FFCP PHASE1:Hg19::chr14:57735636..57735649,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20192|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000554931_5end|description=CAGE_peak_6_at_MUDENG_5end|id=chr14:57735636..57735649,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002521;1.57e-08;3|ontology_enrichment_celltype_v019_2=CL:0002521,4.03e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.23e-10!86;UBERON:0001017!1.47e-10!82;UBERON:0001049!2.32e-10!57;UBERON:0005068!2.32e-10!57;UBERON:0006241!2.32e-10!57;UBERON:0007135!2.32e-10!57;UBERON:0000073!2.62e-10!94;UBERON:0001016!2.62e-10!94;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0002616!2.29e-09!59;UBERON:0003075!3.20e-09!86;UBERON:0007284!3.20e-09!86;UBERON:0003080!4.68e-09!42;UBERON:0000955!4.80e-08!69;UBERON:0006238!4.80e-08!69;UBERON:0002346!7.67e-08!90;UBERON:0003056!1.42e-07!61;UBERON:0007023!5.84e-07!115|ontology_enrichment_uberon_v019=UBERON:0001894;5.04e-18;7!UBERON:0000073;4.39e-12;53!UBERON:0002616;4.39e-12;53!UBERON:0002784;3.39e-11;4!UBERON:0003296;3.76e-11;4!UBERON:0010133;3.76e-11;4!UBERON:0002780;3.47e-10;41!UBERON:0001890;3.47e-10;41!UBERON:0002190;1.57e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001894,4.86e-18,7;UBERON:0006222,4.86e-18,7;UBERON:0000073,1.01e-16,53;UBERON:0002616,1.01e-16,53;UBERON:0001049,1.58e-15,56;UBERON:0005068,1.58e-15,56;UBERON:0006241,1.58e-15,56;UBERON:0007135,1.58e-15,56;UBERON:0002780,7.43e-15,41;UBERON:0001890,7.43e-15,41;UBERON:0003080,7.43e-15,41;UBERON:0006240,7.43e-15,41;UBERON:0001017,3.44e-12,81;UBERON:0000955,1.44e-11,68;UBERON:0006238,1.44e-11,68;UBERON:0001016,1.70e-11,89;UBERON:0002784,3.67e-11,4;UBERON:0003296,1.13e-10,4;UBERON:0010133,1.13e-10,4;UBERON:0003075,5.59e-10,82;UBERON:0007284,5.59e-10,82;UBERON:0003056,8.05e-10,61;UBERON:0010314,9.62e-10,132;UBERON:0002346,2.94e-09,86;UBERON:0007023,8.85e-09,114;UBERON:0010371,2.11e-08,104;UBERON:0002190,4.03e-08,3;UBERON:0001897,9.67e-07,2;UBERON:0010225,9.67e-07,2|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0,0,2.53299878168311,1.26343974685366,1.04474251279935,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.410623275218653,0.251085279189606,0.458480434487708,0.246301768349837,0.236132343941038,0,1.53531759238885,0.309632246632152,0,0,0.369754010166788,0.387336002901508,0.142169232487422,0.293600439334847,0.553995408531877,0,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0.365328307529268,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0.167186495390678,1.62961133316795,1.89379122293893,0,0.891283655081389,0.589211814949674,1.55073726208535,1.35401931882508,0.384273959177026,0.130059347559878,0.493313713811028,0,0,0.593146252648242,0.535081656179426,0,0.226618685395132,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,1.30216690771284,0.950452044448374,0.301150238155546,0.127986611154418,0,1.18388626022008,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.511450247374121,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,0,0.567208902984407,0.886917589850256,0.790513071238134,0.392937226493138,0,0,0.324547393654683,0,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0.825354125820202,0,1.8089173141853,1.42306505074684,1.33888245105868,0.402829317109147,0.760272105718513,0,0,0,0.625098097988558,0.22452937262617,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0.939475989150119,0.161872944368132,0.702254033511242,0.61246251376468,0.368502951935304,0.516628905878827,0,0.494533858557114,0,0,0.673344455816265,0.500474079487857,1.6623846929051,0,0,0.600952235626387,0.680593098960126,0,0,0.211931901159562,0,0.618315175430633,1.28820270022815,0.37223371266318,0.168776332241266,0.876933046450788,0.252433774244115,0.460249493211497,0.646584227275248,0.710019185033229,0.403008392910561,0.339121184620975,0.193260853163297,0,0.286804595389004,0.975789649036763,0.795178609928912,0.464775771478074,0.207322110030741,0.252320850875628,0,0,1.28648187638577,0,1.39310378409594,0.721879481669586,0.473227200159376,0.337169380156203,0.723033089650446,0.772057809126758,0.435758888184812,0.237270619111097,0.674156540800822,0.784885860501384,0,0,0,0.4115740113314,0,1.26755034821831,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20192 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000554931_5end | |||
