388!1.55e-07!5;UBERON:0001802!1.55e-07!5;UBERON:0000970!9.56e-07!20|ontology_enrichment_uberon_v019=UBERON:0000966;2.27e-23;5!UBERON:0005388;2.27e-23;5!UBERON:0001802;2.27e-23;5!UBERON:0001905;1.54e-15;2!UBERON:0002757;1.54e-15;2!UBERON:0010134;1.54e-15;2!UBERON:0005408;1.54e-15;2!UBERON:0001899;1.54e-15;2!UBERON:0000970;2.19e-13;20!UBERON:0002104;8.73e-13;21!UBERON:0000020;9.74e-12;23!UBERON:0001032;2.80e-11;24!UBERON:0004456;2.80e-11;24!UBERON:0003296;1.96e-08;4!UBERON:0010133;1.96e-08;4!UBERON:0002784;1.96e-08;4!UBERON:0000019;6.97e-07;19!UBERON:0000047;6.97e-07;19!UBERON:0004088;6.97e-07;19!UBERON:0010230;6.97e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.26e-19,6;UBERON:0005388,1.26e-19,6;UBERON:0001802,1.26e-19,6;UBERON:0001905,1.54e-15,2;UBERON:0002757,1.54e-15,2;UBERON:0010134,1.54e-15,2;UBERON:0005408,1.54e-15,2;UBERON:0001899,1.54e-15,2;UBERON:0000970,9.09e-13,21;UBERON:0002104,9.09e-13,21;UBERON:0000020,2.90e-11,24;UBERON:0001032,2.90e-11,24;UBERON:0004456,2.90e-11,24;UBERON:0003296,1.96e-08,4;UBERON:0010133,1.96e-08,4;UBERON:0002784,1.96e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0.235694034616795,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3688088910723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07214816264985,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.46541978939804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0.26721740526556,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:133039984..133039997,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr12:133039984..133039997,+ | |||
|id=chr12:133039984..133039997,+ | |||
|ontology_enrichment_celltype=CL:0000243!7.67e-08!15;CL:0000125!7.67e-08!15;CL:0000030!7.67e-08!15;CL:0000339!7.67e-08!15;CL:0000095!5.01e-07!17;CL:0000123!5.01e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.17e-07;15!CL:0000125;1.17e-07;15!CL:0000095;6.01e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.17e-07,15;CL:0000125,1.17e-07,15;CL:0000030,1.17e-07,15;CL:0000339,1.17e-07,15;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.86e-38;3!UBERON:0006238;2.55e-11;10!CL:0000339;1.17e-07;15 | |||
|ontology_enrichment_disease=DOID:3093!4.71e-11!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.85e-10;11!DOID:5409;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.85e-10,11;DOID:5409,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.55e-07!5;UBERON:0005388!1.55e-07!5;UBERON:0001802!1.55e-07!5;UBERON:0000970!9.56e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.27e-23;5!UBERON:0005388;2.27e-23;5!UBERON:0001802;2.27e-23;5!UBERON:0001905;1.54e-15;2!UBERON:0002757;1.54e-15;2!UBERON:0010134;1.54e-15;2!UBERON:0005408;1.54e-15;2!UBERON:0001899;1.54e-15;2!UBERON:0000970;2.19e-13;20!UBERON:0002104;8.73e-13;21!UBERON:0000020;9.74e-12;23!UBERON:0001032;2.80e-11;24!UBERON:0004456;2.80e-11;24!UBERON:0003296;1.96e-08;4!UBERON:0010133;1.96e-08;4!UBERON:0002784;1.96e-08;4!UBERON:0000019;6.97e-07;19!UBERON:0000047;6.97e-07;19!UBERON:0004088;6.97e-07;19!UBERON:0010230;6.97e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.26e-19,6;UBERON:0005388,1.26e-19,6;UBERON:0001802,1.26e-19,6;UBERON:0001905,1.54e-15,2;UBERON:0002757,1.54e-15,2;UBERON:0010134,1.54e-15,2;UBERON:0005408,1.54e-15,2;UBERON:0001899,1.54e-15,2;UBERON:0000970,9.09e-13,21;UBERON:0002104,9.09e-13,21;UBERON:0000020,2.90e-11,24;UBERON:0001032,2.90e-11,24;UBERON:0004456,2.90e-11,24;UBERON:0003296,1.96e-08,4;UBERON:0010133,1.96e-08,4;UBERON:0002784,1.96e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0.235694034616795,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3688088910723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07214816264985,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.46541978939804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0.26721740526556,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:133039984..133039997,+ | |||
}} |
Revision as of 21:49, 10 September 2013
Short description: | p@chr12:133039984..133039997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:133039984..133039997, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.17e-07 | 15 |
glial cell | 1.17e-07 | 15 |
glioblast | 1.17e-07 | 15 |
glioblast (sensu Vertebrata) | 1.17e-07 | 15 |
neuron associated cell | 6.01e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
retina | 1.26e-19 | 6 |
photoreceptor array | 1.26e-19 | 6 |
posterior segment of eyeball | 1.26e-19 | 6 |
pineal body | 1.54e-15 | 2 |
regional part of epithalamus | 1.54e-15 | 2 |
secretory circumventricular organ | 1.54e-15 | 2 |
circumventricular organ | 1.54e-15 | 2 |
epithalamus | 1.54e-15 | 2 |
eye | 9.09e-13 | 21 |
visual system | 9.09e-13 | 21 |
sense organ | 2.90e-11 | 24 |
sensory system | 2.90e-11 | 24 |
entire sense organ system | 2.90e-11 | 24 |
gland of diencephalon | 1.96e-08 | 4 |
neuroendocrine gland | 1.96e-08 | 4 |
regional part of diencephalon | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.85e-10 | 11 |
lung small cell carcinoma | 1.82e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.