FFCP PHASE1:Hg19::chr19:51412626..51412645,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9622|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6365|TSSclassifier=S|UniProt=Q96JD7|association_with_transcript=5bp_to_uc010eoi.1_5end|coexpression_cluster_id=C249|description=CAGE_peak_1_at_KLK4_5end|id=chr19:51412626..51412645,-|ontology_enrichment_celltype=CL:0002322!1.79e-08!5|ontology_enrichment_celltype_v019=CL:0002553;7.40e-11;1!CL:0000167;1.08e-10;1!CL:0000164;1.08e-10;1!CL:0000502;1.08e-10;1!CL:0000172;1.08e-10;1!CL:0000173;1.08e-10;1|ontology_enrichment_celltype_v019_2=CL:0002553,7.40e-11,1;CL:0000167,1.08e-10,1;CL:0000164,1.08e-10,1;CL:0000502,1.08e-10,1;CL:0000172,1.08e-10,1;CL:0000173,1.08e-10,1;CL:0002351,1.08e-10,1|ontology_enrichment_development_v019=UBERON:0007297;1.80e-19;2!CL:0002351;1.08e-10;1!UBERON:0006298;1.81e-10;1!UBERON:0005754;1.81e-10;1!UBERON:0004874;3.29e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;1.08e-10;1|ontology_enrichment_disease_v019_2=DOID:4430,1.08e-10,1|ontology_enrichment_uberon=UBERON:0007023!8.24e-18!115;UBERON:0002298!1.37e-07!8;UBERON:0006947!2.53e-07!3;UBERON:0004054!2.53e-07!3|ontology_enrichment_uberon_v019=UBERON:0006947;2.85e-28;3!UBERON:0004054;2.85e-28;3!UBERON:0005904;2.24e-21;4!UBERON:0003135;1.57e-13;11!UBERON:0001301;9.38e-11;1!UBERON:0004175;1.05e-10;21!UBERON:0001000;1.37e-10;1!UBERON:0005352;1.37e-10;1!UBERON:0000998;1.81e-10;1!UBERON:0001736;1.81e-10;1!UBERON:0006868;1.81e-10;1!UBERON:0003101;2.33e-10;22!UBERON:0000079;2.33e-10;22!UBERON:0006834;3.29e-10;1!UBERON:0000989;3.29e-10;1!UBERON:0008811;3.29e-10;1!UBERON:0000058;6.95e-09;10!UBERON:0001044;4.95e-07;6!UBERON:0003293;4.95e-07;6!UBERON:0003294;4.95e-07;6!UBERON:0010047;4.95e-07;6!UBERON:0003408;4.95e-07;6!UBERON:0000167;4.95e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.72e-28,3;UBERON:0004054,2.72e-28,3;UBERON:0005904,2.17e-21,4;UBERON:0003135,1.54e-13,11;UBERON:0007023,3.36e-13,114;UBERON:0001301,8.95e-11,1;UBERON:0001000,1.30e-10,1;UBERON:0005352,1.30e-10,1;UBERON:0001736,1.73e-10,1;UBERON:0006298,1.73e-10,1;UBERON:0000998,1.89e-10,1;UBERON:0006868,1.89e-10,1;UBERON:0003101,2.31e-10,22;UBERON:0000079,2.31e-10,22;UBERON:0000989,3.29e-10,1;UBERON:0008811,3.29e-10,1;UBERON:0006258,3.29e-10,1;UBERON:0005876,3.29e-10,1;UBERON:0004874,3.29e-10,1;UBERON:0006834,3.61e-10,1;UBERON:0004175,5.59e-09,25;UBERON:0004876,5.09e-08,11;UBERON:0001044,4.95e-07,6;UBERON:0003293,4.95e-07,6;UBERON:0003294,4.95e-07,6;UBERON:0010047,4.95e-07,6;UBERON:0000167,4.95e-07,6;UBERON:0005156,7.72e-07,59;UBERON:0000990,7.72e-07,59|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.72038491523742,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,1.52795370223311,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.561320188866147,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0.221158519862449,0,0,0,0.557694977114413,1.53900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.32686346755009,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,3.55125962564451,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.979923974143776,0,8.38688007561745,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0.550157746388935,0.415440338029185,0,0,0.425246896606173,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94232457750140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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9622 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6365 | |||
|TSSclassifier=S | |||
|UniProt=Q96JD7 | |||
|association_with_transcript=5bp_to_uc010eoi.1_5end | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_1_at_KLK4_5end | |||
|id=chr19:51412626..51412645,- | |||
|ontology_enrichment_celltype=CL:0002322!1.79e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002553;7.40e-11;1!CL:0000167;1.08e-10;1!CL:0000164;1.08e-10;1!CL:0000502;1.08e-10;1!CL:0000172;1.08e-10;1!CL:0000173;1.08e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.40e-11,1;CL:0000167,1.08e-10,1;CL:0000164,1.08e-10,1;CL:0000502,1.08e-10,1;CL:0000172,1.08e-10,1;CL:0000173,1.08e-10,1;CL:0002351,1.08e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.80e-19;2!CL:0002351;1.08e-10;1!UBERON:0006298;1.81e-10;1!UBERON:0005754;1.81e-10;1!UBERON:0004874;3.29e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.08e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.08e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.24e-18!115;UBERON:0002298!1.37e-07!8;UBERON:0006947!2.53e-07!3;UBERON:0004054!2.53e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.85e-28;3!UBERON:0004054;2.85e-28;3!UBERON:0005904;2.24e-21;4!UBERON:0003135;1.57e-13;11!UBERON:0001301;9.38e-11;1!UBERON:0004175;1.05e-10;21!UBERON:0001