|description=CAGE_peak_6_at_MUDENG_5end | |||
|id=chr14:57735636..57735649,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;1.57e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,4.03e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.23e-10!86;UBERON:0001017!1.47e-10!82;UBERON:0001049!2.32e-10!57;UBERON:0005068!2.32e-10!57;UBERON:0006241!2.32e-10!57;UBERON:0007135!2.32e-10!57;UBERON:0000073!2.62e-10!94;UBERON:0001016!2.62e-10!94;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0002616!2.29e-09!59;UBERON:0003075!3.20e-09!86;UBERON:0007284!3.20e-09!86;UBERON:0003080!4.68e-09!42;UBERON:0000955!4.80e-08!69;UBERON:0006238!4.80e-08!69;UBERON:0002346!7.67e-08!90;UBERON:0003056!1.42e-07!61;UBERON:0007023!5.84e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;5.04e-18;7!UBERON:0000073;4.39e-12;53!UBERON:0002616;4.39e-12;53!UBERON:0002784;3.39e-11;4!UBERON:0003296;3.76e-11;4!UBERON:0010133;3.76e-11;4!UBERON:0002780;3.47e-10;41!UBERON:0001890;3.47e-10;41!UBERON:0002190;1.57e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,4.86e-18,7;UBERON:0006222,4.86e-18,7;UBERON:0000073,1.01e-16,53;UBERON:0002616,1.01e-16,53;UBERON:0001049,1.58e-15,56;UBERON:0005068,1.58e-15,56;UBERON:0006241,1.58e-15,56;UBERON:0007135,1.58e-15,56;UBERON:0002780,7.43e-15,41;UBERON:0001890,7.43e-15,41;UBERON:0003080,7.43e-15,41;UBERON:0006240,7.43e-15,41;UBERON:0001017,3.44e-12,81;UBERON:0000955,1.44e-11,68;UBERON:0006238,1.44e-11,68;UBERON:0001016,1.70e-11,89;UBERON:0002784,3.67e-11,4;UBERON:0003296,1.13e-10,4;UBERON:0010133,1.13e-10,4;UBERON:0003075,5.59e-10,82;UBERON:0007284,5.59e-10,82;UBERON:0003056,8.05e-10,61;UBERON:0010314,9.62e-10,132;UBERON:0002346,2.94e-09,86;UBERON:0007023,8.85e-09,114;UBERON:0010371,2.11e-08,104;UBERON:0002190,4.03e-08,3;UBERON:0001897,9.67e-07,2;UBERON:0010225,9.67e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0,0,2.53299878168311,1.26343974685366,1.04474251279935,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.410623275218653,0.251085279189606,0.458480434487708,0.246301768349837,0.236132343941038,0,1.53531759238885,0.309632246632152,0,0,0.369754010166788,0.387336002901508,0.142169232487422,0.293600439334847,0.553995408531877,0,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0.365328307529268,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0.167186495390678,1.62961133316795,1.89379122293893,0,0.891283655081389,0.589211814949674,1.55073726208535,1.35401931882508,0.384273959177026,0.130059347559878,0.493313713811028,0,0,0.593146252648242,0.535081656179426,0,0.226618685395132,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,1.30216690771284,0.950452044448374,0.301150238155546,0.127986611154418,0,1.18388626022008,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.511450247374121,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,0,0.567208902984407,0.886917589850256,0.790513071238134,0.392937226493138,0,0,0.324547393654683,0,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0.825354125820202,0,1.8089173141853,1.42306505074684,1.33888245105868,0.402829317109147,0.760272105718513,0,0,0,0.625098097988558,0.22452937262617,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0.939475989150119,0.161872944368132,0.702254033511242,0.61246251376468,0.368502951935304,0.516628905878827,0,0.494533858557114,0,0,0.673344455816265,0.500474079487857,1.6623846929051,0,0,0.600952235626387,0.680593098960126,0,0,0.211931901159562,0,0.618315175430633,1.28820270022815,0.37223371266318,0.168776332241266,0.876933046450788,0.252433774244115,0.460249493211497,0.646584227275248,0.710019185033229,0.403008392910561,0.339121184620975