FFCP PHASE1:Hg19::chr2:210673443..210673452,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=11129|TSSclassifier=W|UniProt=|association_with_transcript=-75bp_to_ENST00000428587_5end|coexpression_cluster_id=C2135|description=CAGE_peak_1_at_SNAI1P1_5end|id=chr2:210673443..210673452,+|ontology_enrichment_celltype=CL:0000039!2.31e-17!7;CL:0000586!2.31e-17!7;CL:0000946!1.65e-08!1;CL:0000786!1.65e-08!1;CL:0000980!1.65e-08!1|ontology_enrichment_celltype_v019=CL:0000039;7.47e-20;7!CL:0000586;7.47e-20;7|ontology_enrichment_celltype_v019_2=CL:0000039,8.62e-20,7;CL:0000586,8.62e-20,7|ontology_enrichment_development_v019=UBERON:0009117;5.27e-53;10!UBERON:0005564;5.27e-53;10|ontology_enrichment_disease=DOID:3095!2.18e-08!22;DOID:2994!2.18e-08!22;DOID:2355!2.22e-08!1;DOID:0060058!5.12e-07!10|ontology_enrichment_disease_v019=DOID:3095;5.32e-07;22!DOID:2994;5.32e-07;22|ontology_enrichment_disease_v019_2=DOID:3095,5.57e-07,22;DOID:2994,5.57e-07,22|ontology_enrichment_uberon=UBERON:0003135!1.57e-24!11;UBERON:0000473!5.83e-24!8;UBERON:0003101!5.01e-12!22;UBERON:0000079!5.01e-12!22;UBERON:0000991!5.11e-09!21;UBERON:0009196!5.11e-09!21;UBERON:0009117!5.11e-09!21;UBERON:0005564!5.11e-09!21;UBERON:0001301!1.13e-08!1;UBERON:0004176!1.35e-08!22|ontology_enrichment_uberon_v019=UBERON:0000473;5.12e-66;8!UBERON:0003135;2.86e-48;11!UBERON:0000991;1.12e-25;21!UBERON:0003101;1.51e-24;22!UBERON:0000079;1.51e-24;22!UBERON:0003133;8.98e-09;44!UBERON:0002323;1.15e-08;45!UBERON:0002553;7.42e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.05e-66,8;UBERON:0003135,3.24e-48,11;UBERON:0000991,1.19e-25,21;UBERON:0009196,1.19e-25,21;UBERON:0009117,1.19e-25,21;UBERON:0005564,1.19e-25,21;UBERON:0004176,1.61e-24,22;UBERON:0003101,1.61e-24,22;UBERON:0000079,1.61e-24,22;UBERON:0002323,4.51e-12,46;UBERON:0003133,1.36e-11,48;UBERON:0004458,2.28e-11,49;UBERON:0003886,2.28e-10,54;UBERON:0005156,1.55e-09,59;UBERON:0000990,1.55e-09,59;UBERON:0002553,3.07e-09,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,1.35357396370308,0,0.671286347903371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,1.01084389488329,3.50990555009325,1.66713136080127,4.55539021265503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@SNAI1P1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11129 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-75bp_to_ENST00000428587_5end | |||
|coexpression_cluster_id=C2135 | |||
|description=CAGE_peak_1_at_SNAI1P1_5end | |||
|id=chr2:210673443..210673452,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.31e-17!7;CL:0000586!2.31e-17!7;CL:0000946!1.65e-08!1;CL:0000786!1.65e-08!1;CL:0000980!1.65e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.47e-20;7!CL:0000586;7.47e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.62e-20,7;CL:0000586,8.62e-20,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.27e-53;10!UBERON:0005564;5.27e-53;10 | |||
|ontology_enrichment_disease=DOID:3095!2.18e-08!22;DOID:2994!2.18e-08!22;DOID:2355!2.22e-08!1;DOID:0060058!5.12e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.32e-07;22!DOID:2994;5.32e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.57e-07,22;DOID:2994,5.57e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.57e-24!11;UBERON:0000473!5.83e-24!8;UBERON:0003101!5.01e-12!22;UBERON:0000079!5.01e-12!22;UBERON:0000991!5.11e-09!21;UBERON:0009196!5.11e-09!21;UBERON:0009117!5.11e-09!21;UBERON:0005564!5.11e-09!21;UBERON:0001301!1.13e-08!1;UBERON:0004176!1.35e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.12e-66;8!UBERON:0003135;2.86e-48;11!UBERON:0000991;1.12e-25;21!UBERON:0003101;1.51e-24;22!UBERON:0000079;1.51e-24;22!UBERON:0003133;8.98e-09;44!UBERON:0002323;1.15e-08;45!UBERON:0002553;7.42e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.05e-66,8;UBERON:0003135,3.24e-48,11;UBERON:0000991,1.19e-25,21;UBERON:0009196,1.19e-25,21;UBERON:0009117,1.19e-25,21;UBERON:0005564,1.19e-25,21;UBERON:0004176,1.61e-24,22;UBERON:0003101,1.61e-24,22;UBERON:0000079,1.61e-24,22;UBERON:0002323,4.51e-12,46;UBERON:0003133,1.36e-11,48;UBERON:0004458,2.28e-11,49;UBERON:0003886,2.28e-10,54;UBERON:0005156,1.55e-09,59;UBERON:0000990,1.55e-09,59;UBERON:0002553,3.07e-09,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,1.35357396370308,0,0.671286347903371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,1.01084389488329,3.50990555009325,1.66713136080127,4.55539021265503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SNAI1P1 | |||
}} |
Revision as of 16:21, 12 September 2013
Short description: | p1@SNAI1P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNAI1P1_5end |
Coexpression cluster: | C2135_testis_testicular_small_cholangiocellular_fibrous_chronic_thyroid |
Association with transcript: | -75bp_to_ENST00000428587_5end |
EntrezGene: | NA |
HGNC: | 11129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.62e-20 | 7 |
germ cell | 8.62e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.05e-66 | 8 |
male reproductive organ | 3.24e-48 | 11 |
gonad | 1.19e-25 | 21 |
indifferent external genitalia | 1.19e-25 | 21 |
indifferent gonad | 1.19e-25 | 21 |
gonad primordium | 1.19e-25 | 21 |
external genitalia | 1.61e-24 | 22 |
male organism | 1.61e-24 | 22 |
male reproductive system | 1.61e-24 | 22 |
body cavity | 4.51e-12 | 46 |
reproductive organ | 1.36e-11 | 48 |
body cavity or lining | 2.28e-11 | 49 |
body cavity precursor | 2.28e-10 | 54 |
reproductive structure | 1.55e-09 | 59 |
reproductive system | 1.55e-09 | 59 |
anatomical cavity | 3.07e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.57e-07 | 22 |
germ cell cancer | 5.57e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.