FFCP PHASE1:Hg19::chr5:147582427..147582438,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=404203|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29486|TSSclassifier=S|UniProt=Q6UWN8|association_with_transcript=23bp_to_ENST00000325630,uc003lpa.2_5end|coexpression_cluster_id=C106|description=CAGE_peak_6_at_SPINK6_5end|id=chr5:147582427..147582438,+|ontology_enrichment_celltype=CL:0002159!3.84e-21!13;CL:0000575!2.22e-10!2;CL:0000317!3.36e-10!2;CL:1000448!3.36e-10!2;CL:0002308!3.36e-10!2;CL:0002140!3.36e-10!2;CL:0002077!1.85e-09!33;CL:0000362!3.00e-09!8;CL:0000622!1.09e-08!5;CL:0000221!1.50e-07!71;CL:0000154!2.60e-07!6;CL:0000066!6.34e-07!254;CL:0002166!7.60e-07!3;CL:0002573!9.92e-07!2|ontology_enrichment_celltype_v019=CL:0000575;7.62e-24;2!CL:0002159;5.92e-08;14!CL:0000317;4.83e-07;2!CL:1000448;4.83e-07;2!CL:0002308;4.83e-07;2!CL:0002140;4.83e-07;2!CL:1000415;4.83e-07;2|ontology_enrichment_celltype_v019_2=CL:0000575,8.57e-24,2;CL:0002159,6.29e-08,14;CL:0000066,3.16e-07,253;CL:1000415,4.98e-07,2;CL:0000317,5.28e-07,2;CL:1000448,5.28e-07,2;CL:0002308,5.28e-07,2;CL:0002140,5.28e-07,2|ontology_enrichment_development_v019=UBERON:0008947;3.80e-32;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,4.40e-12,106;DOID:0050687,1.44e-08,143|ontology_enrichment_uberon=UBERON:0001737!2.10e-42!9;UBERON:0001557!3.25e-28!19;UBERON:0001004!1.11e-12!72;UBERON:0000072!3.18e-12!46;UBERON:0000065!4.69e-12!53;UBERON:0008947!1.10e-10!38;UBERON:0003258!1.10e-10!38;UBERON:0002419!3.36e-10!2;UBERON:0007771!3.36e-10!2;UBERON:0003297!3.36e-10!2;UBERON:0001821!3.36e-10!2;UBERON:0003487!3.36e-10!2;UBERON:0001820!3.36e-10!2;UBERON:0005089!3.36e-10!2;UBERON:0005088!3.36e-10!2;UBERON:0001723!9.08e-07!3;UBERON:0001033!9.08e-07!3;UBERON:0010056!9.08e-07!3|ontology_enrichment_uberon_v019=UBERON:0001737;2.02e-105;9!UBERON:0001557;2.02e-105;9!UBERON:0000072;2.56e-23;37!UBERON:0000065;1.07e-19;44!UBERON:0005795;8.15e-13;1!UBERON:0000964;1.97e-12;4!UBERON:0010409;1.97e-12;4!UBERON:0001004;2.24e-10;65!UBERON:0002419;4.83e-07;2!UBERON:0007771;4.83e-07;2!UBERON:0003297;4.83e-07;2!UBERON:0001821;4.83e-07;2!UBERON:0003487;4.83e-07;2!UBERON:0001820;4.83e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.15e-105,9;UBERON:0001557,1.62e-49,19;UBERON:0008947,2.66e-24,38;UBERON:0003258,2.66e-24,38;UBERON:0000072,1.86e-19,47;UBERON:0000065,8.40e-17,54;UBERON:0000964,2.09e-12,4;UBERON:0010409,2.09e-12,4;UBERON:0004348,2.09e-12,4;UBERON:0005427,2.09e-12,4;UBERON:0001004,5.66e-12,74;UBERON:0001048,1.10e-10,160;UBERON:0001041,5.09e-10,87;UBERON:0004921,5.07e-07,118;UBERON:0002419,5.28e-07,2;UBERON:0007771,5.28e-07,2;UBERON:0003297,5.28e-07,2;UBERON:0001821,5.28e-07,2;UBERON:0003487,5.28e-07,2;UBERON:0001820,5.28e-07,2;UBERON:0005089,5.28e-07,2;UBERON:0005088,5.28e-07,2;UBERON:0001007,7.78e-07,145;UBERON:0001555,7.78e-07,145;UBERON:0007026,7.78e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,7.92655560266954,6.23763353288976,5.06123162755312,7.16910822760561,6.10062443458737,4.50814176311084,5.12358971008625,7.06397274451246,5.00171304030308,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.67308493134324,0.307801034015188,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,4.9495747269527,0.271808412147228,0.941425616810999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=404203 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29486 | |||
|TSSclassifier=S | |||
|UniProt=Q6UWN8 | |||
|association_with_transcript=23bp_to_ENST00000325630,uc003lpa.2_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_6_at_SPINK6_5end | |||
|id=chr5:147582427..147582438,+ | |||
