FFCP PHASE1:Hg19::chr6:10419884..10419898,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7020|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11742|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000473652_5end|coexpression_cluster_id=C84|description=CAGE_peak_11_at_TFAP2A_5end|id=chr6:10419884..10419898,-|ontology_enrichment_celltype=CL:0000066!1.15e-25!254;CL:0002076!8.37e-10!43;CL:0002159!4.64e-08!13;CL:0002327!5.75e-08!4;CL:0000223!1.42e-07!59;CL:0000240!1.52e-07!6;CL:0000311!1.52e-07!6;CL:0000079!1.52e-07!6;CL:0000237!1.52e-07!6;CL:0000036!1.52e-07!6;CL:0000357!1.52e-07!6;CL:0000114!1.52e-07!6;CL:0002541!5.21e-07!3;CL:0000076!7.46e-07!62|ontology_enrichment_celltype_v019=CL:0002541;1.56e-12;3!CL:0000349;2.36e-11;19!CL:0000240;1.89e-09;6!CL:0000311;1.89e-09;6!CL:0000079;1.89e-09;6!CL:0000237;1.89e-09;6!CL:0002327;7.70e-09;4!CL:0002159;8.21e-09;14!CL:0000575;9.67e-09;2!CL:0002537;2.62e-07;5!CL:0000622;3.78e-07;5!CL:0000312;8.74e-07;5|ontology_enrichment_celltype_v019_2=CL:0002541,1.69e-12,3;CL:0000349,2.40e-11,19;CL:0000066,8.57e-10,253;CL:0000240,1.90e-09,6;CL:0000311,1.90e-09,6;CL:0000079,1.90e-09,6;CL:0000237,1.90e-09,6;CL:0000036,1.90e-09,6;CL:0000357,1.90e-09,6;CL:0000114,1.90e-09,6;CL:0002159,6.29e-09,14;CL:0002327,6.93e-09,4;CL:0000575,8.18e-09,2;CL:0002537,2.63e-07,5;CL:0000622,4.68e-07,5;CL:0000312,6.55e-07,5;CL:0000076,8.92e-07,63|ontology_enrichment_development_v019=CL:0000357;1.89e-09;6!CL:0000114;1.89e-09;6|ontology_enrichment_disease=DOID:305!5.22e-19!106;DOID:0050687!2.71e-15!143;DOID:1749!2.49e-10!14;DOID:162!1.15e-07!235;DOID:14566!3.05e-07!239|ontology_enrichment_disease_v019=DOID:5093;7.70e-09;4!DOID:1612;7.70e-09;4!DOID:4362;5.76e-07;5|ontology_enrichment_disease_v019_2=DOID:305,5.50e-11,106;DOID:0050687,9.48e-10,143;DOID:5093,8.60e-09,4;DOID:1612,8.60e-09,4;DOID:4362,4.88e-07,5|ontology_enrichment_uberon=UBERON:0005631!2.69e-17!14;UBERON:0000158!2.69e-17!14;UBERON:0001737!1.25e-14!9;UBERON:0003124!5.54e-13!7;UBERON:0001004!2.64e-11!72;UBERON:0004175!2.88e-10!25;UBERON:0003100!3.43e-09!41;UBERON:0000478!1.01e-08!24;UBERON:0003133!1.26e-08!48;UBERON:0001557!1.35e-08!19;UBERON:0005156!1.49e-08!59;UBERON:0000990!1.49e-08!59;UBERON:0000065!3.30e-08!53;UBERON:0004119!4.72e-08!169;UBERON:0000925!4.72e-08!169;UBERON:0006595!4.72e-08!169;UBERON:0001911!5.75e-08!4;UBERON:0005333!5.75e-08!4;UBERON:0008425!5.75e-08!4;UBERON:0005311!5.75e-08!4;UBERON:0000995!8.85e-08!21;UBERON:0001987!1.20e-07!4;UBERON:0004340!1.20e-07!4;UBERON:0008947!1.45e-07!38;UBERON:0003258!1.45e-07!38;UBERON:0005795!2.60e-07!22;UBERON:0003975!2.60e-07!22;UBERON:0000072!3.00e-07!46;UBERON:0000002!3.35e-07!6;UBERON:0001560!3.35e-07!6;UBERON:0000476!5.21e-07!3;UBERON:0000920!5.21e-07!3|ontology_enrichment_uberon_v019=UBERON:0005631;2.44e-13;10!UBERON:0000158;2.44e-13;10!UBERON:0003124;1.56e-12;3!UBERON:0000920;1.56e-12;3!UBERON:0000478;4.20e-11;24!UBERON:0001737;1.87e-09;9!UBERON:0001557;1.87e-09;9!UBERON:0001911;7.70e-09;4!UBERON:0001987;9.05e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.92e-20,14;UBERON:0000158,2.92e-20,14;UBERON:0003124,5.01e-19,7;UBERON:0000920,1.69e-12,3;UBERON:0000478,4.27e-11,24;UBERON:0001737,1.77e-09,9;UBERON:0001911,6.93e-09,4;UBERON:0005333,6.93e-09,4;UBERON:0008425,6.93e-09,4;UBERON:0005311,6.93e-09,4;UBERON:0001987,8.84e-09,4;UBERON:0004340,8.84e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72082757233402,0,0,0.464775771478074,0,0,0,0,0,0,0,0,1.77460200059766,1.68584690078102,0.482022059766964,0.772057809126758,0.871517776369625,1.42362371466658,0.674156540800822,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0,0,0,0,1.86575485194663,1.1240175325762,0.804231779293047,1.01847289674383,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0.567100388969546,0.806026704325635,1.45316969256981,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.736647911487171,0,0,0,0.902399225814824,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,2.36994326789761,0,0,2.29706215198469,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,2.44773882019626,0,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473652_5end | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_11_at_TFAP2A_5end | |||
