FFCP PHASE1:Hg19::chr16:2882120..2882124,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C37|description=CAGE_peak_at_chr16:2882120..2882124,+|id=chr16:2882120..2882124,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002552;6.21e-07;5|ontology_enrichment_celltype_v019_2=CL:0002552,6.04e-07,5|ontology_enrichment_development_v019=UBERON:0006298;7.48e-30;1!UBERON:0008801;2.73e-29;1!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000166!2.33e-35!21;UBERON:0001829!6.27e-32!2;UBERON:0003127!3.46e-31!2;UBERON:0000078!1.74e-30!18;UBERON:0000165!1.88e-26!28;UBERON:0000930!1.88e-26!28;UBERON:0001044!6.20e-24!6;UBERON:0003293!6.20e-24!6;UBERON:0003294!6.20e-24!6;UBERON:0010047!6.20e-24!6;UBERON:0000167!6.20e-24!6;UBERON:0001723!1.59e-21!3;UBERON:0001033!1.59e-21!3;UBERON:0010056!1.59e-21!3;UBERON:0000161!4.25e-21!35;UBERON:0001004!2.52e-20!72;UBERON:0001736!4.72e-17!1;UBERON:0006298!4.72e-17!1;UBERON:0001831!1.04e-16!1;UBERON:0001567!1.04e-16!1;UBERON:0008801!1.04e-16!1;UBERON:0002372!3.07e-16!1;UBERON:0001961!3.07e-16!1;UBERON:0001744!3.07e-16!1;UBERON:0001735!3.07e-16!1;UBERON:0001444!2.78e-15!48;UBERON:0003408!1.22e-14!10;UBERON:0001042!2.33e-14!10;UBERON:0009145!2.33e-14!10;UBERON:0006562!4.11e-13!11;UBERON:0001557!4.21e-13!19;UBERON:0001041!7.51e-12!98;UBERON:0000072!1.17e-11!46;UBERON:0000065!4.36e-10!53;UBERON:0003126!1.24e-09!7;UBERON:0001005!1.24e-09!7;UBERON:0004089!5.08e-09!2;UBERON:0000341!6.42e-09!2;UBERON:0001007!7.12e-09!155;UBERON:0001555!7.12e-09!155;UBERON:0007026!7.12e-09!155;UBERON:0000077!1.01e-08!130;UBERON:0004921!1.01e-08!129;UBERON:0004185!1.01e-08!129;UBERON:0004119!4.67e-08!169;UBERON:0000925!4.67e-08!169;UBERON:0006595!4.67e-08!169;UBERON:0003102!1.75e-07!95;UBERON:0000153!7.55e-07!129;UBERON:0007811!7.55e-07!129|ontology_enrichment_uberon_v019=UBERON:0001829;3.10e-57;2!UBERON:0001044;4.53e-43;6!UBERON:0003293;4.53e-43;6!UBERON:0003294;4.53e-43;6!UBERON:0010047;4.53e-43;6!UBERON:0003408;4.53e-43;6!UBERON:0000167;4.53e-43;6!UBERON:0001723;1.98e-38;3!UBERON:0001033;1.98e-38;3!UBERON:0000165;1.88e-36;28!UBERON:0001736;7.48e-30;1!UBERON:0001831;2.73e-29;1!UBERON:0001567;2.73e-29;1!UBERON:0000161;2.60e-24;19!UBERON:0000166;2.60e-24;19!UBERON:0001041;5.56e-19;14!UBERON:0004089;2.21e-15;2!UBERON:0000033;4.27e-13;50!UBERON:0007811;5.57e-13;52!UBERON:0001444;1.63e-12;48!UBERON:0000153;2.31e-11;54!UBERON:0001555;3.07e-11;54!UBERON:0002365;8.44e-09;31!UBERON:0002330;8.44e-09;31!UBERON:0004921;1.94e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.58e-57,2;UBERON:0000166,3.37e-46,22;UBERON:0001044,4.86e-43,6;UBERON:0003293,4.86e-43,6;UBERON:0003294,4.86e-43,6;UBERON:0010047,4.86e-43,6;UBERON:0000167,4.86e-43,6;UBERON:0001723,2.64e-38,3;UBERON:0001033,2.64e-38,3;UBERON:0010056,2.64e-38,3;UBERON:0000165,3.56e-35,29;UBERON:0000930,3.56e