FFCP PHASE1:Hg19::chr4:120548851..120548873,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8654|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8784|TSSclassifier=S|UniProt=|association_with_transcript=-63bp_to_ENST00000264805_5end|coexpression_cluster_id=C1271|description=CAGE_peak_7_at_PDE5A_5end|id=chr4:120548851..120548873,-|ontology_enrichment_celltype=CL:0000057!9.41e-11!75;CL:0000055!2.24e-09!180;CL:0000192!2.10e-07!42;CL:0000514!2.10e-07!42|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.43e-20!115;UBERON:0000475!3.92e-10!365;UBERON:0000481!2.13e-09!347;UBERON:0000468!1.83e-08!659;UBERON:0002385!3.39e-07!63;UBERON:0001015!3.39e-07!63;UBERON:0000383!3.39e-07!63|ontology_enrichment_uberon_v019=UBERON:0003101;1.58e-10;22!UBERON:0000079;1.58e-10;22!UBERON:0000160;4.86e-09;17!UBERON:0005409;1.18e-07;22!UBERON:0011135;1.41e-07;5!UBERON:0002216;1.41e-07;5!UBERON:0011134;1.41e-07;5!UBERON:0002209;1.41e-07;5!UBERON:0002213;1.41e-07;5!UBERON:0007844;1.41e-07;5!UBERON:0011138;1.41e-07;5!UBERON:0001130;1.41e-07;5!UBERON:0001066;1.41e-07;5!UBERON:0001468;1.41e-07;5!UBERON:0005904;7.08e-07;4!UBERON:0000059;9.04e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.37e-11,114;UBERON:0003101,1.61e-10,22;UBERON:0000079,1.61e-10,22;UBERON:0000160,5.02e-09,17;UBERON:0004122,6.97e-08,15;UBERON:0001007,1.07e-07,145;UBERON:0001555,1.07e-07,145;UBERON:0007026,1.07e-07,145;UBERON:0011135,1.18e-07,5;UBERON:0002216,1.18e-07,5;UBERON:0011134,1.18e-07,5;UBERON:0002209,1.18e-07,5;UBERON:0002213,1.18e-07,5;UBERON:0005856,1.18e-07,5;UBERON:0005866,1.18e-07,5;UBERON:0005863,1.18e-07,5;UBERON:0007844,1.18e-07,5;UBERON:0011138,1.18e-07,5;UBERON:0001130,1.18e-07,5;UBERON:0001066,1.18e-07,5;UBERON:0001468,1.18e-07,5;UBERON:0004797,1.26e-07,7;UBERON:0005409,1.85e-07,25;UBERON:0001046,2.36e-07,19;UBERON:0005904,6.16e-07,4;UBERON:0000059,7.63e-07,11;UBERON:0000162,8.55e-07,14;UBERON:0001353,8.55e-07,14;UBERON:0000163,8.55e-07,14;UBERON:0006866,8.55e-07,14;UBERON:0000164,8.55e-07,14;UBERON:0000931,8.55e-07,14|phase1_expression=0.363356758541113,0,0.704772020479856,1.0007329835313,0,1.74467704820074,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0,0,1.60896258848061,2.31978163009541,0.672325146451775,0,0.730310090387373,0,0,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,1.00267582127178,0.869079113764942,0,0,0,0.886917589850256,0.087834785693126,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.51956613997496,2.51577443545116,2.86836620748814,1.41867352879343,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.516628905878827,4.75201142912821,9.89067717114228,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,0,13.1693286264251,12.5659996277598,4.6573798261045,0,1.97328599257748,0.85422955527427,1.48352330811693,0.600182192168805,1.03052529238439,2.83404594050192,3.35010341396862,0.168776332241266,0.584622030967192,1.51460264546469,0.828449087780694,10.6686397500416,2.13005755509969,1.10827308050404,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,1.3725424823882,0,0,0,0,0,1.03993478527958,1.44331342025273,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0.646358578788889,0,0,3.19125739901845,2.08014873822732,0,0,0,3.57444984145369,0,0,0,3.55391948742546,0,0.602878754119172,0,0,0,0,0,0.958499421966331,2.29723871668228,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,3.31267027641678,3.00102312635806,1.62759014219841,0.207970861530807,0.713715955188647,0.473107245101804,0.819989904948992,0,0,0,0,0.368738337083406,0.434418072340414,0,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0.920771839728375,1.40330047216537,2.56278298511402,0.511707249066704,0.965123526861645,0,0.154209693802656,0.532685175939381,0.246381468041427,0,0.232420756919918,0,0,0,9.75922809399157,15.1135669445575,29.2407445359516,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,1.55668090191184,0.660075999364704,0,0,3.21367859688319,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,2.32422774648643,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0.18532421910392,1.5743737541619,0,0.949138274156178,0.190630193923825,0.25589779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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-63bp_to_ENST00000264805_5end | |||