|id=chr6:10419884..10419898,- | |||
|ontology_enrichment_celltype=CL:0000066!1.15e-25!254;CL:0002076!8.37e-10!43;CL:0002159!4.64e-08!13;CL:0002327!5.75e-08!4;CL:0000223!1.42e-07!59;CL:0000240!1.52e-07!6;CL:0000311!1.52e-07!6;CL:0000079!1.52e-07!6;CL:0000237!1.52e-07!6;CL:0000036!1.52e-07!6;CL:0000357!1.52e-07!6;CL:0000114!1.52e-07!6;CL:0002541!5.21e-07!3;CL:0000076!7.46e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.56e-12;3!CL:0000349;2.36e-11;19!CL:0000240;1.89e-09;6!CL:0000311;1.89e-09;6!CL:0000079;1.89e-09;6!CL:0000237;1.89e-09;6!CL:0002327;7.70e-09;4!CL:0002159;8.21e-09;14!CL:0000575;9.67e-09;2!CL:0002537;2.62e-07;5!CL:0000622;3.78e-07;5!CL:0000312;8.74e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.69e-12,3;CL:0000349,2.40e-11,19;CL:0000066,8.57e-10,253;CL:0000240,1.90e-09,6;CL:0000311,1.90e-09,6;CL:0000079,1.90e-09,6;CL:0000237,1.90e-09,6;CL:0000036,1.90e-09,6;CL:0000357,1.90e-09,6;CL:0000114,1.90e-09,6;CL:0002159,6.29e-09,14;CL:0002327,6.93e-09,4;CL:0000575,8.18e-09,2;CL:0002537,2.63e-07,5;CL:0000622,4.68e-07,5;CL:0000312,6.55e-07,5;CL:0000076,8.92e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;1.89e-09;6!CL:0000114;1.89e-09;6 | |||
|ontology_enrichment_disease=DOID:305!5.22e-19!106;DOID:0050687!2.71e-15!143;DOID:1749!2.49e-10!14;DOID:162!1.15e-07!235;DOID:14566!3.05e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.70e-09;4!DOID:1612;7.70e-09;4!DOID:4362;5.76e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.50e-11,106;DOID:0050687,9.48e-10,143;DOID:5093,8.60e-09,4;DOID:1612,8.60e-09,4;DOID:4362,4.88e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.69e-17!14;UBERON:0000158!2.69e-17!14;UBERON:0001737!1.25e-14!9;UBERON:0003124!5.54e-13!7;UBERON:0001004!2.64e-11!72;UBERON:0004175!2.88e-10!25;UBERON:0003100!3.43e-09!41;UBERON:0000478!1.01e-08!24;UBERON:0003133!1.26e-08!48;UBERON:0001557!1.35e-08!19;UBERON:0005156!1.49e-08!59;UBERON:0000990!1.49e-08!59;UBERON:0000065!3.30e-08!53;UBERON:0004119!4.72e-08!169;UBERON:0000925!4.72e-08!169;UBERON:0006595!4.72e-08!169;UBERON:0001911!5.75e-08!4;UBERON:0005333!5.75e-08!4;UBERON:0008425!5.75e-08!4;UBERON:0005311!5.75e-08!4;UBERON:0000995!8.85e-08!21;UBERON:0001987!1.20e-07!4;UBERON:0004340!1.20e-07!4;UBERON:0008947!1.45e-07!38;UBERON:0003258!1.45e-07!38;UBERON:0005795!2.60e-07!22;UBERON:0003975!2.60e-07!22;UBERON:0000072!3.00e-07!46;UBERON:0000002!3.35e-07!6;UBERON:0001560!3.35e-07!6;UBERON:0000476!5.21e-07!3;UBERON:0000920!5.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.44e-13;10!UBERON:0000158;2.44e-13;10!UBERON:0003124;1.56e-12;3!UBERON:0000920;1.56e-12;3!UBERON:0000478;4.20e-11;24!UBERON:0001737;1.87e-09;9!UBERON:0001557;1.87e-09;9!UBERON:0001911;7.70e-09;4!UBERON:0001987;9.05e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.92e-20,14;UBERON:0000158,2.92e-20,14;UBERON:0003124,5.01e-19,7;UBERON:0000920,1.69e-12,3;UBERON:0000478,4.27e-11,24;UBERON:0001737,1.77e-09,9;UBERON:0001911,6.93e-09,4;UBERON:0005333,6.93e-09,4;UBERON:0008425,6.93e-09,4;UBERON:0005311,6.93e-09,4;UBERON:0001987,8.84e-09,4;UBERON:0004340,8.84e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72082757233402,0,0,0.464775771478074