FFCP PHASE1:Hg19::chr19:7703985..7703989,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6813|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11445|TSSclassifier=N|UniProt=F5H146|association_with_transcript=-153bp_to_ENST00000320400_5end|description=CAGE_peak_4_at_STXBP2_5end|id=chr19:7703985..7703989,+|ontology_enrichment_celltype=CL:0000988!7.17e-07!182|ontology_enrichment_celltype_v019=CL:0000771;5.48e-18;2!CL:0000094;1.33e-17;8!CL:1000507;3.97e-14;10!CL:1000494;3.97e-14;10!CL:0000081;4.25e-13;11!CL:0000775;2.31e-12;3!CL:1000449;9.24e-10;15!CL:1000497;1.00e-08;17!CL:0002518;1.00e-08;17!CL:0000312;7.01e-08;5!CL:0000240;8.97e-07;6!CL:0000311;8.97e-07;6!CL:0000079;8.97e-07;6!CL:0000237;8.97e-07;6|ontology_enrichment_celltype_v019_2=CL:0000771,5.48e-18,2;CL:0000094,1.33e-17,8;CL:1000507,3.71e-14,10;CL:1000494,3.71e-14,10;CL:0000081,4.25e-13,11;CL:0000775,2.31e-12,3;CL:1000449,8.85e-10,15;CL:1000497,9.62e-09,17;CL:0002518,9.62e-09,17;CL:0000312,7.49e-08,5;CL:0000240,9.49e-07,6;CL:0000311,9.49e-07,6;CL:0000079,9.49e-07,6;CL:0000237,9.49e-07,6;CL:0000036,9.49e-07,6;CL:0000357,9.49e-07,6;CL:0000114,9.49e-07,6|ontology_enrichment_development_v019=CL:0000357;8.97e-07;6!CL:0000114;8.97e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.69e-07!12|ontology_enrichment_uberon_v019=UBERON:0004211;3.97e-14;10!UBERON:0009773;3.97e-14;10!UBERON:0001231;3.97e-14;10!UBERON:0004810;3.97e-14;10!UBERON:0006555;9.24e-10;15!UBERON:0004819;9.24e-10;15!UBERON:0001285;9.24e-10;15!UBERON:0007684;9.24e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.71e-14,10;UBERON:0004211,8.85e-10,15;UBERON:0009773,8.85e-10,15;UBERON:0001231,8.85e-10,15;UBERON:0001285,8.85e-10,15;UBERON:0007684,8.85e-10,15;UBERON:0004208,8.85e-10,15;UBERON:0006555,3.14e-09,16;UBERON:0004819,3.14e-09,16|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0.589211814949674,0,0,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0.785874452986276,0.364295288292542,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,7.75560528296651,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,1.1240175325762,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.766765358330422,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,2.99602809578873,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0.182091168006717,0,1.80479845162965,0.231046011313244,0.784349769176855,1.46139224653261,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0.657779629937804,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.317873157960757,0.210998064528027,0.489698424477443,0.424059214301822,0,0,0,0,0.296521128680622,0,0.208843899010911,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0.264768380074501,0,0,0,0,0.586654148204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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6813 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11445 | |||
|TSSclassifier=N | |||
|UniProt=F5H146 | |||
|association_with_transcript=-153bp_to_ENST00000320400_5end | |||
|description=CAGE_peak_4_at_STXBP2_5end | |||
|id=chr19:7703985..7703989,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.17e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000771;5.48e-18;2!CL:0000094;1.33e-17;8!CL:1000507;3.97e-14;10!CL:1000494;3.97e-14;10!CL:0000081;4.25e-13;11!CL:0000775;2.31e-12;3!CL:1000449;9.24e-10;15!CL:1000497;1.00e-08;17!CL:0002518;1.00e-08;17!CL:0000312;7.01e-08;5!CL:0000240;8.97e-07;6!CL:0000311;8.97e-07;6!CL:0000079;8.97e-07;6!CL:0000237;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,5.48e-18,2;CL:0000094,1.33e-17,8;CL:1000507,3.71e-14,10;CL:1000494,3.71e-14,10;CL:0000081,4.25e-13,11;CL:0000775,2.31e-12,3;CL:1000449,8.85e-10,15;CL:1000497,9.62e-09,17;CL:0002518,9.62e-09,17;CL:0000312,7.49e-08,5;CL:0000240,9.49e-07,6;CL:0000311,9.49e-07,6;CL:0000079,9.49e-07,6;CL:0000237,9.49e-07,6;CL:0000036,9.49e-07,6;CL:0000357,9.49e-07,6;CL:0000114,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;8.97e-07;6!CL:0000114;8.97e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.69e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.97e-14;10!UBERON:0009773;3.97e-14;10!UBERON:0001231;3.97e-14;10!UBERON:0004810;3.97e-14;10!UBERON:0006555;9.24e-10;15!UBERON:0004819;9.24e-10;15!UBERON:0001285;9.24e-10;15!UBERON:0007684;9.24e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.71e-14,10;UBERON:0004211,8.85e-10,15;UBERON:0009773,8.85e-10,15;UBERON:0001231,8.85e-10,15;UBERON:0001285,8.85e-10,15;UBERON:0007684,8.85e-10,15;UBERON:0004208,8.85e-10,15;UBERON:0006555,3.14e-09,16;UBERON:0004819,3.14e-09,16 | |||
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|short_description=p4@STXBP2 | |||
}} |
Revision as of 22:55, 11 September 2013
Short description: | p4@STXBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_STXBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -153bp_to_ENST00000320400_5end |
EntrezGene: | STXBP2 |
HGNC: | 11445 |
UniProt: | F5H146 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 5.48e-18 | 2 |
granulocyte | 1.33e-17 | 8 |
kidney tubule cell | 3.71e-14 | 10 |
nephron tubule epithelial cell | 3.71e-14 | 10 |
blood cell | 4.25e-13 | 11 |
neutrophil | 2.31e-12 | 3 |
epithelial cell of nephron | 8.85e-10 | 15 |
kidney cell | 9.62e-09 | 17 |
kidney epithelial cell | 9.62e-09 | 17 |
keratinocyte | 7.49e-08 | 5 |
stratified squamous epithelial cell | 9.49e-07 | 6 |
keratin accumulating cell | 9.49e-07 | 6 |
stratified epithelial cell | 9.49e-07 | 6 |
keratinizing barrier epithelial cell | 9.49e-07 | 6 |
epithelial fate stem cell | 9.49e-07 | 6 |
stratified epithelial stem cell | 9.49e-07 | 6 |
surface ectodermal cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.71e-14 | 10 |
nephron epithelium | 8.85e-10 | 15 |
renal tubule | 8.85e-10 | 15 |
nephron tubule | 8.85e-10 | 15 |
nephron | 8.85e-10 | 15 |
uriniferous tubule | 8.85e-10 | 15 |
nephrogenic mesenchyme | 8.85e-10 | 15 |
excretory tube | 3.14e-09 | 16 |
kidney epithelium | 3.14e-09 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.