FFCP PHASE1:Hg19::chr8:59572512..59572526,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8439|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8017|TSSclassifier=S|UniProt=Q92636|association_with_transcript=-108bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end|coexpression_cluster_id=C45|description=CAGE_peak_20_at_NSMAF_5end|id=chr8:59572512..59572526,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;6.12e-51;7!CL:0000586;6.12e-51;7!CL:0002564;1.35e-08;3|ontology_enrichment_celltype_v019_2=CL:0000039,6.12e-51,7;CL:0000586,6.12e-51,7;CL:0002564,1.51e-08,3|ontology_enrichment_development_v019=UBERON:0009117;7.31e-36;10!UBERON:0005564;7.31e-36;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;1.33e-16;22!DOID:2994;1.33e-16;22|ontology_enrichment_disease_v019_2=DOID:3095,1.33e-16,22;DOID:2994,1.33e-16,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;1.16e-44;8!UBERON:0003135;1.17e-32;11!UBERON:0000991;2.28e-17;21!UBERON:0003101;1.33e-16;22!UBERON:0000079;1.33e-16;22!UBERON:0000922;1.02e-09;49!UBERON:0002242;1.35e-08;3!UBERON:0002323;6.52e-08;45|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.16e-44,8;UBERON:0003135,1.17e-32,11;UBERON:0000991,2.28e-17,21;UBERON:0009196,2.28e-17,21;UBERON:0009117,2.28e-17,21;UBERON:0005564,2.28e-17,21;UBERON:0004176,1.33e-16,22;UBERON:0003101,1.33e-16,22;UBERON:0000079,1.33e-16,22;UBERON:0002242,1.51e-08,3;UBERON:0003068,1.51e-08,3;UBERON:0002328,1.51e-08,3;UBERON:0004880,1.51e-08,3;UBERON:0002323,3.83e-08,46;UBERON:0003133,8.12e-08,48;UBERON:0004458,1.16e-07,49;UBERON:0003886,5.55e-07,54|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.542270404062111,0.995184627411951,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0.324547393654683,0,0,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0,0,0,0.157702415033935,0,0.902838299183157,2.27407504055985,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0.371606350251437,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,0,0,0,0.912938716132769,0,0,0.169291777801603,0.321176150207399,0.605399121573143,0,0,0.307240764308458,1.11838053946208,0.500547425135725,0,0,0,0,0,0,0,0,0.606802608747567,0,0.284136146806413,0,0,0.307160702099232,0,0.281338832821026,0,0.16480387422676,0.422250816255987,0,0,0,0,0.492339221844278,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0.591095237907095,0,0,0.278847488557207,0,0.455768223388005,0.23056390438806,0,0,0.31900115973192,0,0,0,0.156980256395025,0.332423363800313,0,0,0.167821586975843,0,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0,0.370691816839509,0.313265848516366,0.134802265961354,0,0,0.364909578431332,0,0,0,0,0.30607276163049,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |||
|TSSclassifier=S | |||
|UniProt=Q92636 | |||
|association_with_transcript=-108bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_20_at_NSMAF_5end | |||
|id=chr8:59572512..59572526,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.12e-51;7!CL:0000586;6.12e-51;7!CL:0002564;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.12e-51,7;CL:0000586,6.12e-51,7;CL:0002564,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.31e-36;10!UBERON:0005564;7.31e-36;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.33e-16;22!DOID:2994;1.33e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.33e-16,22;DOID:2994,1.33e-16,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.16e-44;8!UBERON:0003135;1.17e-32;11!UBERON:0000991;2.28e-17;21!UBERON:0003101;1.33e-16;22!UBERON:0000079;1.33e-16;22!UBERON:0000922;1.02e-09;49!UBERON:0002242;1.35e-08;3!UBERON:0002323;6.52e-08;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.16e-44,8;UBERON:0003135,1.17e-32,11;UBERON:0000991,2.28e-17,21;UBERON:0009196,2.28e-17,21;UBERON:0009117,2.28e-17,21;UBERON:0005564,2.28e-17,21;UBERON:0004176,1.33e-16,22;UBERON:0003101,1.33e-16,22;UBERON:0000079,1.33e-16,22;UBERON:0002242,1.51e-08,3;UBERON:0003068,1.51e-08,3;UBERON:0002328,1.51e-08,3;UBERON:0004880,1.51e-08,3;UBERON:0002323,3.83e-08,46;UBERON:0003133,8.12e-08,48;UBERON:0004458,1.16e-07,49;UBERON:0003886,5.55e-07,54 | |||
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| |||
|short_description=p20@NSMAF | |||
}} |
Revision as of 05:40, 14 September 2013
Short description: | p20@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_NSMAF_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -108bp_to_NM_003580, uc003xtt.2, uc003xtu.2_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | Q92636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.12e-51 | 7 |
germ cell | 6.12e-51 | 7 |
nucleus pulposus cell of intervertebral disc | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.16e-44 | 8 |
male reproductive organ | 1.17e-32 | 11 |
gonad | 2.28e-17 | 21 |
indifferent external genitalia | 2.28e-17 | 21 |
indifferent gonad | 2.28e-17 | 21 |
gonad primordium | 2.28e-17 | 21 |
external genitalia | 1.33e-16 | 22 |
male organism | 1.33e-16 | 22 |
male reproductive system | 1.33e-16 | 22 |
nucleus pulposus | 1.51e-08 | 3 |
axial mesoderm | 1.51e-08 | 3 |
notochord | 1.51e-08 | 3 |
chordamesoderm | 1.51e-08 | 3 |
body cavity | 3.83e-08 | 46 |
reproductive organ | 8.12e-08 | 48 |
body cavity or lining | 1.16e-07 | 49 |
body cavity precursor | 5.55e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.33e-16 | 22 |
germ cell cancer | 1.33e-16 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.