,0,0,0,0,0,0,0,0,1.77460200059766,1.68584690078102,0.482022059766964,0.772057809126758,0.871517776369625,1.42362371466658,0.674156540800822,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0,0,0,0,1.86575485194663,1.1240175325762,0.804231779293047,1.01847289674383,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0.567100388969546,0.806026704325635,1.45316969256981,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.736647911487171,0,0,0,0.902399225814824,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,2.36994326789761,0,0,2.29706215198469,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,2.44773882019626,0,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,1.48482340416319,3.07160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,1.04171104434093,39.2695399982919,1.44999915086959,0.341380344856499,0,2.12748913591143,0,0,0,0,0,0,0,0,0,2.1787692703798,1.95193241990045,0.153900517007594,0,23.5175182475821,14.2714654611538,65.5143652689709,17.8640649449875,2.1983422416447,19.7222867126895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,1.18375320854817,0,0,0,0.450970258243478,0.414752765588989,0,0,0,0,0.853828638089378,0,0,0.391969589657511,1.30588809870604,0.34945333648406,0,2.12863928835987,3.50828722013691,1.31384731285135,0,0,0,0,0,0,2.93327074102205,0,0,0,0,0,0,0,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,4.3929380109778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0.670869375198532,0.551639951094387,1.10154635083496,0,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,1.65085738669511,0.462102664601353,0,0,0,0,0,0,9.95245439029405,0,0,0,0,0,0,0,0,0,0.351742488719241,0.255524855279191,0,0,0,0,7.71710620414958,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,1.0243108625637,2.76503864725637,0.860454717640555,0,0,0.846774100381858,0.4582137370881,0,0,0,0,0,0,0,0,3.88568794447312,0.467878926924211,0.795803100645473,0,0.45178432815584,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0.883164973845552,0.109265571963696,0,0.509944148709909,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p11@TFAP2A | |||
}} |
Revision as of 17:09, 13 September 2013
Short description: | p11@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_TFAP2A_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_ENST00000473652_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.69e-12 | 3 |
extraembryonic cell | 2.40e-11 | 19 |
epithelial cell | 8.57e-10 | 253 |
stratified squamous epithelial cell | 1.90e-09 | 6 |
keratin accumulating cell | 1.90e-09 | 6 |
stratified epithelial cell | 1.90e-09 | 6 |
keratinizing barrier epithelial cell | 1.90e-09 | 6 |
epithelial fate stem cell | 1.90e-09 | 6 |
stratified epithelial stem cell | 1.90e-09 | 6 |
surface ectodermal cell | 1.90e-09 | 6 |
general ecto-epithelial cell | 6.29e-09 | 14 |
mammary gland epithelial cell | 6.93e-09 | 4 |
corneal epithelial cell | 8.18e-09 | 2 |
amnion mesenchymal stem cell | 2.63e-07 | 5 |
acinar cell | 4.68e-07 | 5 |
keratinocyte | 6.55e-07 | 5 |
squamous epithelial cell | 8.92e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.92e-20 | 14 |
membranous layer | 2.92e-20 | 14 |
chorion | 5.01e-19 | 7 |
egg chorion | 1.69e-12 | 3 |
extraembryonic structure | 4.27e-11 | 24 |
larynx | 1.77e-09 | 9 |
mammary gland | 6.93e-09 | 4 |
mammary bud | 6.93e-09 | 4 |
mammary ridge | 6.93e-09 | 4 |
mammary placode | 6.93e-09 | 4 |
placenta | 8.84e-09 | 4 |
allantois | 8.84e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.50e-11 | 106 |
cell type cancer | 9.48e-10 | 143 |
thoracic cancer | 8.60e-09 | 4 |
breast cancer | 8.60e-09 | 4 |
cervical cancer | 4.88e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.