,0.193260853163297,0,0.286804595389004,0.975789649036763,0.795178609928912,0.464775771478074,0.207322110030741,0.252320850875628,0,0,1.28648187638577,0,1.39310378409594,0.721879481669586,0.473227200159376,0.337169380156203,0.723033089650446,0.772057809126758,0.435758888184812,0.237270619111097,0.674156540800822,0.784885860501384,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.614942192715568,0.857839051492628,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,0.463721619900307,1.52631302506568,0.144366447761074,0,0,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0.839910640994298,0.567100388969546,0.268675568108545,0.290633938513962,0,1.97065295158377,0.616339038092582,0.621984346622316,0.288239906833923,0.88369703398466,0.571481048629521,0,0,0,0.822619941626588,0.300343057843917,0.285826432630578,0,0,0.2933531432838,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0.791951872933429,1.80863626235752,0.871533458600294,1.09970290300263,0,1.00451418286425,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.895304816199478,0,0.197030760201927,0,0.128343036279748,0.76228387266739,1.30139853857622,0,0.335032530668698,1.27587750330633,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0.415941723061614,1.07057393278297,0,0.234282829985426,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0,0.343143423810856,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0,0.496215615637554,0.767309866440312,0.841980283299221,0.640695746278505,0,1.28683136914886,0,0.462629081407967,0.532685175939381,0.410635780069046,0,0.464841513839837,0.362578348774867,0.601519410909855,0.276242966807689,0.574072240823034,0,0.524497659837696,0.451199612907412,0.231046011313244,0,0,0.633309773357254,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,1.09629938322967,1.3071772551245,0.769350375349168,0,0.325378394664303,0,0.640986253728404,0.907604499126468,0.574265537996172,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.596586391912706,0.712256285173899,0.165284915360978,0.192190067365106,0.638063562472921,0.30347334256665,0,1.25924938732256,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.949138274156178,0.38126038784765,0,0.855877976067841,0,0.78494864019923,0.539617372749944,0.274537029736055,0.471249609382746,0.202182481573316,0,0.842516912477962,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0.281695602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| |||
|short_description=p6@MUDENG | |||
}} |
Revision as of 04:53, 11 September 2013
Short description: | p6@MUDENG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_MUDENG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000554931_5end |
EntrezGene: | MUDENG |
HGNC: | 20192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 4.03e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
diencephalon | 4.86e-18 | 7 |
future diencephalon | 4.86e-18 | 7 |
regional part of nervous system | 1.01e-16 | 53 |
regional part of brain | 1.01e-16 | 53 |
neural tube | 1.58e-15 | 56 |
neural rod | 1.58e-15 | 56 |
future spinal cord | 1.58e-15 | 56 |
neural keel | 1.58e-15 | 56 |
regional part of forebrain | 7.43e-15 | 41 |
forebrain | 7.43e-15 | 41 |
anterior neural tube | 7.43e-15 | 41 |
future forebrain | 7.43e-15 | 41 |
central nervous system | 3.44e-12 | 81 |
brain | 1.44e-11 | 68 |
future brain | 1.44e-11 | 68 |
nervous system | 1.70e-11 | 89 |
regional part of diencephalon | 3.67e-11 | 4 |
gland of diencephalon | 1.13e-10 | 4 |
neuroendocrine gland | 1.13e-10 | 4 |
neural plate | 5.59e-10 | 82 |
presumptive neural plate | 5.59e-10 | 82 |
pre-chordal neural plate | 8.05e-10 | 61 |
structure with developmental contribution from neural crest | 9.62e-10 | 132 |
neurectoderm | 2.94e-09 | 86 |
adult organism | 8.85e-09 | 114 |
ecto-epithelium | 2.11e-08 | 104 |
subcutaneous adipose tissue | 4.03e-08 | 3 |
dorsal plus ventral thalamus | 9.67e-07 | 2 |
thalamic complex | 9.67e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.