FFCP PHASE1:Hg19::chr4:48082192..48082207,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7294|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12434|TSSclassifier=S|UniProt=D6RA14,D6RBM7|association_with_transcript=0bp_to_ENST00000507351,ENST00000509681,uc011bzj.1_5end|coexpression_cluster_id=C34|description=CAGE_peak_3_at_TXK_5end|id=chr4:48082192..48082207,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002594;1.38e-33;4!CL:0000359;5.08e-09;32!CL:0002595;7.01e-08;5|ontology_enrichment_celltype_v019_2=CL:0002594,1.63e-33,4;CL:0000359,5.51e-10,32;CL:0002595,6.55e-08,5;CL:0000192,1.31e-07,43;CL:0000514,1.31e-07,43|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002046!1.05e-09!5;UBERON:0004117!1.05e-09!5;UBERON:0007689!1.05e-09!5;UBERON:0007123!1.05e-09!5;UBERON:0003091!1.05e-09!5;UBERON:0009722!1.66e-07!11;UBERON:0007690!1.66e-07!11|ontology_enrichment_uberon_v019=UBERON:0001310;1.38e-33;4!UBERON:0010260;1.41e-15;9!UBERON:0001987;1.12e-09;4!UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.63e-33,4;UBERON:0010260,1.52e-15,9;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0003834,6.55e-08,5;UBERON:0001533,6.55e-08,5;UBERON:0001637,8.93e-08,42;UBERON:0003509,8.93e-08,42;UBERON:0004572,8.93e-08,42;UBERON:0004872,6.74e-07,83|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.37673205994273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,1.99031692572366,0,0,0,1.21746226177622,0,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,7.62564786291911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5304020213103,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0|short_description=p3@TXK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12434 | |||
|TSSclassifier=S | |||
|UniProt=D6RA14,D6RBM7 | |||
|association_with_transcript=0bp_to_ENST00000507351,ENST00000509681,uc011bzj.1_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_3_at_TXK_5end | |||
|id=chr4:48082192..48082207,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.38e-33;4!CL:0000359;5.08e-09;32!CL:0002595;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,1.63e-33,4;CL:0000359,5.51e-10,32;CL:0002595,6.55e-08,5;CL:0000192,1.31e-07,43;CL:0000514,1.31e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!1.05e-09!5;UBERON:0004117!1.05e-09!5;UBERON:0007689!1.05e-09!5;UBERON:0007123!1.05e-09!5;UBERON:0003091!1.05e-09!5;UBERON:0009722!1.66e-07!11;UBERON:0007690!1.66e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.38e-33;4!UBERON:0010260;1.41e-15;9!UBERON:0001987;1.12e-09;4!UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.63e-33,4;UBERON:0010260,1.52e-15,9;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0003834,6.55e-08,5;UBERON:0001533,6.55e-08,5;UBERON:0001637,8.93e-08,42;UBERON:0003509,8.93e-08,42;UBERON:0004572,8.93e-08,42;UBERON:0004872,6.74e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.37673205994273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,1.99031692572366,0,0,0,1.21746226177622,0,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,7.62564786291911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5304020213103,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p3@TXK | |||
}} |
Revision as of 11:02, 13 September 2013
Short description: | p3@TXK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TXK_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000507351, ENST00000509681, uc011bzj.1_5end |
EntrezGene: | TXK |
HGNC: | 12434 |
UniProt: | D6RA14D6RBM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 1.63e-33 | 4 |
vascular associated smooth muscle cell | 5.51e-10 | 32 |
smooth muscle cell of the subclavian artery | 6.55e-08 | 5 |
smooth muscle cell | 1.31e-07 | 43 |
smooth muscle myoblast | 1.31e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 1.63e-33 | 4 |
umbilical blood vessel | 1.52e-15 | 9 |
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |
thoracic segment blood vessel | 6.55e-08 | 5 |
subclavian artery | 6.55e-08 | 5 |
artery | 8.93e-08 | 42 |
arterial blood vessel | 8.93e-08 | 42 |
arterial system | 8.93e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 6.74e-07 | 83 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.