FFCP PHASE1:Hg19::chr15:42703121..42703135,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_AF147441_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_CAPN3_5end | |||
|id=chr15:42703121..42703135,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.24e-12!10;CL:0000541!7.24e-12!10;CL:0000147!2.15e-08!14 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.98e-27!57;UBERON:0005068!2.98e-27!57;UBERON:0006241!2.98e-27!57;UBERON:0007135!2.98e-27!57;UBERON:0002616!2.23e-23!59;UBERON:0007023!1.19e-21!115;UBERON:0000955!2.65e-21!69;UBERON:0006238!2.65e-21!69;UBERON:0002298!1.94e-20!8;UBERON:0001017!2.39e-19!82;UBERON:0002780!1.54e-18!41;UBERON:0001890!1.54e-18!41;UBERON:0006240!1.54e-18!41;UBERON:0005743!2.99e-18!86;UBERON:0003080!4.90e-18!42;UBERON:0003075!1.23e-16!86;UBERON:0007284!1.23e-16!86;UBERON:0000073!4.10e-16!94;UBERON:0001016!4.10e-16!94;UBERON:0002346!1.05e-15!90;UBERON:0001896!1.06e-14!3;UBERON:0005290!1.06e-14!3;UBERON:0010096!1.06e-14!3;UBERON:0006331!1.70e-14!3;UBERON:0002020!9.75e-14!34;UBERON:0003528!9.75e-14!34;UBERON:0001893!1.24e-13!34;UBERON:0000200!1.27e-12!6;UBERON:0002791!1.16e-11!33;UBERON:0003056!1.37e-11!61;UBERON:0000033!1.91e-11!123;UBERON:0001630!5.13e-11!2;UBERON:0005090!5.13e-11!2;UBERON:0001897!7.96e-11!2;UBERON:0000153!1.04e-10!129;UBERON:0007811!1.04e-10!129;UBERON:0003076!1.28e-10!15;UBERON:0003057!1.28e-10!15;UBERON:0002148!5.32e-10!2;UBERON:0009662!5.32e-10!2;UBERON:0001869!1.08e-09!32;UBERON:0004733!1.95e-09!12;UBERON:0002028!1.95e-09!12;UBERON:0007277!1.95e-09!12;UBERON:0002619!5.54e-09!22;UBERON:0004121!5.79e-09!169;UBERON:0004732!1.09e-08!13;UBERON:0000924!1.20e-08!173;UBERON:0006601!1.20e-08!173;UBERON:0002308!2.56e-08!9;UBERON:0000125!2.56e-08!9;UBERON:0000956!7.67e-08!25;UBERON:0000203!7.67e-08!25;UBERON:0003135!2.00e-07!11;UBERON:0001950!2.03e-07!20;UBERON:0002771!4.21e-07!3;UBERON:0000988!6.09e-07!3;UBERON:0001894!8.09e-07!7;UBERON:0006222!8.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.16e-29;1!UBERON:0003831;3.16e-29;1!UBERON:0003898;3.16e-29;1!UBERON:0004830;3.16e-29;1!UBERON:0003830;3.16e-29;1!UBERON:0005175;3.16e-29;1!UBERON:0001774;3.16e-29;1!UBERON:0001103;3.16e-29;1!UBERON:0001897;2.37e-15;2!UBERON:0005090;2.37e-15;2!UBERON:0001630;2.37e-15;2!UBERON:0010225;2.37e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0002784;2.43e-08;4!UBERON:0001134;4.83e-08;16!UBERON:0002036;4.83e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,4.20e-29,1;UBERON:0003831,4.20e-29,1;UBERON:0003898,4.20e-29,1;UBERON:0004830,4.20e-29,1;UBERON:0003830,4.20e-29,1;UBERON:0005175,4.20e-29,1;UBERON:0001774,4.20e-29,1;UBERON:0001103,4.20e-29,1;UBERON:0010084,4.20e-29,1;UBERON:0001897,2.37e-15,2;UBERON:0010225,2.37e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0005090,2.74e-15,2;UBERON:0001630,2.74e-15,2;UBERON:0003135,2.07e-11,11;UBERON:0002784,2.43e-08,4 | |||
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|short_description=p13@CAPN3 | |||
}} |
Revision as of 07:01, 11 September 2013
Short description: | p13@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_CAPN3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -51bp_to_AF147441_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 4.20e-29 | 1 |
respiratory system muscle | 4.20e-29 | 1 |
skeletal muscle of trunk | 4.20e-29 | 1 |
respiratory system skeletal muscle | 4.20e-29 | 1 |
thoracic segment muscle | 4.20e-29 | 1 |
chest organ | 4.20e-29 | 1 |
muscle of trunk | 4.20e-29 | 1 |
diaphragm | 4.20e-29 | 1 |
future diaphragm | 4.20e-29 | 1 |
dorsal plus ventral thalamus | 2.37e-15 | 2 |
thalamic complex | 2.37e-15 | 2 |
testis | 2.65e-15 | 8 |
muscle structure | 2.74e-15 | 2 |
muscle organ | 2.74e-15 | 2 |
male reproductive organ | 2.07e-11 | 11 |
regional part of diencephalon | 2.43e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.