FFCP PHASE1:Hg19::chr21:39695698..39695720,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr21:39695698..39695720,-|id=chr21:39695698..39695720,-|ontology_enrichment_celltype=CL:0000188!1.31e-12!9;CL:0000048!2.76e-11!430;CL:0000860!5.21e-11!45;CL:0000723!6.32e-11!436;CL:0000034!1.84e-10!444;CL:0002057!3.61e-09!42;CL:0002371!2.85e-08!591;CL:0000594!3.44e-08!3;CL:0002009!2.58e-07!65;CL:0000569!4.80e-07!4;CL:0000011!4.80e-07!4;CL:0000144!6.23e-07!625;CL:0000134!7.30e-07!358;CL:0000515!8.63e-07!4|ontology_enrichment_celltype_v019=CL:0002540;1.85e-17;6!CL:0002582;1.09e-15;3!CL:0002591;3.08e-12;1!CL:0000569;7.52e-12;4!CL:0000134;2.94e-11;55!CL:0000048;6.00e-11;58!CL:0000723;6.47e-11;61!CL:0002092;1.04e-10;10!CL:0000034;2.82e-09;69!CL:0002334;7.98e-09;12!CL:0002583;9.53e-07;2|ontology_enrichment_celltype_v019_2=CL:0002540,1.80e-17,6;CL:0002582,1.06e-15,3;CL:0002591,3.85e-12,1;CL:0000569,5.70e-12,4;CL:0000011,5.70e-12,4;CL:0002092,1.02e-10,10;CL:0002334,8.77e-09,12|ontology_enrichment_development_v019=CL:0000011;7.52e-12;4|ontology_enrichment_disease=DOID:2394!1.77e-12!14|ontology_enrichment_disease_v019=DOID:2394;3.12e-20;14!DOID:120;1.85e-10;27!DOID:193;9.93e-10;29|ontology_enrichment_disease_v019_2=DOID:2394,3.24e-20,14;DOID:120,1.89e-10,27;DOID:193,1.01e-09,29|ontology_enrichment_uberon=UBERON:0002118!1.02e-14!5;UBERON:0004532!1.02e-14!5;UBERON:0002204!4.52e-13!167;UBERON:0000992!2.40e-10!13;UBERON:0002371!3.76e-08!80;UBERON:0001474!2.83e-07!86;UBERON:0004765!3.64e-07!101;UBERON:0001434!3.64e-07!101;UBERON:0000486!5.41e-07!82|ontology_enrichment_uberon_v019=UBERON:0000992;2.84e-14;13!UBERON:0002119;2.84e-12;4!UBERON:0002118;3.80e-10;5!UBERON:0002371;5.17e-09;12!UBERON:0000991;6.49e-09;21!UBERON:0000078;9.53e-07;2!UBERON:0002012;9.53e-07;2!UBERON:0008886;9.53e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000992,2.89e-14,13;UBERON:0002119,2.92e-12,4;UBERON:0002118,3.80e-10,5;UBERON:0000991,6.56e-09,21;UBERON:0009196,6.56e-09,21;UBERON:0009117,6.56e-09,21;UBERON:0005564,6.56e-09,21;UBERON:0004176,1.64e-08,22|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.575384784644301,0,0.945928919554341,0,0,0,0,0,0,0.918251677112708,0.320929027076094,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,1.06537035187876,2.21743321237285,0,1.16210378459959,0,0,0,0,0,0,0,0.539107359730903,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.467426619694449,0.554805861502613,3.78806010550178,2.0125432140206,2.66943366478961,0.228840068396924,0,1.24349760466224,1.92211694986524,2.07085797312813,0,4.65788870628778,0,0,0,3.75644022493046,0,0.813741466409323,6.91024904969726,0.429642228169954,5.56840511854192,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr21:39695698..39695720,- | |||
|id=chr21:39695698..39695720,- | |||
