FFCP PHASE1:Hg19::chr17:55163280..55163297,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8165|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=367|TSSclassifier=S|UniProt=Q92667|association_with_transcript=202bp_to_NM_001242903_5end|coexpression_cluster_id=C579|description=CAGE_peak_14_at_AKAP1_5end|id=chr17:55163280..55163297,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;4.34e-24;12!CL:0002563;9.47e-13;4!CL:0002253;4.83e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,4.67e-24,12;CL:0002563,8.17e-13,4;CL:0000223,5.35e-12,58;CL:0002253,4.17e-07,2|ontology_enrichment_development_v019=UBERON:0004161;4.12e-17;11!UBERON:0009497;1.59e-14;13!UBERON:0003104;2.88e-09;31!CL:0000223;5.24e-08;58|ontology_enrichment_disease=DOID:305!3.63e-07!106|ontology_enrichment_disease_v019=DOID:3493;4.83e-07;2|ontology_enrichment_disease_v019_2=DOID:3493,5.60e-07,2|ontology_enrichment_uberon=UBERON:0001007!1.27e-15!155;UBERON:0001555!1.27e-15!155;UBERON:0007026!1.27e-15!155;UBERON:0004921!9.41e-15!129;UBERON:0004185!9.41e-15!129;UBERON:0004119!6.99e-14!169;UBERON:0000925!6.99e-14!169;UBERON:0006595!6.99e-14!169;UBERON:0007023!7.16e-13!115;UBERON:0000077!3.21e-09!130;UBERON:0005911!2.75e-08!82;UBERON:0000481!3.26e-08!347;UBERON:0000062!7.28e-08!511;UBERON:0005409!1.86e-07!35|ontology_enrichment_uberon_v019=UBERON:0000160;6.28e-52;17!UBERON:0005409;1.87e-40;22!UBERON:0000059;9.59e-27;11!UBERON:0004921;9.43e-26;33!UBERON:0002108;7.28e-22;4!UBERON:0001155;3.95e-21;9!UBERON:0002107;3.17e-15;19!UBERON:0006925;3.17e-15;19!UBERON:0001007;4.47e-13;81!UBERON:0001052;9.47e-13;4!UBERON:0001242;9.47e-13;4!UBERON:0001262;9.47e-13;4!UBERON:0004786;9.47e-13;4!UBERON:0004808;9.47e-13;4!UBERON:0001277;9.47e-13;4!UBERON:0002423;1.46e-11;25!UBERON:0004907;2.19e-10;5!UBERON:0001555;6.07e-10;54!UBERON:0002365;5.55e-09;31!UBERON:0002330;5.55e-09;31!UBERON:0002368;2.38e-08;33!UBERON:0000485;1.15e-07;7!UBERON:0003929;1.15e-07;7!UBERON:0003350;8.23e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.93e-52,17;UBERON:0005409,1.06e-35,25;UBERON:0000059,8.17e-27,11;UBERON:0002108,8.40e-22,4;UBERON:0001155,3.56e-21,9;UBERON:0004921,2.85e-20,118;UBERON:0001007,3.57e-16,145;UBERON:0001555,3.57e-16,145;UBERON:0007026,3.57e-16,145;UBERON:0002107,3.32e-15,19;UBERON:0006925,3.32e-15,19;UBERON:0008836,3.32e-15,19;UBERON:0004119,1.73e-14,160;UBERON:0000925,1.73e-14,160;UBERON:0006595,1.73e-14,160;UBERON:0008835,3.96e-13,22;UBERON:0003894,3.96e-13,22;UBERON:0003929,6.00e-13,54;UBERON:0001052,7.70e-13,4;UBERON:0001242,8.17e-13,4;UBERON:0001262,8.17e-13,4;UBERON:0004786,8.17e-13,4;UBERON:0004808,8.17e-13,4;UBERON:0001277,8.17e-13,4;UBERON:0009854,1.48e-12,23;UBERON:0007499,1.51e-11,25;UBERON:0009497,1.51e-11,25;UBERON:0000015,1.51e-11,25;UBERON:0002423,1.51e-11,25;UBERON:0006235,1.51e-11,25;UBERON:0004161,1.51e-11,25;UBERON:0011216,2.82e-11,223;UBERON:0009856,4.21e-11,26;UBERON:0004907,1.86e-10,5;UBERON:0002365,2.67e-09,31;UBERON:0002330,2.67e-09,31;UBERON:0005911,3.11e-08,82;UBERON:0002368,3.17e-08,35;UBERON:0003350,7.66e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,4.42758378755209,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0.828851746593443,0.503865495708552,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,2.98578579323551,3.27292988662355,3.05515072466813,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,3.62972148145992,0,0.126373159256976,0.300646838828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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=367 | |||
