FFCP PHASE1:Hg19::chr21:46954537..46954557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6573|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10937|TSSclassifier=S|UniProt=B7Z8C3,P41440|association_with_transcript=0bp_to_NM_001205207_5end|description=CAGE_peak_13_at_SLC19A1_5end|id=chr21:46954537..46954557,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.31e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.22e-51!57;UBERON:0005068!4.22e-51!57;UBERON:0006241!4.22e-51!57;UBERON:0007135!4.22e-51!57;UBERON:0002616!3.81e-49!59;UBERON:0003075!1.26e-44!86;UBERON:0007284!1.26e-44!86;UBERON:0005743!4.49e-44!86;UBERON:0000955!2.65e-43!69;UBERON:0006238!2.65e-43!69;UBERON:0002346!2.73e-42!90;UBERON:0001017!1.46e-40!82;UBERON:0000073!3.41e-39!94;UBERON:0001016!3.41e-39!94;UBERON:0007023!1.85e-38!115;UBERON:0002780!2.89e-38!41;UBERON:0001890!2.89e-38!41;UBERON:0006240!2.89e-38!41;UBERON:0003080!3.04e-37!42;UBERON:0002020!4.95e-34!34;UBERON:0003528!4.95e-34!34;UBERON:0001893!6.03e-34!34;UBERON:0003056!4.48e-32!61;UBERON:0002791!2.30e-31!33;UBERON:0001869!6.73e-29!32;UBERON:0000033!1.48e-28!123;UBERON:0000153!7.36e-27!129;UBERON:0007811!7.36e-27!129;UBERON:0002619!1.12e-24!22;UBERON:0002298!7.84e-22!8;UBERON:0000956!1.73e-21!25;UBERON:0000203!1.73e-21!25;UBERON:0004121!9.88e-20!169;UBERON:0001950!3.33e-19!20;UBERON:0000924!4.34e-19!173;UBERON:0006601!4.34e-19!173;UBERON:0004733!1.76e-18!12;UBERON:0002028!1.76e-18!12;UBERON:0007277!1.76e-18!12;UBERON:0004732!5.86e-17!13;UBERON:0000025!2.91e-15!194;UBERON:0000200!6.54e-15!6;UBERON:0002308!1.34e-14!9;UBERON:0000125!1.34e-14!9;UBERON:0003076!1.60e-14!15;UBERON:0003057!1.60e-14!15;UBERON:0001896!3.24e-12!3;UBERON:0005290!3.24e-12!3;UBERON:0010096!3.24e-12!3;UBERON:0000119!1.04e-11!312;UBERON:0006331!1.63e-11!3;UBERON:0000988!1.75e-11!3;UBERON:0002771!3.03e-11!3;UBERON:0000483!4.26e-11!309;UBERON:0004111!1.01e-10!241;UBERON:0000477!3.88e-10!286;UBERON:0002680!7.69e-10!9;UBERON:0001895!7.69e-10!9;UBERON:0010092!7.69e-10!9;UBERON:0000064!9.35e-10!219;UBERON:0000369!1.93e-09!4;UBERON:0002435!1.93e-09!4;UBERON:0000204!1.93e-09!4;UBERON:0010082!1.93e-09!4;UBERON:0009663!6.28e-09!7;UBERON:0001954!7.12e-09!2;UBERON:0003022!7.12e-09!2;UBERON:0002421!7.12e-09!2;UBERON:0002600!7.12e-09!2;UBERON:0002148!2.33e-08!2;UBERON:0009662!2.33e-08!2;UBERON:0002360!5.07e-08!2;UBERON:0000094!5.07e-08!2;UBERON:0007645!5.07e-08!2;UBERON:0000349!1.22e-07!5;UBERON:0001871!1.64e-07!7;UBERON:0000475!2.27e-07!365;UBERON:0002021!3.69e-07!5;UBERON:0002420!6.01e-07!9;UBERON:0007245!6.01e-07!9;UBERON:0010009!6.01e-07!9;UBERON:0010011!6.01e-07!9;UBERON:0000454!6.01e-07!9|ontology_enrichment_uberon_v019=UBERON:0001905;5.69e-21;2!UBERON:0002757;5.69e-21;2!UBERON:0010134;5.69e-21;2!UBERON:0005408;5.69e-21;2!UBERON:0001899;5.69e-21;2!UBERON:0003296;3.42e-11;4!UBERON:0010133;3.42e-11;4!UBERON:0002784;3.42e-11;4!UBERON:0000966;2.63e-09;5!UBERON:0005388;2.63e-09;5!UBERON:0001802;2.63e-09;5!UBERON:0001894;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.66e-21,2;UBERON:0002757,4.66e-21,2;UBERON:0010134,4.66e-21,2;UBERON:0005408,4.66e-21,2;UBERON:0001899,4.66e-21,2;UBERON:0003296,3.10e-11,4;UBERON:0010133,3.10e-11,4;UBERON:0002784,3.10e-11,4;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81012448902989,0.324621940274555,0,1.59764275323235,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6573 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10937 | |||
|TSSclassifier=S | |||
|UniProt=B7Z8C3,P41440 | |||
|association_with_transcript=0bp_to_NM_001205207_5end | |||
|description=CAGE_peak_13_at_SLC19A1_5end | |||
