FFCP PHASE1:Hg19::chr9:12701254..12701275,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12450|TSSclassifier=N|UniProt=|association_with_transcript=-369bp_to_ENST00000470909_5end|coexpression_cluster_id=C4798|description=CAGE_peak_12_at_TYRP1_5end|id=chr9:12701254..12701275,+|ontology_enrichment_celltype=CL:0000148!2.78e-33!10;CL:0000541!2.78e-33!10;CL:0000147!2.02e-23!14;CL:0002567!3.43e-17!3;CL:0000710!5.14e-16!20;CL:0002504!9.84e-16!3;CL:1000279!9.84e-16!3;CL:1000280!9.84e-16!3;CL:0002195!4.63e-12!2;CL:0002571!4.63e-12!2;CL:0000075!1.56e-11!27;CL:0002588!4.97e-11!2;CL:0002077!3.32e-09!33;CL:0000174!6.21e-08!3;CL:0000325!1.35e-07!39;CL:0000055!5.95e-07!180;CL:0002566!7.35e-07!1;CL:0000333!8.92e-07!41;CL:0002568!9.15e-07!1;CL:0000077!9.65e-07!19|ontology_enrichment_celltype_v019=CL:0000148;9.77e-57;10!CL:0000147;2.02e-40;14!CL:0002567;4.81e-36;3!CL:0000710;3.64e-28;20!CL:0002195;1.02e-24;2!CL:0002571;1.02e-24;2!CL:0000075;9.82e-21;27!CL:0002077;1.64e-14;34!CL:0002566;2.78e-13;1!CL:0002568;4.23e-13;1!CL:0002097;4.55e-07;2|ontology_enrichment_celltype_v019_2=CL:0000148,8.99e-57,10;CL:0000541,8.99e-57,10;CL:0000147,1.90e-40,14;CL:0002567,4.27e-36,3;CL:0000710,3.50e-28,20;CL:0002195,1.02e-24,2;CL:0002571,1.02e-24,2;CL:0000075,9.53e-21,27;CL:0002077,2.30e-16,34;CL:0002566,2.95e-13,1;CL:0002568,4.77e-13,1;CL:0000333,8.10e-13,41;CL:0000133,7.50e-09,59;CL:0000221,3.51e-07,72;CL:0002097,4.42e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!8.37e-12!2;DOID:3371!6.96e-07!1;DOID:4549!6.96e-07!1;DOID:5861!6.96e-07!1;DOID:6496!6.96e-07!1|ontology_enrichment_disease_v019=DOID:1909;3.76e-24;2!DOID:3371;2.78e-13;1!DOID:4549;2.78e-13;1!DOID:5861;2.78e-13;1!DOID:6496;2.78e-13;1|ontology_enrichment_disease_v019_2=DOID:1909,3.76e-24,2;DOID:3371,2.62e-13,1;DOID:4549,2.62e-13,1;DOID:5861,2.62e-13,1;DOID:6496,2.62e-13,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20682733195786,4.96584953225761,5.86087236050235,5.13217338068116,1.43958489784653,2.40274446275134,16.5779330925735,0,0,0,4.00742318849111,0,0,0,0,0,0,0,8.14974563851441,0,0,0,4.6200953336531,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14378116354295,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.286822704408103,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73664823494752,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33628058591625,3.99651466962954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,2.57329909649911,0.260994291965212,1.36023555307363,0.694567422971502,0,0,0,18.2005761150327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@TYRP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-369bp_to_ENST00000470909_5end | |||
|coexpression_cluster_id=C4798 | |||
|description=CAGE_peak_12_at_TYRP1_5end | |||
|id=chr9:12701254..12701275,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.78e-33!10;CL:0000541!2.78e-33!10;CL:0000147!2.02e-23!14;CL:0002567!3.43e-17!3;CL:0000710!5.14e-16!20;CL:0002504!9.84e-16!3;CL:1000279!9.84e-16!3;CL:1000280!9.84e-16!3;CL:0002195!4.63e-12!2;CL:0002571!4.63e-12!2;CL:0000075!1.56e-11!27;CL:0002588!4.97e-11!2;CL:0002077!3.32e-09!33;CL:0000174!6.21e-08!3;CL:0000325!1.35e-07!39;CL:0000055!5.95e-07!180;CL:0002566!7.35e-07!1;CL:0000333!8.92e-07!41;CL:0002568!9.15e-07!1;CL:0000077!9.65e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.77e-57;10!CL:0000147;2.02e-40;14!CL:0002567;4.81e-36;3!CL:0000710;3.64e-28;20!CL:0002195;1.02e-24;2!CL:0002571;1.02e-24;2!CL:0000075;9.82e-21;27!CL:0002077;1.64e-14;34!CL:0002566;2.78e-13;1!CL:0002568;4.23e-13;1!CL:0002097;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.99e-57,10;CL:0000541,8.99e-57,10;CL:0000147,1.90e-40,14;CL:0002567,4.27e-36,3;CL:0000710,3.50e-28,20;CL:0002195,1.02e-24,2;CL:0002571,1.02e-24,2;CL:0000075,9.53e-21,27;CL:0002077,2.30e-16,34;CL:0002566,2.95e-13,1;CL:0002568,4.77e-13,1;CL:0000333,8.10e-13,41;CL:0000133,7.50e-09,59;CL:0000221,3.51e-07,72;CL:0002097,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!8.37e-12!2;DOID:3371!6.96e-07!1;DOID:4549!6.96e-07!1;DOID:5861!6.96e-07!1;DOID:6496!6.96e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.76e-24;2!DOID:3371;2.78e-13;1!DOID:4549;2.78e-13;1!DOID:5861;2.78e-13;1!DOID:6496;2.78e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.76e-24,2;DOID:3371,2.62e-13,1;DOID:4549,2.62e-13,1;DOID:5861,2.62e-13,1;DOID:6496,2.62e-13,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p12@TYRP1 | |||
}} |
Revision as of 07:23, 14 September 2013
Short description: | p12@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_TYRP1_5end |
Coexpression cluster: | C4798_Melanocyte_mesothelioma_Mesenchymal_extraskeletal_melanoma_Smooth_retina |
Association with transcript: | -369bp_to_ENST00000470909_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.99e-57 | 10 |
melanoblast | 8.99e-57 | 10 |
pigment cell | 1.90e-40 | 14 |
light melanocyte | 4.27e-36 | 3 |
neurecto-epithelial cell | 3.50e-28 | 20 |
hepatic stem cell | 1.02e-24 | 2 |
hepatic mesenchymal stem cell | 1.02e-24 | 2 |
columnar/cuboidal epithelial cell | 9.53e-21 | 27 |
ecto-epithelial cell | 2.30e-16 | 34 |
dark melanocyte | 2.95e-13 | 1 |
mesenchymal stem cell of Wharton's jelly | 4.77e-13 | 1 |
migratory neural crest cell | 8.10e-13 | 41 |
neurectodermal cell | 7.50e-09 | 59 |
ectodermal cell | 3.51e-07 | 72 |
cortical cell of adrenal gland | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.76e-24 | 2 |
chondrosarcoma | 2.62e-13 | 1 |
extraosseous chondrosarcoma | 2.62e-13 | 1 |
myxoid chondrosarcoma | 2.62e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 2.62e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.