FFCP PHASE1:Hg19::chr11:2016865..2016913,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-62bp_to_BC010185_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_9_at_H19_5end | |||
|id=chr11:2016865..2016913,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.63e-13;19!CL:0000188;4.39e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.44e-13,19;CL:0000188,4.59e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.60e-11!14;UBERON:0000158!2.60e-11!14;UBERON:0001557!5.39e-11!19;UBERON:0001737!4.92e-10!9;UBERON:0003104!6.03e-10!238;UBERON:0009142!6.03e-10!238;UBERON:0000077!8.26e-09!130;UBERON:0003124!1.09e-08!7;UBERON:0004119!1.26e-08!169;UBERON:0000925!1.26e-08!169;UBERON:0006595!1.26e-08!169;UBERON:0004921!2.32e-08!129;UBERON:0004185!2.32e-08!129;UBERON:0000478!3.11e-08!24;UBERON:0000481!5.48e-08!347;UBERON:0004923!1.20e-07!57;UBERON:0001041!1.21e-07!98;UBERON:0001007!2.12e-07!155;UBERON:0001555!2.12e-07!155;UBERON:0007026!2.12e-07!155;UBERON:0000468!5.44e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.15e-16;16!UBERON:0002036;2.15e-16;16!UBERON:0001737;1.68e-14;9!UBERON:0001557;1.68e-14;9!UBERON:0000478;1.65e-13;24!UBERON:0005631;5.15e-11;10!UBERON:0000158;5.15e-11;10!UBERON:0001987;6.93e-08;4!UBERON:0000922;9.90e-08;49!UBERON:0002385;1.38e-07;31!UBERON:0001015;1.38e-07;31!UBERON:0000383;1.38e-07;31!UBERON:0000305;9.46e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.72e-17,14;UBERON:0000158,4.72e-17,14;UBERON:0001737,1.71e-14,9;UBERON:0000478,1.48e-13,24;UBERON:0003124,1.93e-12,7;UBERON:0001557,2.80e-12,19;UBERON:0001987,6.94e-08,4;UBERON:0004340,6.94e-08,4;UBERON:0004871,1.05e-07,8;UBERON:0001041,3.06e-07,87;UBERON:0003104,4.33e-07,160;UBERON:0009142,4.33e-07,160;UBERON:0004119,5.45e-07,160;UBERON:0000925,5.45e-07,160;UBERON:0006595,5.45e-07,160;UBERON:0004923,9.29e-07,66;UBERON:0000305,9.48e-07,7 | |||
|phase1_expression=3.08853244759946,0.856402095563933,0.704772020479856,5.00366491765652,2.68176656656373,21.8084631025092,2.53299878168311,0.631719873426831,0.261185628199839,0.737201809504527,0.697801167972428,27.0867301441414,26.6404648010738,0.123766352960047,2.98257638155124,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,2.32224184974114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0.511450247374121,0,0,0,1.5905718941022,5.35298357332899,0.189069634328136,0,0,0.392937226493138,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16745360156538,0,0,1.24484414159907,0,0.326923806226917,1.05950199351452,8.64263886719998,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.132529768321485,2.20768491452085,1.34759371519982,1.00928340350251,0,0,0,0,0,0,14.5517364049008,12.9810211360138,13.2556066435915,15.4411561825352,12.854887201452,15.1853196231102,15.5056004384189,14.5203884192756,15.0051391209092,0.738155454624648,0,3.7041661019826,23.5213938216867,1.26755034821831,0.982827216677626,3.54473944008842,0,0,0,0,0,0.100528972411631,2.59247646443883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.857867961948885,97.6718889704597,1.64648067356154,0,1.42156779497018,0,0,0,0,0,0,0,0,0,0,5.50168965336801,7.80810025691457,5.90901178691655,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.34960640891054,1.50051156317903,1.35632511849868,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0,20.1675192186623,38.4320634668159,0,0,0,42.1347324310301,109.847390076928,35.984444906232,4.71404834855676,0.306923946576125,3.36792113319688,1.28139149255701,1.02341449813341,0.64341568457443,16.325987308949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647747748306418,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,1.6068392984416,3.28680442193215,1.07834031980251,4.75861391651002,2.48105830472155,0.859361958946189,2.46528379654188,2.81247870473133,12.0193248123095