-35,29;UBERON:0001736,7.48e-30,1;UBERON:0006298,7.48e-30,1;UBERON:0001831,3.16e-29,1;UBERON:0001567,3.16e-29,1;UBERON:0008801,3.16e-29,1;UBERON:0000161,1.99e-28,36;UBERON:0003408,3.30e-26,10;UBERON:0001444,5.40e-21,49;UBERON:0000033,2.05e-18,56;UBERON:0000153,1.15e-16,62;UBERON:0007811,1.15e-16,62;UBERON:0004089,2.37e-15,2;UBERON:0001004,5.20e-14,74;UBERON:0001042,2.81e-12,10;UBERON:0009145,2.81e-12,10;UBERON:0006562,2.98e-11,11;UBERON:0003102,1.56e-10,99;UBERON:0002365,5.69e-09,31;UBERON:0002330,5.69e-09,31;UBERON:0001041,1.81e-08,87;UBERON:0008814,3.04e-07,18;UBERON:0001007,3.45e-07,145;UBERON:0001555,3.45e-07,145;UBERON:0007026,3.45e-07,145;UBERON:0001557,6.57e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_at_chr16:2882120..2882124,+ | |||
|id=chr16:2882120..2882124,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002552;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.48e-30;1!UBERON:0008801;2.73e-29;1!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!2.33e-35!21;UBERON:0001829!6.27e-32!2;UBERON:0003127!3.46e-31!2;UBERON:0000078!1.74e-30!18;UBERON:0000165!1.88e-26!28;UBERON:0000930!1.88e-26!28;UBERON:0001044!6.20e-24!6;UBERON:0003293!6.20e-24!6;UBERON:0003294!6.20e-24!6;UBERON:0010047!6.20e-24!6;UBERON:0000167!6.20e-24!6;UBERON:0001723!1.59e-21!3;UBERON:0001033!1.59e-21!3;UBERON:0010056!1.59e-21!3;UBERON:0000161!4.25e-21!35;UBERON:0001004!2.52e-20!72;UBERON:0001736!4.72e-17!1;UBERON:0006298!4.72e-17!1;UBERON:0001831!1.04e-16!1;UBERON:0001567!1.04e-16!1;UBERON:0008801!1.04e-16!1;UBERON:0002372!3.07e-16!1;UBERON:0001961!3.07e-16!1;UBERON:0001744!3.07e-16!1;UBERON:0001735!3.07e-16!1;UBERON:0001444!2.78e-15!48;UBERON:0003408!1.22e-14!10;UBERON:0001042!2.33e-14!10;UBERON:0009145!2.33e-14!10;UBERON:0006562!4.11e-13!11;UBERON:0001557!4.21e-13!19;UBERON:0001041!7.51e-12!98;UBERON:0000072!1.17e-11!46;UBERON:0000065!4.36e-10!53;UBERON:0003126!1.24e-09!7;UBERON:0001005!1.24e-09!7;UBERON:0004089!5.08e-09!2;UBERON:0000341!6.42e-09!2;UBERON:0001007!7.12e-09!155;UBERON:0001555!7.12e-09!155;UBERON:0007026!7.12e-09!155;UBERON:0000077!1.01e-08!130;UBERON:0004921!1.01e-08!129;UBERON:0004185!1.01e-08!129;UBERON:0004119!4.67e-08!169;UBERON:0000925!4.67e-08!169;UBERON:0006595!4.67e-08!169;UBERON:0003102!1.75e-07!95;UBERON:0000153!7.55e-07!129;UBERON:0007811!7.55e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.10e-57;2!UBERON:0001044;4.53e-43;6!UBERON:0003293;4.53e-43;6!UBERON:0003294;4.53e-43;6!UBERON:0010047;4.53e-43;6!UBERON:0003408;4.53e-43;6!UBERON:0000167;4.53e-43;6!UBERON:0001723;1.98e-38;3!UBERON:0001033;1.98e-38;3!UBERON:0000165;1.88e-36;28!UBERON:0001736;7.48e-30;1!UBERON:0001831;2.73e-29;1!UBERON:0001567;2.73e-29;1!UBERON:0000161;2.60e-24;19!UBERON:0000166;2.60e-24;19!UBERON:0001041;5.56e-19;14!UBERON:0004089;2.21e-15;2!UBERON:0000033;4.27e-13;50!UBERON:0007811;5.57e-13;52!UBERON:0001444;1.63e-12;48!UBERON:0000153;2.31e-11;54!UBERON:0001555;3.07e-11;54!UBERON:0002365;8.44e-09;31!UBERON:0002330;8.44e-09;31!UBERON:0004921;1.