FFCP PHASE1:Hg19::chr19:49105940..49105943,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:49105940..49105943,-|id=chr19:49105940..49105943,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!2.86e-23!235;DOID:14566!2.37e-22!239;DOID:0050687!5.55e-21!143;DOID:305!1.31e-17!106;DOID:3119!2.81e-13!14;DOID:0050686!1.24e-11!137;DOID:299!1.41e-10!25|ontology_enrichment_disease_v019=DOID:4231;6.30e-26;2!DOID:1907;6.30e-26;2!DOID:201;1.38e-09;6!DOID:0060100;1.38e-09;6!DOID:1036;1.64e-07;8|ontology_enrichment_disease_v019_2=DOID:4231,9.18e-26,2;DOID:1907,9.18e-26,2;DOID:201,1.57e-09,6;DOID:0060100,1.57e-09,6;DOID:1036,1.69e-07,8|ontology_enrichment_uberon=UBERON:0005409!6.67e-10!35;UBERON:0001052!9.90e-08!4;UBERON:0000160!6.25e-07!27|ontology_enrichment_uberon_v019=UBERON:0003343;1.06e-13;4!UBERON:0004785;1.06e-13;4!UBERON:0000974;1.38e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.00e-13,4;UBERON:0004785,1.00e-13,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.355709216742071,0.159426272728822,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0.445773537109913,0.284136146806413,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0.503865495708552,0,0.246169610922139,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,1.74962768029953,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,1.27149263184303,0,0.489698424477443,0.141353071433941,0.216388639742091,0,0,0.611030144933625,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0.364909578431332,0.978323094660449,0,0.394584402849391,0,0,0.063186579628488,0,0,0.664653872707185,0.661983911750998,0,0,0.569219092059585,0,0,0.587954384486266,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.586654148204409,0.961905843018405,0,0.19980960958213,0.144090417154106,0.114536596165916,0,0.576219191952599,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0.739202355635845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0.19998739585493,0,0,0,1.10463570151104,0,0,0,0,0.314531883711793,0.327628914576042,0,0.212574920101683,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.392590874004102,1.65157612686837,0,0,0,0,0,0,0,0,0,0.49131575253029,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.560544326627578,0.913158720509496,0.215927591218621,0,0,0,0.581207126840626,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0.196300467230486,0.243835849964539,0,0,0,0,0,0.397901550322736,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0.126166424835079,0.327796715891087,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0.641136984606466|short_description=p@chr19:49105940..49105943,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:49105940..49105943,- | |||
|id=chr19:49105940..49105943,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.86e-23!235;DOID:14566!2.37e-22!239;DOID:0050687!5.55e-21!143;DOID:305!1.31e-17!106;DOID:3119!2.81e-13!14;DOID:0050686!1.24e-11!137;DOID:299!1.41e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:4231;6.30e-26;2!DOID:1907;6.30e-26;2!DOID:201;1.38e-09;6!DOID:0060100;1.38e-09;6!DOID:1036;1.64e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,9.18e-26,2;DOID:1907,9.18e-26,2;DOID:201,1.57e-09,6;DOID:0060100,1.57e-09,6;DOID:1036,1.69e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.67e-10!35;UBERON:0001052!9.90e-08!4;UBERON:0000160!6.25e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.06e-13;4!UBERON:0004785;1.06e-13;4!UBERON:0000974;1.38e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.00e-13,4;UBERON:0004785,1.00e-13,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.355709216742071,0.159426272728822,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0.445773537109913,0.284136146806413,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0.503865495708552,0,0.246169610922139,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,1.74962768029953,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,1.27149263184303,0,0.489698424477443,0.141353071433941,0.216388639742091,0,0,0.611030144933625,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0.364909578431332,0.978323094660449,0,0.394584402849391,0,0,0.063186579628488,0,0,0.664653872707185,0.661983911750998,0,0,0.569219092059585,0,0,0.587954384486266,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.586654148204409,0.961905843018405,0,0.19980960958213,0.144090417154106,0.114536596165916,0,0.576219191952599,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0.739202355635845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0.19998739585493,0,0,0,1.10463570151104,0,0,0,0,0.314531883711793,0.327628914576042,0,0.212574920101683,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.392590874004102,1.65157612686837,0,0,0,0,0,0,0,0,0,0.49131575253029,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.560544326627578,0.913158720509496,0.215927591218621,0,0,0,0.581207126840626,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0.196300467230486,0.243835849964539,0,0,0,0,0,0.397901550322736,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0.126166424835079,0.327796715891087,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr19:49105940..49105943,- | |||
}} |
Revision as of 21:38, 11 September 2013
Short description: | p@chr19:49105940..49105943, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:49105940..49105943, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.00e-13 | 4 |
respiratory system mucosa | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 9.18e-26 | 2 |
malignant fibroxanthoma | 9.18e-26 | 2 |
connective tissue cancer | 1.57e-09 | 6 |
musculoskeletal system cancer | 1.57e-09 | 6 |
chronic leukemia | 1.69e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.