|ontology_enrichment_celltype=CL:0002159!3.84e-21!13;CL:0000575!2.22e-10!2;CL:0000317!3.36e-10!2;CL:1000448!3.36e-10!2;CL:0002308!3.36e-10!2;CL:0002140!3.36e-10!2;CL:0002077!1.85e-09!33;CL:0000362!3.00e-09!8;CL:0000622!1.09e-08!5;CL:0000221!1.50e-07!71;CL:0000154!2.60e-07!6;CL:0000066!6.34e-07!254;CL:0002166!7.60e-07!3;CL:0002573!9.92e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000575;7.62e-24;2!CL:0002159;5.92e-08;14!CL:0000317;4.83e-07;2!CL:1000448;4.83e-07;2!CL:0002308;4.83e-07;2!CL:0002140;4.83e-07;2!CL:1000415;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,8.57e-24,2;CL:0002159,6.29e-08,14;CL:0000066,3.16e-07,253;CL:1000415,4.98e-07,2;CL:0000317,5.28e-07,2;CL:1000448,5.28e-07,2;CL:0002308,5.28e-07,2;CL:0002140,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.80e-32;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.40e-12,106;DOID:0050687,1.44e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.10e-42!9;UBERON:0001557!3.25e-28!19;UBERON:0001004!1.11e-12!72;UBERON:0000072!3.18e-12!46;UBERON:0000065!4.69e-12!53;UBERON:0008947!1.10e-10!38;UBERON:0003258!1.10e-10!38;UBERON:0002419!3.36e-10!2;UBERON:0007771!3.36e-10!2;UBERON:0003297!3.36e-10!2;UBERON:0001821!3.36e-10!2;UBERON:0003487!3.36e-10!2;UBERON:0001820!3.36e-10!2;UBERON:0005089!3.36e-10!2;UBERON:0005088!3.36e-10!2;UBERON:0001723!9.08e-07!3;UBERON:0001033!9.08e-07!3;UBERON:0010056!9.08e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.02e-105;9!UBERON:0001557;2.02e-105;9!UBERON:0000072;2.56e-23;37!UBERON:0000065;1.07e-19;44!UBERON:0005795;8.15e-13;1!UBERON:0000964;1.97e-12;4!UBERON:0010409;1.97e-12;4!UBERON:0001004;2.24e-10;65!UBERON:0002419;4.83e-07;2!UBERON:0007771;4.83e-07;2!UBERON:0003297;4.83e-07;2!UBERON:0001821;4.83e-07;2!UBERON:0003487;4.83e-07;2!UBERON:0001820;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.15e-105,9;UBERON:0001557,1.62e-49,19;UBERON:0008947,2.66e-24,38;UBERON:0003258,2.66e-24,38;UBERON:0000072,1.86e-19,47;UBERON:0000065,8.40e-17,54;UBERON:0000964,2.09e-12,4;UBERON:0010409,2.09e-12,4;UBERON:0004348,2.09e-12,4;UBERON:0005427,2.09e-12,4;UBERON:0001004,5.66e-12,74;UBERON:0001048,1.10e-10,160;UBERON:0001041,5.09e-10,87;UBERON:0004921,5.07e-07,118;UBERON:0002419,5.28e-07,2;UBERON:0007771,5.28e-07,2;UBERON:0003297,5.28e-07,2;UBERON:0001821,5.28e-07,2;UBERON:0003487,5.28e-07,2;UBERON:0001820,5.28e-07,2;UBERON:0005089,5.28e-07,2;UBERON:0005088,5.28e-07,2;UBERON:0001007,7.78e-07,145;UBERON:0001555,7.78e-07,145;UBERON:0007026,7.78e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,7.92655560266954,6.23763353288976,5.06123162755312,7.16910822760561,6.10062443458737,4.50814176311084,5.12358971008625,7.06397274451246,5.00171304030308,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.67308493134324,0.307801034015188,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,4.9495747269527,0.271808412147228,0.941425616810999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0.801711364730253,0,0.3414369541879,0,0,0.236664001461131,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p6@SPINK6 | |||
}} |
Revision as of 13:55, 13 September 2013
Short description: | p6@SPINK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SPINK6_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 23bp_to_ENST00000325630, uc003lpa.2_5end |
EntrezGene: | SPINK6 |
HGNC: | 29486 |
UniProt: | Q6UWN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 8.57e-24 | 2 |
general ecto-epithelial cell | 6.29e-08 | 14 |
epithelial cell | 3.16e-07 | 253 |
epithelial cell of gall bladder | 4.98e-07 | 2 |
sebum secreting cell | 5.28e-07 | 2 |
epithelial cell of sweat gland | 5.28e-07 | 2 |
epithelial cell of skin gland | 5.28e-07 | 2 |
acinar cell of sebaceous gland | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.15e-105 | 9 |
upper respiratory tract | 1.62e-49 | 19 |
respiratory primordium | 2.66e-24 | 38 |
endoderm of foregut | 2.66e-24 | 38 |
segment of respiratory tract | 1.86e-19 | 47 |
respiratory tract | 8.40e-17 | 54 |
cornea | 2.09e-12 | 4 |
eye surface | 2.09e-12 | 4 |
optic eminence | 2.09e-12 | 4 |
corneal primordium | 2.09e-12 | 4 |
respiratory system | 5.66e-12 | 74 |
primordium | 1.10e-10 | 160 |
foregut | 5.09e-10 | 87 |
subdivision of digestive tract | 5.07e-07 | 118 |
skin gland | 5.28e-07 | 2 |
epidermis gland | 5.28e-07 | 2 |
gland of integumental system | 5.28e-07 | 2 |
sebaceous gland | 5.28e-07 | 2 |
skin sebaceous gland | 5.28e-07 | 2 |
sweat gland | 5.28e-07 | 2 |
sweat gland placode | 5.28e-07 | 2 |
sebaceous gland placode | 5.28e-07 | 2 |
digestive system | 7.78e-07 | 145 |
digestive tract | 7.78e-07 | 145 |
primitive gut | 7.78e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.40e-12 | 106 |
cell type cancer | 1.44e-08 | 143 |
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