FFCP PHASE1:Hg19::chr11:1955193..1955200,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=7140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=90bp_to_ENST00000493234_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_23_at_TNNT3_5end | |||
|id=chr11:1955193..1955200,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.05e-34;2!UBERON:0010056;7.05e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!6.83e-37!2;UBERON:0001723!2.07e-25!3;UBERON:0001033!2.07e-25!3;UBERON:0010056!2.07e-25!3;UBERON:0002426!1.08e-19!1;UBERON:0003831!1.08e-19!1;UBERON:0003898!1.08e-19!1;UBERON:0004830!1.08e-19!1;UBERON:0001774!1.08e-19!1;UBERON:0003830!1.08e-19!1;UBERON:0005175!1.08e-19!1;UBERON:0003897!1.08e-19!1;UBERON:0001103!1.08e-19!1;UBERON:0010084!1.08e-19!1;UBERON:0002079!1.56e-19!1;UBERON:0001630!1.57e-10!2;UBERON:0005090!1.57e-10!2;UBERON:0002081!1.89e-10!2;UBERON:0003127!2.72e-10!2;UBERON:0001042!2.62e-08!10;UBERON:0009145!2.62e-08!10;UBERON:0000974!3.50e-08!10;UBERON:0006562!1.24e-07!11;UBERON:0004151!2.19e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;9.74e-88;3!UBERON:0001033;9.74e-88;3!UBERON:0002426;2.39e-66;1!UBERON:0003831;2.39e-66;1!UBERON:0003898;2.39e-66;1!UBERON:0004830;2.39e-66;1!UBERON:0003830;2.39e-66;1!UBERON:0005175;2.39e-66;1!UBERON:0001774;2.39e-66;1!UBERON:0001103;2.39e-66;1!UBERON:0005090;5.04e-34;2!UBERON:0001630;5.04e-34;2!UBERON:0000020;1.33e-12;23!UBERON:0001032;3.97e-12;24!UBERON:0004456;3.97e-12;24!UBERON:0000165;1.47e-10;28!UBERON:0001443;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.74e-88,3;UBERON:0001033,9.74e-88,3;UBERON:0010056,9.74e-88,3;UBERON:0002426,2.39e-66,1;UBERON:0003831,2.39e-66,1;UBERON:0003898,2.39e-66,1;UBERON:0004830,2.39e-66,1;UBERON:0003830,2.39e-66,1;UBERON:0005175,2.39e-66,1;UBERON:0001774,2.39e-66,1;UBERON:0001103,2.39e-66,1;UBERON:0010084,2.39e-66,1;UBERON:0005090,5.04e-34,2;UBERON:0001630,5.04e-34,2;UBERON:0001042,2.38e-27,10;UBERON:0009145,2.38e-27,10;UBERON:0006562,5.49e-25,11;UBERON:0008814,9.05e-16,18;UBERON:0001557,5.27e-15,19;UBERON:0000166,4.01e-13,22;UBERON:0000020,3.97e-12,24;UBERON:0001032,3.97e-12,24;UBERON:0004456,3.97e-12,24;UBERON:0000165,3.10e-10,29;UBERON:0000930,3.10e-10,29;UBERON:0001004,4.40e-09,74;UBERON:0000161,1.85e-08,36;UBERON:0001443,2.47e-07,11;UBERON:0000072,1.00e-06,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0,1.08858373948481,4.44903291410865,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@TNNT3 | |||
}} |
Revision as of 06:05, 11 January 2014
Short description: | p23@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_23_at_TNNT3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 90bp_to_ENST00000493234_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 9.74e-88 | 3 |
gustatory system | 9.74e-88 | 3 |
future tongue | 9.74e-88 | 3 |
chest muscle | 2.39e-66 | 1 |
respiratory system muscle | 2.39e-66 | 1 |
skeletal muscle of trunk | 2.39e-66 | 1 |
respiratory system skeletal muscle | 2.39e-66 | 1 |
thoracic segment muscle | 2.39e-66 | 1 |
chest organ | 2.39e-66 | 1 |
muscle of trunk | 2.39e-66 | 1 |
diaphragm | 2.39e-66 | 1 |
future diaphragm | 2.39e-66 | 1 |
muscle structure | 5.04e-34 | 2 |
muscle organ | 5.04e-34 | 2 |
chordate pharynx | 2.38e-27 | 10 |
pharyngeal region of foregut | 2.38e-27 | 10 |
pharynx | 5.49e-25 | 11 |
pharyngeal arch system | 9.05e-16 | 18 |
upper respiratory tract | 5.27e-15 | 19 |
oral opening | 4.01e-13 | 22 |
sense organ | 3.97e-12 | 24 |
sensory system | 3.97e-12 | 24 |
entire sense organ system | 3.97e-12 | 24 |
mouth | 3.10e-10 | 29 |
stomodeum | 3.10e-10 | 29 |
respiratory system | 4.40e-09 | 74 |
orifice | 1.85e-08 | 36 |
chest | 2.47e-07 | 11 |
segment of respiratory tract | 1.00e-06 | 47 |