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.58e-57,2;UBERON:0000166,3.37e-46,22;UBERON:0001044,4.86e-43,6;UBERON:0003293,4.86e-43,6;UBERON:0003294,4.86e-43,6;UBERON:0010047,4.86e-43,6;UBERON:0000167,4.86e-43,6;UBERON:0001723,2.64e-38,3;UBERON:0001033,2.64e-38,3;UBERON:0010056,2.64e-38,3;UBERON:0000165,3.56e-35,29;UBERON:0000930,3.56e-35,29;UBERON:0001736,7.48e-30,1;UBERON:0006298,7.48e-30,1;UBERON:0001831,3.16e-29,1;UBERON:0001567,3.16e-29,1;UBERON:0008801,3.16e-29,1;UBERON:0000161,1.99e-28,36;UBERON:0003408,3.30e-26,10;UBERON:0001444,5.40e-21,49;UBERON:0000033,2.05e-18,56;UBERON:0000153,1.15e-16,62;UBERON:0007811,1.15e-16,62;UBERON:0004089,2.37e-15,2;UBERON:0001004,5.20e-14,74;UBERON:0001042,2.81e-12,10;UBERON:0009145,2.81e-12,10;UBERON:0006562,2.98e-11,11;UBERON:0003102,1.56e-10,99;UBERON:0002365,5.69e-09,31;UBERON:0002330,5.69e-09,31;UBERON:0001041,1.81e-08,87;UBERON:0008814,3.04e-07,18;UBERON:0001007,3.45e-07,145;UBERON:0001555,3.45e-07,145;UBERON:0007026,3.45e-07,145;UBERON:0001557,6.57e-07,19 | |||
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|short_description=p@chr16:2882120..2882124,+ | |||
}} |
Revision as of 09:56, 11 September 2013
Short description: | p@chr16:2882120..2882124, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:2882120..2882124, + |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.58e-57 | 2 |
oral opening | 3.37e-46 | 22 |
saliva-secreting gland | 4.86e-43 | 6 |
gland of oral region | 4.86e-43 | 6 |
gland of foregut | 4.86e-43 | 6 |
oral gland | 4.86e-43 | 6 |
oral cavity | 4.86e-43 | 6 |
tongue | 2.64e-38 | 3 |
gustatory system | 2.64e-38 | 3 |
future tongue | 2.64e-38 | 3 |
mouth | 3.56e-35 | 29 |
stomodeum | 3.56e-35 | 29 |
submandibular gland | 7.48e-30 | 1 |
submandibular gland primordium | 7.48e-30 | 1 |
parotid gland | 3.16e-29 | 1 |
cheek | 3.16e-29 | 1 |
parotid gland primordium | 3.16e-29 | 1 |
orifice | 1.99e-28 | 36 |
gland of gut | 3.30e-26 | 10 |
subdivision of head | 5.40e-21 | 49 |
head | 2.05e-18 | 56 |
anterior region of body | 1.15e-16 | 62 |
craniocervical region | 1.15e-16 | 62 |
midface | 2.37e-15 | 2 |
respiratory system | 5.20e-14 | 74 |
chordate pharynx | 2.81e-12 | 10 |
pharyngeal region of foregut | 2.81e-12 | 10 |
pharynx | 2.98e-11 | 11 |
surface structure | 1.56e-10 | 99 |
exocrine gland | 5.69e-09 | 31 |
exocrine system | 5.69e-09 | 31 |
foregut | 1.81e-08 | 87 |
pharyngeal arch system | 3.04e-07 | 18 |
digestive system | 3.45e-07 | 145 |
digestive tract | 3.45e-07 | 145 |
primitive gut | 3.45e-07 | 145 |
upper respiratory tract | 6.57e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.