|TSSclassifier=S | |||
|UniProt=Q92667 | |||
|association_with_transcript=202bp_to_NM_001242903_5end | |||
|coexpression_cluster_id=C579 | |||
|description=CAGE_peak_14_at_AKAP1_5end | |||
|id=chr17:55163280..55163297,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.34e-24;12!CL:0002563;9.47e-13;4!CL:0002253;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.67e-24,12;CL:0002563,8.17e-13,4;CL:0000223,5.35e-12,58;CL:0002253,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.12e-17;11!UBERON:0009497;1.59e-14;13!UBERON:0003104;2.88e-09;31!CL:0000223;5.24e-08;58 | |||
|ontology_enrichment_disease=DOID:305!3.63e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.60e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.27e-15!155;UBERON:0001555!1.27e-15!155;UBERON:0007026!1.27e-15!155;UBERON:0004921!9.41e-15!129;UBERON:0004185!9.41e-15!129;UBERON:0004119!6.99e-14!169;UBERON:0000925!6.99e-14!169;UBERON:0006595!6.99e-14!169;UBERON:0007023!7.16e-13!115;UBERON:0000077!3.21e-09!130;UBERON:0005911!2.75e-08!82;UBERON:0000481!3.26e-08!347;UBERON:0000062!7.28e-08!511;UBERON:0005409!1.86e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.28e-52;17!UBERON:0005409;1.87e-40;22!UBERON:0000059;9.59e-27;11!UBERON:0004921;9.43e-26;33!UBERON:0002108;7.28e-22;4!UBERON:0001155;3.95e-21;9!UBERON:0002107;3.17e-15;19!UBERON:0006925;3.17e-15;19!UBERON:0001007;4.47e-13;81!UBERON:0001052;9.47e-13;4!UBERON:0001242;9.47e-13;4!UBERON:0001262;9.47e-13;4!UBERON:0004786;9.47e-13;4!UBERON:0004808;9.47e-13;4!UBERON:0001277;9.47e-13;4!UBERON:0002423;1.46e-11;25!UBERON:0004907;2.19e-10;5!UBERON:0001555;6.07e-10;54!UBERON:0002365;5.55e-09;31!UBERON:0002330;5.55e-09;31!UBERON:0002368;2.38e-08;33!UBERON:0000485;1.15e-07;7!UBERON:0003929;1.15e-07;7!UBERON:0003350;8.23e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.93e-52,17;UBERON:0005409,1.06e-35,25;UBERON:0000059,8.17e-27,11;UBERON:0002108,8.40e-22,4;UBERON:0001155,3.56e-21,9;UBERON:0004921,2.85e-20,118;UBERON:0001007,3.57e-16,145;UBERON:0001555,3.57e-16,145;UBERON:0007026,3.57e-16,145;UBERON:0002107,3.32e-15,19;UBERON:0006925,3.32e-15,19;UBERON:0008836,3.32e-15,19;UBERON:0004119,1.73e-14,160;UBERON:0000925,1.73e-14,160;UBERON:0006595,1.73e-14,160;UBERON:0008835,3.96e-13,22;UBERON:0003894,3.96e-13,22;UBERON:0003929,6.00e-13,54;UBERON:0001052,7.70e-13,4;UBERON:0001242,8.17e-13,4;UBERON:0001262,8.17e-13,4;UBERON:0004786,8.17e-13,4;UBERON:0004808,8.17e-13,4;UBERON:0001277,8.17e-13,4;UBERON:0009854,1.48e-12,23;UBERON:0007499,1.51e-11,25;UBERON:0009497,1.51e-11,25;UBERON:0000015,1.51e-11,25;UBERON:0002423,1.51e-11,25;UBERON:0006235,1.51e-11,25;UBERON:0004161,1.51e-11,25;UBERON:0011216,2.82e-11,223;UBERON:0009856,4.21e-11,26;UBERON:0004907,1.86e-10,5;UBERON:0002365,2.67e-09,31;UBERON:0002330,2.67e-09,31;UBERON:0005911,3.11e-08,82;UBERON:0002368,3.17e-08,35;UBERON:0003350,7.66e-07,8 | |||
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|short_description=p14@AKAP1 | |||
}} |
Revision as of 14:43, 11 September 2013
Short description: | p14@AKAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_AKAP1_5end |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | 202bp_to_NM_001242903_5end |
EntrezGene: | AKAP1 |
HGNC: | 367 |
UniProt: | Q92667 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.67e-24 | 12 |
intestinal epithelial cell | 8.17e-13 | 4 |
endodermal cell | 5.35e-12 | 58 |
epithelial cell of large intestine | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.60e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.