000;1.37e-10;1!UBERON:0005352;1.37e-10;1!UBERON:0000998;1.81e-10;1!UBERON:0001736;1.81e-10;1!UBERON:0006868;1.81e-10;1!UBERON:0003101;2.33e-10;22!UBERON:0000079;2.33e-10;22!UBERON:0006834;3.29e-10;1!UBERON:0000989;3.29e-10;1!UBERON:0008811;3.29e-10;1!UBERON:0000058;6.95e-09;10!UBERON:0001044;4.95e-07;6!UBERON:0003293;4.95e-07;6!UBERON:0003294;4.95e-07;6!UBERON:0010047;4.95e-07;6!UBERON:0003408;4.95e-07;6!UBERON:0000167;4.95e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.72e-28,3;UBERON:0004054,2.72e-28,3;UBERON:0005904,2.17e-21,4;UBERON:0003135,1.54e-13,11;UBERON:0007023,3.36e-13,114;UBERON:0001301,8.95e-11,1;UBERON:0001000,1.30e-10,1;UBERON:0005352,1.30e-10,1;UBERON:0001736,1.73e-10,1;UBERON:0006298,1.73e-10,1;UBERON:0000998,1.89e-10,1;UBERON:0006868,1.89e-10,1;UBERON:0003101,2.31e-10,22;UBERON:0000079,2.31e-10,22;UBERON:0000989,3.29e-10,1;UBERON:0008811,3.29e-10,1;UBERON:0006258,3.29e-10,1;UBERON:0005876,3.29e-10,1;UBERON:0004874,3.29e-10,1;UBERON:0006834,3.61e-10,1;UBERON:0004175,5.59e-09,25;UBERON:0004876,5.09e-08,11;UBERON:0001044,4.95e-07,6;UBERON:0003293,4.95e-07,6;UBERON:0003294,4.95e-07,6;UBERON:0010047,4.95e-07,6;UBERON:0000167,4.95e-07,6;UBERON:0005156,7.72e-07,59;UBERON:0000990,7.72e-07,59 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.72038491523742,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,1.52795370223311,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.561320188866147,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0.221158519862449,0,0,0,0.557694977114413,1.53900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.32686346755009,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,3.55125962564451,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.979923974143776,0,8.38688007561745,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0.550157746388935,0.415440338029185,0,0,0.425246896606173,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0.573409195690071,0.221858103073705,0.434674820589684,0,0,0,0.856396000634902,0,0,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0.368211900503681,0.139879507719444,0,0,0,0.314531883711793,0,0,0,1.85903646388503,0,0,0,65.6468013594085,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0,0.115233987555779,0,0.339848664884159,0.131545547125698,0,0,75.1963829507924,0,0,0,0,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,3.44181887056222,0,0,2.54032230114557,0,0,0,0,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,9.51065914470043,0.154348316215889,0,0.470317296361523,0.490296643507811,6.83461986594715,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,2.75237570042724,0,0.157771562193185,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0.103432995861895,1.0661699095049,0,0,0,0,8.08318910132694,0.404234377916439,0,0,0,0.358611026963382,0,0,0,0,0,0,1.4668973301944,0.406896178315738,0,1.00636896795513,0.641136984606466 | |||
|short_description=p1@KLK4 | |||
}} |
Revision as of 22:00, 11 September 2013
Short description: | p1@KLK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KLK4_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 5bp_to_uc010eoi.1_5end |
EntrezGene: | KLK4 |
HGNC: | 6365 |
UniProt: | Q96JD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.40e-11 | 1 |
peptide hormone secreting cell | 1.08e-10 | 1 |
enteroendocrine cell | 1.08e-10 | 1 |
type D enteroendocrine cell | 1.08e-10 | 1 |
somatostatin secreting cell | 1.08e-10 | 1 |
pancreatic D cell | 1.08e-10 | 1 |
progenitor cell of endocrine pancreas | 1.08e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.72e-28 | 3 |
internal male genitalia | 2.72e-28 | 3 |
duct of male reproductive system | 2.17e-21 | 4 |
male reproductive organ | 1.54e-13 | 11 |
adult organism | 3.36e-13 | 114 |
epididymis | 8.95e-11 | 1 |
vas deferens | 1.30e-10 | 1 |
spermatic cord | 1.30e-10 | 1 |
submandibular gland | 1.73e-10 | 1 |
submandibular gland primordium | 1.73e-10 | 1 |
seminal vesicle | 1.89e-10 | 1 |
seminal fluid secreting gland | 1.89e-10 | 1 |
male organism | 2.31e-10 | 22 |
male reproductive system | 2.31e-10 | 22 |
penis | 3.29e-10 | 1 |
intromittent organ | 3.29e-10 | 1 |
lateral plate mesenchyme | 3.29e-10 | 1 |
undifferentiated genital tubercle | 3.29e-10 | 1 |
somatopleure | 3.29e-10 | 1 |
uterus or analog | 3.61e-10 | 1 |
internal genitalia | 5.59e-09 | 25 |
urogenital ridge | 5.09e-08 | 11 |
saliva-secreting gland | 4.95e-07 | 6 |
gland of oral region | 4.95e-07 | 6 |
gland of foregut | 4.95e-07 | 6 |
oral gland | 4.95e-07 | 6 |
oral cavity | 4.95e-07 | 6 |
reproductive structure | 7.72e-07 | 59 |
reproductive system | 7.72e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.08e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.