|coexpression_cluster_id=C1271 | |||
|description=CAGE_peak_7_at_PDE5A_5end | |||
|id=chr4:120548851..120548873,- | |||
|ontology_enrichment_celltype=CL:0000057!9.41e-11!75;CL:0000055!2.24e-09!180;CL:0000192!2.10e-07!42;CL:0000514!2.10e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-20!115;UBERON:0000475!3.92e-10!365;UBERON:0000481!2.13e-09!347;UBERON:0000468!1.83e-08!659;UBERON:0002385!3.39e-07!63;UBERON:0001015!3.39e-07!63;UBERON:0000383!3.39e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;1.58e-10;22!UBERON:0000079;1.58e-10;22!UBERON:0000160;4.86e-09;17!UBERON:0005409;1.18e-07;22!UBERON:0011135;1.41e-07;5!UBERON:0002216;1.41e-07;5!UBERON:0011134;1.41e-07;5!UBERON:0002209;1.41e-07;5!UBERON:0002213;1.41e-07;5!UBERON:0007844;1.41e-07;5!UBERON:0011138;1.41e-07;5!UBERON:0001130;1.41e-07;5!UBERON:0001066;1.41e-07;5!UBERON:0001468;1.41e-07;5!UBERON:0005904;7.08e-07;4!UBERON:0000059;9.04e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.37e-11,114;UBERON:0003101,1.61e-10,22;UBERON:0000079,1.61e-10,22;UBERON:0000160,5.02e-09,17;UBERON:0004122,6.97e-08,15;UBERON:0001007,1.07e-07,145;UBERON:0001555,1.07e-07,145;UBERON:0007026,1.07e-07,145;UBERON:0011135,1.18e-07,5;UBERON:0002216,1.18e-07,5;UBERON:0011134,1.18e-07,5;UBERON:0002209,1.18e-07,5;UBERON:0002213,1.18e-07,5;UBERON:0005856,1.18e-07,5;UBERON:0005866,1.18e-07,5;UBERON:0005863,1.18e-07,5;UBERON:0007844,1.18e-07,5;UBERON:0011138,1.18e-07,5;UBERON:0001130,1.18e-07,5;UBERON:0001066,1.18e-07,5;UBERON:0001468,1.18e-07,5;UBERON:0004797,1.26e-07,7;UBERON:0005409,1.85e-07,25;UBERON:0001046,2.36e-07,19;UBERON:0005904,6.16e-07,4;UBERON:0000059,7.63e-07,11;UBERON:0000162,8.55e-07,14;UBERON:0001353,8.55e-07,14;UBERON:0000163,8.55e-07,14;UBERON:0006866,8.55e-07,14;UBERON:0000164,8.55e-07,14;UBERON:0000931,8.55e-07,14 | |||
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| |||
|short_description=p7@PDE5A | |||
}} |
Revision as of 02:15, 13 September 2013
Short description: | p7@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PDE5A_5end |
Coexpression cluster: | C1271_Prostate_sacrococcigeal_glioblastoma_penis_Fibroblast_Smooth_aorta |
Association with transcript: | -63bp_to_ENST00000264805_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.37e-11 | 114 |
male organism | 1.61e-10 | 22 |
male reproductive system | 1.61e-10 | 22 |
intestine | 5.02e-09 | 17 |
genitourinary system | 6.97e-08 | 15 |
digestive system | 1.07e-07 | 145 |
digestive tract | 1.07e-07 | 145 |
primitive gut | 1.07e-07 | 145 |
intervertebral cartilage | 1.18e-07 | 5 |
symphysis | 1.18e-07 | 5 |
nonsynovial joint | 1.18e-07 | 5 |
fibrous joint | 1.18e-07 | 5 |
cartilaginous joint | 1.18e-07 | 5 |
developing mesenchymal condensation | 1.18e-07 | 5 |
pre-cartilage condensation | 1.18e-07 | 5 |
cartilaginous condensation | 1.18e-07 | 5 |
cartilage element | 1.18e-07 | 5 |
post-cranial axial skeletal system | 1.18e-07 | 5 |
vertebral column | 1.18e-07 | 5 |
intervertebral disk | 1.18e-07 | 5 |
intervertebral joint | 1.18e-07 | 5 |
blood vessel layer | 1.26e-07 | 7 |
gastrointestinal system | 1.85e-07 | 25 |
hindgut | 2.36e-07 | 19 |
duct of male reproductive system | 6.16e-07 | 4 |
large intestine | 7.63e-07 | 11 |
cloaca | 8.55e-07 | 14 |
anal region | 8.55e-07 | 14 |
embryonic cloaca | 8.55e-07 | 14 |
terminal part of digestive tract | 8.55e-07 | 14 |
primitive urogenital sinus | 8.55e-07 | 14 |
proctodeum | 8.55e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.