FFCP PHASE1:Hg19::chr2:128377550..128377603,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4648|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7607|TSSclassifier=S|UniProt=B9A063,C9JC21|association_with_transcript=0bp_to_ENST00000409090,ENST00000437387,ENST00000496841,uc002toq.1,uc002tor.1_5end|coexpression_cluster_id=C796|description=CAGE_peak_3_at_MYO7B_5end|id=chr2:128377550..128377603,+|ontology_enrichment_celltype=CL:0000236!1.64e-30!14;CL:0000945!2.38e-20!24;CL:0000826!2.38e-20!24;CL:0000838!1.00e-13!52;CL:0000542!2.09e-13!53;CL:0000051!2.09e-13!53;CL:0000842!6.76e-13!3;CL:0000224!8.49e-10!4|ontology_enrichment_celltype_v019=CL:0000236;1.87e-60;13!CL:0000945;2.74e-32;24!CL:0000542;1.51e-15;53!CL:0000817;4.01e-11;1|ontology_enrichment_celltype_v019_2=CL:0000236,3.62e-56,14;CL:0000945,2.41e-32,24;CL:0000826,2.41e-32,24;CL:0000838,1.12e-21,52;CL:0000542,3.06e-21,53;CL:0000051,3.06e-21,53;CL:0002087,8.11e-09,115;CL:0002031,2.20e-08,120;CL:0000738,3.29e-07,136|ontology_enrichment_development_v019=CL:0000051;1.51e-15;53!UBERON:0004872;1.26e-13;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!7.27e-11!7;UBERON:0001557!1.10e-07!19;UBERON:0002106!3.03e-07!3;UBERON:0004854!3.03e-07!3;UBERON:0009034!3.03e-07!3;UBERON:0002095!3.03e-07!3;UBERON:0004782!3.03e-07!3;UBERON:0003281!3.03e-07!3;UBERON:0009664!3.03e-07!3;UBERON:0002296!3.03e-07!3;UBERON:0005602!3.03e-07!3;UBERON:0001179!3.03e-07!3;UBERON:0006293!3.03e-07!3|ontology_enrichment_uberon_v019=UBERON:0004177;1.41e-32;5!UBERON:0005057;1.41e-32;5!UBERON:0002370;7.41e-21;2!UBERON:0005058;7.41e-21;2!UBERON:0009113;7.41e-21;2!UBERON:0002106;9.71e-15;3!UBERON:0002405;5.27e-13;27!UBERON:0000029;2.07e-11;1!UBERON:0002372;4.01e-11;1!UBERON:0001961;4.01e-11;1!UBERON:0001744;4.01e-11;1!UBERON:0001042;4.01e-11;1!UBERON:0001735;4.01e-11;1!UBERON:0002193;2.31e-08;42!UBERON:0002390;5.59e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.89e-23,7;UBERON:0005057,1.89e-23,7;UBERON:0002106,1.00e-14,3;UBERON:0004854,1.00e-14,3;UBERON:0009034,1.00e-14,3;UBERON:0002095,1.00e-14,3;UBERON:0004782,1.00e-14,3;UBERON:0003281,1.00e-14,3;UBERON:0009664,1.00e-14,3;UBERON:0002296,1.00e-14,3;UBERON:0005602,1.00e-14,3;UBERON:0001179,1.00e-14,3;UBERON:0006293,1.00e-14,3;UBERON:0000029,1.97e-11,1;UBERON:0002372,4.44e-11,1;UBERON:0001961,4.44e-11,1;UBERON:0001744,4.44e-11,1;UBERON:0001735,4.44e-11,1;UBERON:0002370,5.44e-11,4;UBERON:0005058,5.44e-11,4;UBERON:0009113,5.44e-11,4;UBERON:0003295,5.44e-11,4;UBERON:0005562,5.44e-11,4;UBERON:0001042,1.63e-09,10;UBERON:0009145,1.63e-09,10;UBERON:0006562,1.07e-08,11;UBERON:0003351,1.29e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36910889009705,7.11607403090844,0,0,6.8970292794538,5.2883589822789,1.90810750907073,8.53819453664173,1.76171156811282,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,0,0,0,0,0,0,0,0,0,0,1.73123055571734,9.95985806877798,52.6106700005114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45782623993146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,18.9847514319304,8.44398332453861,0,0,0,0,0,0,0,0,0,0,0.5290268405154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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7607 | |||
|TSSclassifier=S | |||
|UniProt=B9A063,C9JC21 | |||
|association_with_transcript=0bp_to_ENST00000409090,ENST00000437387,ENST00000496841,uc002toq.1,uc002tor.1_5end | |||
|coexpression_cluster_id=C796 | |||
|description=CAGE_peak_3_at_MYO7B_5end | |||
|id=chr2:128377550..128377603,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.64e-30!14;CL:0000945!2.38e-20!24;CL:0000826!2.38e-20!24;CL:0000838!1.00e-13!52;CL:0000542!2.09e-13!53;CL:0000051!2.09e-13!53;CL:0000842!6.76e-13!3;CL:0000224!8.49e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.87e-60;13!CL:0000945;2.74e-32;24!CL:0000542;1.51e-15;53!CL:0000817;4.01e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.62e-56,14;CL:0000945,2.41e-32,24;CL:0000826,2.41e-32,24;CL:0000838,1.12e-21,52;CL:0000542,3.06e-21,53;CL:0000051,3.06e-21,53;CL:0002087,8.11e-09,115;CL:0002031,2.20e-08,120;CL:0000738,3.29e