FFCP PHASE1:Hg19::chr18:29598595..29598601,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54941|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21150|TSSclassifier=S|UniProt=Q96EQ8|association_with_transcript=150bp_to_NM_017831,uc002kxf.1_5end|description=CAGE_peak_9_at_RNF125_5end|id=chr18:29598595..29598601,+|ontology_enrichment_celltype=CL:0002322!2.63e-07!5|ontology_enrichment_celltype_v019=CL:0002322;7.01e-22;5!CL:0000097;2.58e-10;5!CL:0000540;9.62e-09;6!CL:0000404;9.62e-09;6!CL:0000039;9.71e-08;7!CL:0000586;9.71e-08;7!CL:0002321;1.13e-07;15!CL:0001014;3.69e-07;2!CL:0001016;3.69e-07;2|ontology_enrichment_celltype_v019_2=CL:0002322,5.48e-22,5;CL:0000097,4.73e-10,5;CL:0002028,4.73e-10,5;CL:0000540,9.27e-09,6;CL:0000031,9.27e-09,6;CL:0000404,9.27e-09,6;CL:0000039,7.55e-08,7;CL:0000586,7.55e-08,7;CL:0001014,2.58e-07,2;CL:0001016,2.58e-07,2;CL:0000047,8.85e-07,8|ontology_enrichment_development_v019=CL:0000031;9.62e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4074;3.69e-07;2!DOID:4905;3.69e-07;2!DOID:1909;3.69e-07;2!DOID:3498;3.69e-07;2|ontology_enrichment_disease_v019_2=DOID:4074,3.28e-07,2;DOID:4905,3.28e-07,2;DOID:3498,3.28e-07,2;DOID:1909,4.17e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;7.11e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.71e-07,8|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0.590129310341499,0,0.411202997999018,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.443067789167242,0,0.384273959177026,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0,0,0.226618685395132,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.263504357079378,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.927708378250397,1.16193942869518,0.725627385107593,2.01856680700503,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.330881918197182,0.435758888184812,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0,0.492663237895943,0.880484340132261,1.03664057770386,1.00883967391873,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.560425719967636,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0,0.307007349452259,0.275673144969061,0.214840489736547,0,0.170453254832202,0.178064071293475,0.330569830721956,0,0,0.30347334256665,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,1.18504244461122,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.891547074219827,0.568272293612826,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0.432777279484182,0.995261931078505,0,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,1.21390189767046,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.219267951258557,0.410577285266046,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0.576219191952599,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.96451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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21150 | |||
|TSSclassifier=S | |||
|UniProt=Q96EQ8 | |||
|association_with_transcript=150bp_to_NM_017831,uc002kxf.1_5end | |||
|description=CAGE_peak_9_at_RNF125_5end | |||
|id=chr18:29598595..29598601,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.63e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.01e-22;5!CL:0000097;2.58e-10;5!CL:0000540;9.62e-09;6!CL:0000404;9.62e-09;6!CL:0000039;9.71e-08;7!CL:0000586;9.71e-08;7!CL:0002321;1.13e-07;15!CL:0001014;3.69e-07;2!CL:0001016;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.48e-22,5;CL:0000097,4.73e-10,5;CL:0002028,4.73e-10,5;CL:0000540,9.27e-09,6;CL:0000031,9.27e-09,6;CL:0000404,9.27e-09,6;CL:0000039,7.55e-08,7;CL:0000586,7.55e-08,7;CL:0001014,2.58e-07,2;CL:0001016,2.58e-07,2;CL:0000047,8.85e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;9.62e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;3.69e-07;2!DOID:4905;3.69e-07;2!DOID:1909;3.69e-07;2!DOID:3498;3.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,3.28e-07,2;DOID:4905,3.28e-07,2;DOID:3498,3.28e-07,2;DOID:1909,4.17e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.11e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.71e-07,8 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0.590129310341499,0,0.411202997999018,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.443067789167242,0,0.384273959177026,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0,0,0.226618685395132,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.263504357079378,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.927708378250397,1.16193942869518,0.725627385107593,2.01856680700503,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.330881918197182,0.435758888184812,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0,0.492663237895943,0.880484340132261,1.03664057770386,1.00883967391873,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.560425719967636,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0,0.307007349452259,0.275673144969061,0.214840489736547,0,0.170453254832202,0.178064071293475,0.330569830721956,0,0,0.30347334256665,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,1.18504244461122,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.891547074219827,0.568272293612826,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0.432777279484182,0.995261931078505,0,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,1.21390189767046,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.219267951258557,0.410577285266046,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0.576219191952599,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.964518890790115,1.10031549277787,1.24632101408756,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0,1.08803560673895,0,0.612691153526923,0.655745261419609,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,1.14186133417987,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0.558644917973244,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0,0,0,0.261906694481422,0,0.739280431085226,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.236387681767936,0.222462803784138,0,0,0,0.913158720509496,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0.691259661814092,0,0.354996002191696,0.340853619036631,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.45178432815584,0,0.301925687133347,0.154348316215889,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0.199882311849858,0,1.05868461514708,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.546327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| |||
|short_description=p9@RNF125 | |||
}} |
Revision as of 17:14, 11 September 2013
Short description: | p9@RNF125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RNF125_5end |
Coexpression cluster: | NA |
Association with transcript: | 150bp_to_NM_017831, uc002kxf.1_5end |
EntrezGene: | RNF125 |
HGNC: | 21150 |
UniProt: | Q96EQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.48e-22 | 5 |
mast cell | 4.73e-10 | 5 |
basophil mast progenitor cell | 4.73e-10 | 5 |
neuron | 9.27e-09 | 6 |
neuroblast | 9.27e-09 | 6 |
electrically signaling cell | 9.27e-09 | 6 |
germ line cell | 7.55e-08 | 7 |
germ cell | 7.55e-08 | 7 |
CD1a-positive Langerhans cell | 2.58e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.58e-07 | 2 |
neuronal stem cell | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 5.71e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 3.28e-07 | 2 |
pancreatic carcinoma | 3.28e-07 | 2 |
pancreatic ductal adenocarcinoma | 3.28e-07 | 2 |
melanoma | 4.17e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.