FFCP PHASE1:Hg19::chr4:169552580..169552593,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23022|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17068|TSSclassifier=S|UniProt=D6RBH5|association_with_transcript=-172bp_to_ENST00000504519_5end|coexpression_cluster_id=C947|description=CAGE_peak_11_at_PALLD_5end|id=chr4:169552580..169552593,+|ontology_enrichment_celltype=CL:0000055!3.58e-14!180;CL:0000035!2.07e-07!20;CL:0000128!7.32e-07!7;CL:0000126!7.32e-07!7;CL:0000127!7.32e-07!7;CL:0002453!7.32e-07!7|ontology_enrichment_celltype_v019=CL:0000128;1.20e-12;7!CL:0000126;1.20e-12;7!CL:0000127;1.20e-12;7!CL:0000062;1.41e-09;9|ontology_enrichment_celltype_v019_2=CL:0000128,1.16e-12,7;CL:0000126,1.16e-12,7;CL:0000127,1.16e-12,7;CL:0002453,1.16e-12,7;CL:0000062,6.32e-10,11;CL:0000375,6.32e-10,11;CL:0000335,6.32e-10,11;CL:0000221,4.42e-07,72;CL:0000064,9.30e-07,3;CL:0000067,9.30e-07,3;CL:0005012,9.30e-07,3;CL:0002304,9.30e-07,3|ontology_enrichment_development_v019=CL:0000335;8.82e-10;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.77e-10!659;UBERON:0000475!1.88e-08!365;UBERON:0000914!7.88e-08!83;UBERON:0002329!7.88e-08!83;UBERON:0003077!7.88e-08!83;UBERON:0003059!7.88e-08!83;UBERON:0007282!7.88e-08!83;UBERON:0009618!7.88e-08!83;UBERON:0007285!7.88e-08!83;UBERON:0000486!2.21e-07!82|ontology_enrichment_uberon_v019=UBERON:0000075;5.78e-10;16!UBERON:0004765;2.24e-08;26!UBERON:0001434;4.72e-08;36!UBERON:0010371;1.28e-07;31!UBERON:0006876;1.55e-07;11!UBERON:0001708;4.07e-07;4!UBERON:0008895;4.07e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000075,3.92e-10,16;UBERON:0011137,7.26e-10,14;UBERON:0006876,1.17e-07,11;UBERON:0001708,1.97e-07,4;UBERON:0008895,1.97e-07,4;UBERON:0000033,9.06e-07,56;UBERON:0001778,9.30e-07,3;UBERON:0001775,9.30e-07,3|phase1_expression=3.27021082687002,1.92690471501885,0.422863212287913,2.00146596706261,0.893922188854576,0.872338524100369,2.53299878168311,0,0,0.982935746006035,0.697801167972428,0.873765488520689,3.16520373874144,0.618831764800233,1.65698687863958,0.672325146451775,0.602694528023977,0.730310090387373,0,4.30923703268758,5.71201935483908,4.07491137921514,2.28988789704845,2.6006140763848,4.01736446703369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,2.3858578411533,0,6.80650683581289,4.87804674417641,5.44575671297381,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,1.49091585508596,1.8994576749687,1.45650098894541,0.860509862246441,0.354668382198357,0.560677600142307,0,1.97334038733728,0,0,0,2.4217188423189,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0,3.56400857184616,3.21447008062124,0,0,0,0.125118519871964,0,1.31693286264251,4.29082914118628,1.05166641234618,0.226864366320042,1.07633781413317,0.85422955527427,0.423863802319124,0.600182192168805,0.103052529238439,1.54584324027377,0.18611685633159,0.675105328965065,0.389748020644795,1.00973509697646,1.10459878370759,0.484938170456436,2.13005755509969,0.10075209822764,1.01736355386293,1.54608682530637,3.81844568827169,1.14721838155602,0,0.530119073285941,0,0.310983165046111,0,0.72995471815166,3.12899064659632,1.92972281457866,0,0.928735856063958,0,0.828147600278907,0.337169380156203,0.723033089650446,0.220587945464788,1.08939722046203,0.474541238222193,1.07865046528132,0.588664395376038,0.769494313892781,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.857839051492628,2.52425656439839,0,0.100528972411631,0.462942225792648,0,0,0,0.927443239800615,2.11335649624479,0,0,0,0,0,0,0,0,1.87467667973554,6.55130299975552,3.68615252830205,0.53735113621709,0.871901815541886,0,0,0,0.829312462163088,1.15295962733569,0.50496973370552,0,0,0,0,0,0,0,7.73704481982989,1.74384027533312,4.32695886343605,0.387815147273333,0,0,1.06375246633948,4.16029747645464,0.514414748524284,0,0.799266537048298,0,0.542621605391443,1.64648067356154,