|ontology_enrichment_celltype=CL:0000188!1.31e-12!9;CL:0000048!2.76e-11!430;CL:0000860!5.21e-11!45;CL:0000723!6.32e-11!436;CL:0000034!1.84e-10!444;CL:0002057!3.61e-09!42;CL:0002371!2.85e-08!591;CL:0000594!3.44e-08!3;CL:0002009!2.58e-07!65;CL:0000569!4.80e-07!4;CL:0000011!4.80e-07!4;CL:0000144!6.23e-07!625;CL:0000134!7.30e-07!358;CL:0000515!8.63e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002540;1.85e-17;6!CL:0002582;1.09e-15;3!CL:0002591;3.08e-12;1!CL:0000569;7.52e-12;4!CL:0000134;2.94e-11;55!CL:0000048;6.00e-11;58!CL:0000723;6.47e-11;61!CL:0002092;1.04e-10;10!CL:0000034;2.82e-09;69!CL:0002334;7.98e-09;12!CL:0002583;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.80e-17,6;CL:0002582,1.06e-15,3;CL:0002591,3.85e-12,1;CL:0000569,5.70e-12,4;CL:0000011,5.70e-12,4;CL:0002092,1.02e-10,10;CL:0002334,8.77e-09,12 | |||
|ontology_enrichment_development_v019=CL:0000011;7.52e-12;4 | |||
|ontology_enrichment_disease=DOID:2394!1.77e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.12e-20;14!DOID:120;1.85e-10;27!DOID:193;9.93e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.24e-20,14;DOID:120,1.89e-10,27;DOID:193,1.01e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.02e-14!5;UBERON:0004532!1.02e-14!5;UBERON:0002204!4.52e-13!167;UBERON:0000992!2.40e-10!13;UBERON:0002371!3.76e-08!80;UBERON:0001474!2.83e-07!86;UBERON:0004765!3.64e-07!101;UBERON:0001434!3.64e-07!101;UBERON:0000486!5.41e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.84e-14;13!UBERON:0002119;2.84e-12;4!UBERON:0002118;3.80e-10;5!UBERON:0002371;5.17e-09;12!UBERON:0000991;6.49e-09;21!UBERON:0000078;9.53e-07;2!UBERON:0002012;9.53e-07;2!UBERON:0008886;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,2.89e-14,13;UBERON:0002119,2.92e-12,4;UBERON:0002118,3.80e-10,5;UBERON:0000991,6.56e-09,21;UBERON:0009196,6.56e-09,21;UBERON:0009117,6.56e-09,21;UBERON:0005564,6.56e-09,21;UBERON:0004176,1.64e-08,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.575384784644301,0,0.945928919554341,0,0,0,0,0,0,0.918251677112708,0.320929027076094,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,1.06537035187876,2.21743321237285,0,1.16210378459959,0,0,0,0,0,0,0,0.539107359730903,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.467426619694449,0.554805861502613,3.78806010550178,2.0125432140206,2.66943366478961,0.228840068396924,0,1.24349760466224,1.92211694986524,2.07085797312813,0,4.65788870628778,0,0,0,3.75644022493046,0,0.813741466409323,6.91024904969726,0.429642228169954,5.56840511854192,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:39695698..39695720,- | |||
}} |
Revision as of 10:22, 12 September 2013
Short description: | p@chr21:39695698..39695720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:39695698..39695720, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.80e-17 | 6 |
visceral preadipocyte | 1.06e-15 | 3 |
smooth muscle cell of the pulmonary artery | 3.85e-12 | 1 |
cardiac mesenchymal cell | 5.70e-12 | 4 |
migratory trunk neural crest cell | 5.70e-12 | 4 |
bone marrow cell | 1.02e-10 | 10 |
preadipocyte | 8.77e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
female gonad | 2.89e-14 | 13 |
left ovary | 2.92e-12 | 4 |
right ovary | 3.80e-10 | 5 |
gonad | 6.56e-09 | 21 |
indifferent external genitalia | 6.56e-09 | 21 |
indifferent gonad | 6.56e-09 | 21 |
gonad primordium | 6.56e-09 | 21 |
external genitalia | 1.64e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.24e-20 | 14 |
female reproductive organ cancer | 1.89e-10 | 27 |
reproductive organ cancer | 1.01e-09 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.