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-15;53!UBERON:0004872;1.26e-13;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.27e-11!7;UBERON:0001557!1.10e-07!19;UBERON:0002106!3.03e-07!3;UBERON:0004854!3.03e-07!3;UBERON:0009034!3.03e-07!3;UBERON:0002095!3.03e-07!3;UBERON:0004782!3.03e-07!3;UBERON:0003281!3.03e-07!3;UBERON:0009664!3.03e-07!3;UBERON:0002296!3.03e-07!3;UBERON:0005602!3.03e-07!3;UBERON:0001179!3.03e-07!3;UBERON:0006293!3.03e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.41e-32;5!UBERON:0005057;1.41e-32;5!UBERON:0002370;7.41e-21;2!UBERON:0005058;7.41e-21;2!UBERON:0009113;7.41e-21;2!UBERON:0002106;9.71e-15;3!UBERON:0002405;5.27e-13;27!UBERON:0000029;2.07e-11;1!UBERON:0002372;4.01e-11;1!UBERON:0001961;4.01e-11;1!UBERON:0001744;4.01e-11;1!UBERON:0001042;4.01e-11;1!UBERON:0001735;4.01e-11;1!UBERON:0002193;2.31e-08;42!UBERON:0002390;5.59e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.89e-23,7;UBERON:0005057,1.89e-23,7;UBERON:0002106,1.00e-14,3;UBERON:0004854,1.00e-14,3;UBERON:0009034,1.00e-14,3;UBERON:0002095,1.00e-14,3;UBERON:0004782,1.00e-14,3;UBERON:0003281,1.00e-14,3;UBERON:0009664,1.00e-14,3;UBERON:0002296,1.00e-14,3;UBERON:0005602,1.00e-14,3;UBERON:0001179,1.00e-14,3;UBERON:0006293,1.00e-14,3;UBERON:0000029,1.97e-11,1;UBERON:0002372,4.44e-11,1;UBERON:0001961,4.44e-11,1;UBERON:0001744,4.44e-11,1;UBERON:0001735,4.44e-11,1;UBERON:0002370,5.44e-11,4;UBERON:0005058,5.44e-11,4;UBERON:0009113,5.44e-11,4;UBERON:0003295,5.44e-11,4;UBERON:0005562,5.44e-11,4;UBERON:0001042,1.63e-09,10;UBERON:0009145,1.63e-09,10;UBERON:0006562,1.07e-08,11;UBERON:0003351,1.29e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36910889009705,7.11607403090844,0,0,6.8970292794538,5.2883589822789,1.90810750907073,8.53819453664173,1.76171156811282,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,0,0,0,0,0,0,0,0,0,0,1.73123055571734,9.95985806877798,52.6106700005114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45782623993146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,18.9847514319304,8.44398332453861,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,6.84642444261665,1.92431614317159,0,0.0636471582781649,0,0,0,1.21233695426258,0.286888821570705,0,0,0.106727345877715,0,0,0,0,0,0,1.40891655513718,0 | |||
|short_description=p3@MYO7B | |||
}} |
Revision as of 13:24, 12 September 2013
Short description: | p3@MYO7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MYO7B_5end |
Coexpression cluster: | C796_acute_chronic_spleen_CD4_CD19_thymus_hairy |
Association with transcript: | 0bp_to_ENST00000409090, ENST00000437387, ENST00000496841, uc002toq.1, uc002tor.1_5end |
EntrezGene: | MYO7B |
HGNC: | 7607 |
UniProt: | B9A063C9JC21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.62e-56 | 14 |
lymphocyte of B lineage | 2.41e-32 | 24 |
pro-B cell | 2.41e-32 | 24 |
lymphoid lineage restricted progenitor cell | 1.12e-21 | 52 |
lymphocyte | 3.06e-21 | 53 |
common lymphoid progenitor | 3.06e-21 | 53 |
nongranular leukocyte | 8.11e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-08 | 120 |
leukocyte | 3.29e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.89e-23 | 7 |
immune organ | 1.89e-23 | 7 |
spleen | 1.00e-14 | 3 |
gastrointestinal system mesentery | 1.00e-14 | 3 |
stomach region | 1.00e-14 | 3 |
mesentery | 1.00e-14 | 3 |
gastrointestinal system serosa | 1.00e-14 | 3 |
mesentery of stomach | 1.00e-14 | 3 |
gut mesentery | 1.00e-14 | 3 |
dorsal mesentery | 1.00e-14 | 3 |
dorsal mesogastrium | 1.00e-14 | 3 |
peritoneal cavity | 1.00e-14 | 3 |
spleen primordium | 1.00e-14 | 3 |
lymph node | 1.97e-11 | 1 |
tonsil | 4.44e-11 | 1 |
mucosa-associated lymphoid tissue | 4.44e-11 | 1 |
lymphoid tissue | 4.44e-11 | 1 |
tonsillar ring | 4.44e-11 | 1 |
thymus | 5.44e-11 | 4 |
hemolymphoid system gland | 5.44e-11 | 4 |
thymic region | 5.44e-11 | 4 |
pharyngeal gland | 5.44e-11 | 4 |
thymus primordium | 5.44e-11 | 4 |
chordate pharynx | 1.63e-09 | 10 |
pharyngeal region of foregut | 1.63e-09 | 10 |
pharynx | 1.07e-08 | 11 |
pharyngeal epithelium | 1.29e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.