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,2.63587341040741,4.59447743336456,0,6.22559618670591,2.05476322550383,8.59492623551499,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,1.96306386750624,2.00068208423871,1.35632511849868,0.831883446123229,1.60586089917446,1.41932173530541,2.10854546986884,4.51419149591578,4.5481500811197,0,1.99267679560631,2.21243002250044,0.173767228936166,2.54541504701563,0.686286847621712,0,0,0,0,0,0,1.48864684691266,9.05425642399569,5.05188169979532,0.128139149255701,1.53512174720011,1.28683136914886,0,1.07946785661859,0,0.657017248110473,0,0.813472649219715,0,3.60911646545913,0,0.229628896329213,0.364182336013434,0,0,0.231046011313244,0,0,0.949964660035881,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,0.509752546090077,0.831076008928724,0.895499018888713,0,0,0,0.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |||
|TSSclassifier=S | |||
|UniProt=D6RBH5 | |||
|association_with_transcript=-172bp_to_ENST00000504519_5end | |||
|coexpression_cluster_id=C947 | |||
|description=CAGE_peak_11_at_PALLD_5end | |||
|id=chr4:169552580..169552593,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.58e-14!180;CL:0000035!2.07e-07!20;CL:0000128!7.32e-07!7;CL:0000126!7.32e-07!7;CL:0000127!7.32e-07!7;CL:0002453!7.32e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.20e-12;7!CL:0000126;1.20e-12;7!CL:0000127;1.20e-12;7!CL:0000062;1.41e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.16e-12,7;CL:0000126,1.16e-12,7;CL:0000127,1.16e-12,7;CL:0002453,1.16e-12,7;CL:0000062,6.32e-10,11;CL:0000375,6.32e-10,11;CL:0000335,6.32e-10,11;CL:0000221,4.42e-07,72;CL:0000064,9.30e-07,3;CL:0000067,9.30e-07,3;CL:0005012,9.30e-07,3;CL:0002304,9.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000335;8.82e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.77e-10!659;UBERON:0000475!1.88e-08!365;UBERON:0000914!7.88e-08!83;UBERON:0002329!7.88e-08!83;UBERON:0003077!7.88e-08!83;UBERON:0003059!7.88e-08!83;UBERON:0007282!7.88e-08!83;UBERON:0009618!7.88e-08!83;UBERON:0007285!7.88e-08!83;UBERON:0000486!2.21e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;5.78e-10;16!UBERON:0004765;2.24e-08;26!UBERON:0001434;4.72e-08;36!UBERON:0010371;1.28e-07;31!UBERON:0006876;1.55e-07;11!UBERON:0001708;4.07e-07;4!UBERON:0008895;4.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000075,3.92e-10,16;UBERON:0011137,7.26e-10,14;UBERON:0006876,1.17e-07,11;UBERON:0001708,1.97e-07,4;UBERON:0008895,1.97e-07,4;UBERON:0000033,9.06e-07,56;UBERON:0001778,9.30e-07,3;UBERON:0001775,9.30e-07,3 | |||
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| |||
|short_description=p11@PALLD | |||
}} |
Revision as of 03:18, 13 September 2013
Short description: | p11@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PALLD_5end |
Coexpression cluster: | C947_bone_Myoblast_mesenchymal_uterus_Preadipocyte_Ciliary_Astrocyte |
Association with transcript: | -172bp_to_ENST00000504519_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | D6RBH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.16e-12 | 7 |
macroglial cell | 1.16e-12 | 7 |
astrocyte | 1.16e-12 | 7 |
oligodendrocyte precursor cell | 1.16e-12 | 7 |
osteoblast | 6.32e-10 | 11 |
osteoprogenitor cell | 6.32e-10 | 11 |
mesenchyme condensation cell | 6.32e-10 | 11 |
ectodermal cell | 4.42e-07 | 72 |
ciliated cell | 9.30e-07 | 3 |
ciliated epithelial cell | 9.30e-07 | 3 |
multi-ciliated epithelial cell | 9.30e-07 | 3 |
non-pigmented ciliary epithelial cell | 9.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of skeletal system | 3.92e-10 | 16 |
axial skeletal system | 7.26e-10 | 14 |
vasculature of organ | 1.17e-07 | 11 |
jaw skeleton | 1.97e-07 | 4 |
splanchnocranium | 1.97e-07 | 4 |
head | 9.06e-07 | 56 |
ciliary epithelium | 9.30e-07 | 3 |
ciliary body | 9.30e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.