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0.255897791311334,31.6674851145101,0,0,0,0.274537029736055,0,0,0,0,1.95053495635836,0,0,0,0,0,0,0,0,0.578775534266688,5.24715801637306,0,0.30982349809975,0,0,1.57198465620994,0,0,0,0.329294892959902,0.75894634753143,1.74967360122491,0,0,0,1.7887322147588,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,111.971163341977,49.8900663798833,195.661367237211,0,0,0,0,0.211125408127993,0.996239941255349,0.276283915531148,4.53478946137697,0,0,0,0,0,0,2.17015492401254,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,3.54581522651905,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0.23056390438806,15.7973454161199,8.47449500991663,72.0942620994138,4.76307485689684,176.434510862168,0,0,0,0.225595660617181,0,0.335643173951685,0,0,0,0,0,0,0,0.442287822516696,6.11030144933625,0,0,0,0.067401132980677,172.55419416924,0,0,0,0,1.57833761139756,33.8774004936259,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.969890164884194,0.264768380074501,6.32746074185491,0,0,0,3.12882212375685,0,0.213452994739353,67.7354576483421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51354161145029,0,4.30723814746088,0.399358000997982,3.004582336956,0.669514372325618,5.1059439089912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,4.14391246266485,0,0,0,3.57347663186684,10.5934715258469,1.017074150619,0,0,0,0,0,0,0,0.732761168390412,133.831957801344,0,0,0,0,0.427149650270779,2.35806457649499,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0.554805861502613,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.001804703105,0,0.673498977531838,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73246356019784,0,5.39124056983409,0,1.41972529649618,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.589848616738702,1.83428598521679,20.3325172424595,0,0,0,0.451261970095544,0,0,39.2860041722134,0,1.92212912082159,0.0675375846183947,0,0,0,0,0.548257766857182,8.435590032618,0,0.127762427639595,0,0,0,0,9.84596308805291,0,1.02892805662451,0,0,0,0,0.78493092850514,0.157115589916002,14.8544246556308,43.8316185844558,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,3.81048345171836,4.35303050233695,0,0,0,0,0,27.8394399990795,6.67308244565606,31.3149896461314,12.1427748264785,0,0,0,0,0,0,0,3.93407208907123,0,1.71603825227734,0.471353094203252,0,0,4.226557275834,0,0.0939839179798536,2.19156819110162,0,1.2498775702396,0,0,15.3370641531769,0,0,0.631086248772738,0,0,30.6835567498932,0.743990036333503,0.462175628631418,7.35465155610441,0,0.655593431782173,0.253397002022874,0.101988829741982,0,0,0,1.13668047327359,1.07185652062471,0,0,2.34557380091079,20.7116055373454,0.0645889098360061,0.869046000142011,0,0.381882949668989,18.392664195198,6.53150243690884,54.0728615714744,1.0776328482334,0.286888821570705,11.6431124791105,0.162806537221949,0,0,0,23.4640942403454,0.488965776731466,5.69654649642034,0.665756774185513,0.402547587182052,0 | |||
|short_description=p9@H19 | |||
}} |
Revision as of 06:06, 11 January 2014
Short description: | p9@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -62bp_to_BC010185_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.44e-13 | 19 |
cell of skeletal muscle | 4.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.72e-17 | 14 |
membranous layer | 4.72e-17 | 14 |
larynx | 1.71e-14 | 9 |
extraembryonic structure | 1.48e-13 | 24 |
chorion | 1.93e-12 | 7 |
upper respiratory tract | 2.80e-12 | 19 |
placenta | 6.94e-08 | 4 |
allantois | 6.94e-08 | 4 |
somatic layer of lateral plate mesoderm | 1.05e-07 | 8 |
foregut | 3.06e-07 | 87 |
mesenchyme | 4.33e-07 | 160 |
entire embryonic mesenchyme | 4.33e-07 | 160 |
endoderm-derived structure | 5.45e-07 | 160 |
endoderm | 5.45e-07 | 160 |
presumptive endoderm | 5.45e-07 | 160 |
organ component layer | 9.29e-07 | 66 |
amnion | 9.48e-07 | 7 |