|id=chr21:46954537..46954557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.31e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.22e-51!57;UBERON:0005068!4.22e-51!57;UBERON:0006241!4.22e-51!57;UBERON:0007135!4.22e-51!57;UBERON:0002616!3.81e-49!59;UBERON:0003075!1.26e-44!86;UBERON:0007284!1.26e-44!86;UBERON:0005743!4.49e-44!86;UBERON:0000955!2.65e-43!69;UBERON:0006238!2.65e-43!69;UBERON:0002346!2.73e-42!90;UBERON:0001017!1.46e-40!82;UBERON:0000073!3.41e-39!94;UBERON:0001016!3.41e-39!94;UBERON:0007023!1.85e-38!115;UBERON:0002780!2.89e-38!41;UBERON:0001890!2.89e-38!41;UBERON:0006240!2.89e-38!41;UBERON:0003080!3.04e-37!42;UBERON:0002020!4.95e-34!34;UBERON:0003528!4.95e-34!34;UBERON:0001893!6.03e-34!34;UBERON:0003056!4.48e-32!61;UBERON:0002791!2.30e-31!33;UBERON:0001869!6.73e-29!32;UBERON:0000033!1.48e-28!123;UBERON:0000153!7.36e-27!129;UBERON:0007811!7.36e-27!129;UBERON:0002619!1.12e-24!22;UBERON:0002298!7.84e-22!8;UBERON:0000956!1.73e-21!25;UBERON:0000203!1.73e-21!25;UBERON:0004121!9.88e-20!169;UBERON:0001950!3.33e-19!20;UBERON:0000924!4.34e-19!173;UBERON:0006601!4.34e-19!173;UBERON:0004733!1.76e-18!12;UBERON:0002028!1.76e-18!12;UBERON:0007277!1.76e-18!12;UBERON:0004732!5.86e-17!13;UBERON:0000025!2.91e-15!194;UBERON:0000200!6.54e-15!6;UBERON:0002308!1.34e-14!9;UBERON:0000125!1.34e-14!9;UBERON:0003076!1.60e-14!15;UBERON:0003057!1.60e-14!15;UBERON:0001896!3.24e-12!3;UBERON:0005290!3.24e-12!3;UBERON:0010096!3.24e-12!3;UBERON:0000119!1.04e-11!312;UBERON:0006331!1.63e-11!3;UBERON:0000988!1.75e-11!3;UBERON:0002771!3.03e-11!3;UBERON:0000483!4.26e-11!309;UBERON:0004111!1.01e-10!241;UBERON:0000477!3.88e-10!286;UBERON:0002680!7.69e-10!9;UBERON:0001895!7.69e-10!9;UBERON:0010092!7.69e-10!9;UBERON:0000064!9.35e-10!219;UBERON:0000369!1.93e-09!4;UBERON:0002435!1.93e-09!4;UBERON:0000204!1.93e-09!4;UBERON:0010082!1.93e-09!4;UBERON:0009663!6.28e-09!7;UBERON:0001954!7.12e-09!2;UBERON:0003022!7.12e-09!2;UBERON:0002421!7.12e-09!2;UBERON:0002600!7.12e-09!2;UBERON:0002148!2.33e-08!2;UBERON:0009662!2.33e-08!2;UBERON:0002360!5.07e-08!2;UBERON:0000094!5.07e-08!2;UBERON:0007645!5.07e-08!2;UBERON:0000349!1.22e-07!5;UBERON:0001871!1.64e-07!7;UBERON:0000475!2.27e-07!365;UBERON:0002021!3.69e-07!5;UBERON:0002420!6.01e-07!9;UBERON:0007245!6.01e-07!9;UBERON:0010009!6.01e-07!9;UBERON:0010011!6.01e-07!9;UBERON:0000454!6.01e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.69e-21;2!UBERON:0002757;5.69e-21;2!UBERON:0010134;5.69e-21;2!UBERON:0005408;5.69e-21;2!UBERON:0001899;5.69e-21;2!UBERON:0003296;3.42e-11;4!UBERON:0010133;3.42e-11;4!UBERON:0002784;3.42e-11;4!UBERON:0000966;2.63e-09;5!UBERON:0005388;2.63e-09;5!UBERON:0001802;2.63e-09;5!UBERON:0001894;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.66e-21,2;UBERON:0002757,4.66e-21,2;UBERON:0010134,4.66e-21,2;UBERON:0005408,4.66e-21,2;UBERON:0001899,4.66e-21,2;UBERON:0003296,3.10e-11,4;UBERON:0010133,3.10e-11,4;UBERON:0002784,3.10e-11,4;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7 | |||
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|short_description=p13@SLC19A1 | |||
}} |
Revision as of 10:45, 12 September 2013
Short description: | p13@SLC19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SLC19A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001205207_5end |
EntrezGene: | SLC19A1 |
HGNC: | 10937 |
UniProt: | B7Z8C3P41440 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.66e-21 | 2 |
regional part of epithalamus | 4.66e-21 | 2 |
secretory circumventricular organ | 4.66e-21 | 2 |
circumventricular organ | 4.66e-21 | 2 |
epithalamus | 4.66e-21 | 2 |
gland of diencephalon | 3.10e-11 | 4 |
neuroendocrine gland | 3.10e-11 | 4 |
regional part of diencephalon | 3.10e-11 | 4 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
diencephalon | 5.70e-07 | 7 |
future diencephalon | 5.70e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.