FFCP PHASE1:Hg19::chr3:195954929..195954943,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=200931|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-6bp_to_ENST00000475271_5end|coexpression_cluster_id=C1|description=CAGE_peak_4_at_OSTalpha_5end|id=chr3:195954929..195954943,+|ontology_enrichment_celltype=CL:0002195!1.07e-12!2;CL:0002571!1.07e-12!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009117;2.40e-36;10!UBERON:0005564;2.40e-36;10|ontology_enrichment_disease=DOID:178!4.06e-07!1;DOID:326!4.06e-07!1;DOID:3978!4.06e-07!1;DOID:3394!4.06e-07!1;DOID:5844!4.06e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003127!2.42e-12!2;UBERON:0002417!4.26e-11!61;UBERON:0000916!4.26e-11!61;UBERON:0005172!1.70e-10!55;UBERON:0005173!1.70e-10!55;UBERON:0001723!7.20e-09!3;UBERON:0001033!7.20e-09!3;UBERON:0010056!7.20e-09!3;UBERON:0002110!1.75e-08!3;UBERON:0006242!1.75e-08!3;UBERON:0007023!3.97e-08!115;UBERON:0009497!7.89e-08!25;UBERON:0000015!7.89e-08!25;UBERON:0002423!7.89e-08!25;UBERON:0006235!7.89e-08!25;UBERON:0004161!7.89e-08!25;UBERON:0001154!3.20e-07!1;UBERON:0001153!3.20e-07!1;UBERON:0002363!4.57e-07!1;UBERON:0007647!4.57e-07!1;UBERON:0010115!4.57e-07!1;UBERON:0001301!4.85e-07!1;UBERON:0009569!5.00e-07!113;UBERON:0002372!6.49e-07!1;UBERON:0001961!6.49e-07!1;UBERON:0001744!6.49e-07!1;UBERON:0001735!6.49e-07!1|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0000991;7.83e-18;21!UBERON:0003135;1.62e-15;11!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0002323;2.61e-07;45|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0000991,7.83e-18,21;UBERON:0009196,7.83e-18,21;UBERON:0009117,7.83e-18,21;UBERON:0005564,7.83e-18,21;UBERON:0004176,4.60e-17,22;UBERON:0003135,1.62e-15,11;UBERON:0002323,1.36e-08,46;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003133,2.89e-08,48;UBERON:0004458,4.12e-08,49;UBERON:0003886,1.99e-07,54;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,2.85799247727178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.68340236636796,5.35928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p4@OSTalpha}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=200931 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000475271_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_OSTalpha_5end | |||
|id=chr3:195954929..195954943,+ | |||
|ontology_enrichment_celltype=CL:0002195!1.07e-12!2;CL:0002571!1.07e-12!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.40e-36;10!UBERON:0005564;2.40e-36;10 | |||
|ontology_enrichment_disease=DOID:178!4.06e-07!1;DOID:326!4.06e-07!1;DOID:3978!4.06e-07!1;DOID:3394!4.06e-07!1;DOID:5844!4.06e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!2.42e-12!2;UBERON:0002417!4.26e-11!61;UBERON:0000916!4.26e-11!61;UBERON:0005172!1.70e-10!55;UBERON:0005173!1.70e-10!55;UBERON:0001723!7.20e-09!3;UBERON:0001033!7.20e-09!3;UBERON:0010056!7.20e-09!3;UBERON:0002110!1.75e-08!3;UBERON:0006242!1.75e-08!3;UBERON:0007023!3.97e-08!115;UBERON:0009497!7.89e-08!25;UBERON:0000015!7.89e-08!25;UBERON:0002423!7.89e-08!25;UBERON:0006235!7.89e-08!25;UBERON:0004161!7.89e-08!25;UBERON:0001154!3.20e-07!1;UBERON:0001153!3.20e-07!1;UBERON:0002363!4.57e-07!1;UBERON:0007647!4.57e-07!1;UBERON:0010115!4.57e-07!1;UBERON:0001301!4.85e-07!1;UBERON:0009569!5.00e-07!113;UBERON:0002372!6.49e-07!1;UBERON:0001961!6.49e-07!1;UBERON:0001744!6.49e-07!1;UBERON:0001735!6.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0000991;7.83e-18;21!UBERON:0003135;1.62e-15;11!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0002323;2.61e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0000991,7.83e-18,21;UBERON:0009196,7.83e-18,21;UBERON:0009117,7.83e-18,21;UBERON:0005564,7.83e-18,21;UBERON:0004176,4.60e-17,22;UBERON:0003135,1.62e-15,11;UBERON:0002323,1.36e-08,46;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003133,2.89e-08,48;UBERON:0004458,4.12e-08,49;UBERON:0003886,1.99e-07,54;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,2.85799247727178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.68340236636796,5.35928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@OSTalpha | |||
}} |
Revision as of 23:32, 12 September 2013
Short description: | p4@OSTalpha |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_OSTalpha_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -6bp_to_ENST00000475271_5end |
EntrezGene: | OSTalpha |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
gonad | 7.83e-18 | 21 |
indifferent external genitalia | 7.83e-18 | 21 |
indifferent gonad | 7.83e-18 | 21 |
gonad primordium | 7.83e-18 | 21 |
external genitalia | 4.60e-17 | 22 |
male reproductive organ | 1.62e-15 | 11 |
body cavity | 1.36e-08 | 46 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
reproductive organ | 2.89e-08 | 48 |
body cavity or lining | 4.12e-08 | 49 |
body cavity precursor | 1.99e-07 | 54 |
reproductive structure | 7.38e-07 | 59 |
reproductive system | 7.38e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.