FFCP PHASE1:Hg19::chr2:234580379..234580386,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54600|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12541|TSSclassifier=S|UniProt=O60656|association_with_transcript=-112bp_to_ENST00000354728_5end|coexpression_cluster_id=C5|description=CAGE_peak_5_at_UGT1A9_5end|id=chr2:234580379..234580386,+|ontology_enrichment_celltype=CL:0000181!2.77e-09!12;CL:0000417!2.77e-09!12;CL:0000668!2.77e-09!12;CL:0000414!2.77e-09!12;CL:0000412!2.77e-09!12;CL:0000182!2.77e-09!12|ontology_enrichment_celltype_v019=CL:0000182;5.08e-12;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.08e-12,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.00e-16!55;UBERON:0005173!3.00e-16!55;UBERON:0002417!1.15e-14!61;UBERON:0000916!1.15e-14!61;UBERON:0002107!1.84e-12!19;UBERON:0006925!1.84e-12!19;UBERON:0008836!1.84e-12!19;UBERON:0008835!7.41e-11!22;UBERON:0003894!7.41e-11!22;UBERON:0009854!2.05e-10!23;UBERON:0007499!1.24e-09!25;UBERON:0009497!1.24e-09!25;UBERON:0000015!1.24e-09!25;UBERON:0002423!1.24e-09!25;UBERON:0006235!1.24e-09!25;UBERON:0004161!1.24e-09!25;UBERON:0005057!2.75e-09!26;UBERON:0009856!2.75e-09!26;UBERON:0002113!7.33e-09!27;UBERON:0003918!7.33e-09!27;UBERON:0005095!7.33e-09!27;UBERON:0007687!7.33e-09!27;UBERON:0005177!2.14e-08!107;UBERON:0009569!5.97e-08!113;UBERON:0002365!6.85e-08!31;UBERON:0002330!6.85e-08!31;UBERON:0000489!1.42e-07!32;UBERON:0002368!4.68e-07!35|ontology_enrichment_uberon_v019=UBERON:0002107;2.21e-16;19!UBERON:0006925;2.21e-16;19!UBERON:0002423;1.20e-12;25!UBERON:0002365;1.15e-10;31!UBERON:0002330;1.15e-10;31!UBERON:0005172;3.60e-09;52!UBERON:0005173;3.60e-09;52!UBERON:0002368;3.17e-08;33!UBERON:0000949;3.65e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.39e-16,19;UBERON:0006925,2.39e-16,19;UBERON:0008836,2.39e-16,19;UBERON:0008835,3.13e-14,22;UBERON:0003894,3.13e-14,22;UBERON:0009854,1.20e-13,23;UBERON:0007499,1.28e-12,25;UBERON:0009497,1.28e-12,25;UBERON:0000015,1.28e-12,25;UBERON:0002423,1.28e-12,25;UBERON:0006235,1.28e-12,25;UBERON:0004161,1.28e-12,25;UBERON:0009856,3.64e-12,26;UBERON:0002365,2.52e-10,31;UBERON:0002330,2.52e-10,31;UBERON:0005172,2.58e-10,54;UBERON:0005173,2.58e-10,54;UBERON:0002417,2.45e-09,60;UBERON:0000916,2.45e-09,60;UBERON:0002368,3.15e-09,35;UBERON:0000949,2.49e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@UGT1A9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12541 | |||
|TSSclassifier=S | |||
|UniProt=O60656 | |||
|association_with_transcript=-112bp_to_ENST00000354728_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_UGT1A9_5end | |||
|id=chr2:234580379..234580386,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.77e-09!12;CL:0000417!2.77e-09!12;CL:0000668!2.77e-09!12;CL:0000414!2.77e-09!12;CL:0000412!2.77e-09!12;CL:0000182!2.77e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.08e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.08e-12,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.00e-16!55;UBERON:0005173!3.00e-16!55;UBERON:0002417!1.15e-14!61;UBERON:0000916!1.15e-14!61;UBERON:0002107!1.84e-12!19;UBERON:0006925!1.84e-12!19;UBERON:0008836!1.84e-12!19;UBERON:0008835!7.41e-11!22;UBERON:0003894!7.41e-11!22;UBERON:0009854!2.05e-10!23;UBERON:0007499!1.24e-09!25;UBERON:0009497!1.24e-09!25;UBERON:0000015!1.24e-09!25;UBERON:0002423!1.24e-09!25;UBERON:0006235!1.24e-09!25;UBERON:0004161!1.24e-09!25;UBERON:0005057!2.75e-09!26;UBERON:0009856!2.75e-09!26;UBERON:0002113!7.33e-09!27;UBERON:0003918!7.33e-09!27;UBERON:0005095!7.33e-09!27;UBERON:0007687!7.33e-09!27;UBERON:0005177!2.14e-08!107;UBERON:0009569!5.97e-08!113;UBERON:0002365!6.85e-08!31;UBERON:0002330!6.85e-08!31;UBERON:0000489!1.42e-07!32;UBERON:0002368!4.68e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.21e-16;19!UBERON:0006925;2.21e-16;19!UBERON:0002423;1.20e-12;25!UBERON:0002365;1.15e-10;31!UBERON:0002330;1.15e-10;31!UBERON:0005172;3.60e-09;52!UBERON:0005173;3.60e-09;52!UBERON:0002368;3.17e-08;33!UBERON:0000949;3.65e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.39e-16,19;UBERON:0006925,2.39e-16,19;UBERON:0008836,2.39e-16,19;UBERON:0008835,3.13e-14,22;UBERON:0003894,3.13e-14,22;UBERON:0009854,1.20e-13,23;UBERON:0007499,1.28e-12,25;UBERON:0009497,1.28e-12,25;UBERON:0000015,1.28e-12,25;UBERON:0002423,1.28e-12,25;UBERON:0006235,1.28e-12,25;UBERON:0004161,1.28e-12,25;UBERON:0009856,3.64e-12,26;UBERON:0002365,2.52e-10,31;UBERON:0002330,2.52e-10,31;UBERON:0005172,2.58e-10,54;UBERON:0005173,2.58e-10,54;UBERON:0002417,2.45e-09,60;UBERON:0000916,2.45e-09,60;UBERON:0002368,3.15e-09,35;UBERON:0000949,2.49e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@UGT1A9 | |||
}} |
Revision as of 17:29, 12 September 2013
Short description: | p5@UGT1A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_UGT1A9_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -112bp_to_ENST00000354728_5end |
EntrezGene: | UGT1A9 |
HGNC: | 12541 |
UniProt: | O60656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.08e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.39e-16 | 19 |
digestive gland | 2.39e-16 | 19 |
liver bud | 2.39e-16 | 19 |
hepatic diverticulum | 3.13e-14 | 22 |
liver primordium | 3.13e-14 | 22 |
digestive tract diverticulum | 1.20e-13 | 23 |
epithelial sac | 1.28e-12 | 25 |
epithelium of foregut-midgut junction | 1.28e-12 | 25 |
anatomical boundary | 1.28e-12 | 25 |
hepatobiliary system | 1.28e-12 | 25 |
foregut-midgut junction | 1.28e-12 | 25 |
septum transversum | 1.28e-12 | 25 |
sac | 3.64e-12 | 26 |
exocrine gland | 2.52e-10 | 31 |
exocrine system | 2.52e-10 | 31 |
abdomen element | 2.58e-10 | 54 |
abdominal segment element | 2.58e-10 | 54 |
abdominal segment of trunk | 2.45e-09 | 60 |
abdomen | 2.45e-09 | 60 |
endocrine gland | 3.15e-09 | 35 |
endocrine system | 2.49e-07 | 45 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.