FFCP PHASE1:Hg19::chr16:57880444..57880457,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3801|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6326|TSSclassifier=S|UniProt=|association_with_transcript=11bp_to_DQ426879_5end|coexpression_cluster_id=C40|description=CAGE_peak_18_at_KIFC3_5end|id=chr16:57880444..57880457,-|ontology_enrichment_celltype=CL:0000064!1.97e-11!3;CL:0005012!1.97e-11!3;CL:0000067!1.97e-11!3;CL:0002304!1.97e-11!3|ontology_enrichment_celltype_v019=CL:0000333;6.55e-08;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;2.07e-12;3|ontology_enrichment_disease=DOID:171!6.00e-08!10|ontology_enrichment_disease_v019=DOID:169;8.48e-07;6|ontology_enrichment_disease_v019_2=DOID:169,8.48e-07,6|ontology_enrichment_uberon=UBERON:0001905!1.16e-17!2;UBERON:0002757!1.16e-17!2;UBERON:0010134!1.16e-17!2;UBERON:0002784!1.16e-17!2;UBERON:0005408!1.16e-17!2;UBERON:0001899!1.16e-17!2;UBERON:0001778!1.97e-11!3;UBERON:0001775!1.97e-11!3;UBERON:0000970!6.23e-10!20;UBERON:0002104!1.89e-09!21;UBERON:0003296!2.77e-09!4;UBERON:0010133!2.77e-09!4;UBERON:0000488!8.54e-09!4;UBERON:0000020!1.30e-08!23;UBERON:0001032!3.03e-08!24;UBERON:0004456!3.03e-08!24;UBERON:0007625!6.18e-07!11;UBERON:0000019!6.89e-07!19;UBERON:0000047!6.89e-07!19;UBERON:0004088!6.89e-07!19;UBERON:0003072!6.89e-07!19;UBERON:0003071!6.89e-07!19;UBERON:0004128!6.89e-07!19|ontology_enrichment_uberon_v019=UBERON:0001905;5.53e-66;2!UBERON:0002757;5.53e-66;2!UBERON:0010134;5.53e-66;2!UBERON:0005408;5.53e-66;2!UBERON:0001899;5.53e-66;2!UBERON:0003296;1.17e-33;4!UBERON:0010133;1.17e-33;4!UBERON:0002784;1.17e-33;4!UBERON:0001894;9.49e-20;7!UBERON:0000966;5.73e-08;5!UBERON:0005388;5.73e-08;5!UBERON:0001802;5.73e-08;5!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5!UBERON:0000970;1.17e-07;20!UBERON:0002104;2.44e-07;21!UBERON:0000020;8.87e-07;23|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.53e-66,2;UBERON:0002757,5.53e-66,2;UBERON:0010134,5.53e-66,2;UBERON:0005408,5.53e-66,2;UBERON:0001899,5.53e-66,2;UBERON:0003296,1.17e-33,4;UBERON:0010133,1.17e-33,4;UBERON:0002784,1.17e-33,4;UBERON:0001894,9.49e-20,7;UBERON:0006222,9.49e-20,7;UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5;UBERON:0000970,2.44e-07,21;UBERON:0002104,2.44e-07,21;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,2.91604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.621094816685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77438260454151,0,0.33946505990805,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,6.05310699993883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79161493372873,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p18@KIFC3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6326 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=11bp_to_DQ426879_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_18_at_KIFC3_5end | |||
|id=chr16:57880444..57880457,- | |||
|ontology_enrichment_celltype=CL:0000064!1.97e-11!3;CL:0005012!1.97e-11!3;CL:0000067!1.97e-11!3;CL:0002304!1.97e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.07e-12;3 | |||
|ontology_enrichment_disease=DOID:171!6.00e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:169;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.16e-17!2;UBERON:0002757!1.16e-17!2;UBERON:0010134!1.16e-17!2;UBERON:0002784!1.16e-17!2;UBERON:0005408!1.16e-17!2;UBERON:0001899!1.16e-17!2;UBERON:0001778!1.97e-11!3;UBERON:0001775!1.97e-11!3;UBERON:0000970!6.23e-10!20;UBERON:0002104!1.89e-09!21;UBERON:0003296!2.77e-09!4;UBERON:0010133!2.77e-09!4;UBERON:0000488!8.54e-09!4;UBERON:0000020!1.30e-08!23;UBERON:0001032!3.03e-08!24;UBERON:0004456!3.03e-08!24;UBERON:0007625!6.18e-07!11;UBERON:0000019!6.89e-07!19;UBERON:0000047!6.89e-07!19;UBERON:0004088!6.89e-07!19;UBERON:0003072!6.89e-07!19;UBERON:0003071!6.89e-07!19;UBERON:0004128!6.89e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.53e-66;2!UBERON:0002757;5.53e-66;2!UBERON:0010134;5.53e-66;2!UBERON:0005408;5.53e-66;2!UBERON:0001899;5.53e-66;2!UBERON:0003296;1.17e-33;4!UBERON:0010133;1.17e-33;4!UBERON:0002784;1.17e-33;4!UBERON:0001894;9.49e-20;7!UBERON:0000966;5.73e-08;5!UBERON:0005388;5.73e-08;5!UBERON:0001802;5.73e-08;5!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5!UBERON:0000970;1.17e-07;20!UBERON:0002104;2.44e-07;21!UBERON:0000020;8.87e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.53e-66,2;UBERON:0002757,5.53e-66,2;UBERON:0010134,5.53e-66,2;UBERON:0005408,5.53e-66,2;UBERON:0001899,5.53e-66,2;UBERON:0003296,1.17e-33,4;UBERON:0010133,1.17e-33,4;UBERON:0002784,1.17e-33,4;UBERON:0001894,9.49e-20,7;UBERON:0006222,9.49e-20,7;UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5;UBERON:0000970,2.44e-07,21;UBERON:0002104,2.44e-07,21;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,2.91604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.621094816685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77438260454151,0,0.33946505990805,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,6.05310699993883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79161493372873,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@KIFC3 | |||
}} |
Revision as of 10:56, 11 September 2013
Short description: | p18@KIFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_KIFC3_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 11bp_to_DQ426879_5end |
EntrezGene: | KIFC3 |
HGNC: | 6326 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.53e-66 | 2 |
regional part of epithalamus | 5.53e-66 | 2 |
secretory circumventricular organ | 5.53e-66 | 2 |
circumventricular organ | 5.53e-66 | 2 |
epithalamus | 5.53e-66 | 2 |
gland of diencephalon | 1.17e-33 | 4 |
neuroendocrine gland | 1.17e-33 | 4 |
regional part of diencephalon | 1.17e-33 | 4 |
diencephalon | 9.49e-20 | 7 |
future diencephalon | 9.49e-20 | 7 |
sympathetic nervous system | 6.55e-08 | 5 |
autonomic nervous system | 6.55e-08 | 5 |
eye | 2.44e-07 | 21 |
visual system | 2.44e-07 | 21 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.48e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.