FFCP PHASE1:Hg19::chr11:27062537..27062557,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8424 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=964 | |||
|TSSclassifier=strong | |||
|UniProt=O75936 | |||
|association_with_transcript=28bp_to_ENST00000263182,NM_003986,uc001mre.1_5end | |||
|coexpression_cluster_id=C2123 | |||
|description=CAGE_peak_9_at_BBOX1_5end | |||
|id=chr11:27062537..27062557,+ | |||
|ontology_enrichment_celltype=CL:0002623!2.27e-11!3;CL:0002251!3.48e-09!21;CL:0000622!5.70e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.64e-09;2!CL:0000575;1.64e-09;2!CL:0001016;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.33e-09,2;CL:0001016,1.33e-09,2;CL:0000575,1.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.44e-18;1!UBERON:0007123;2.18e-14;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.12e-17;1!DOID:3149;1.12e-17;1!DOID:3451;1.64e-09;2!DOID:4159;1.64e-09;2!DOID:0060122;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.70e-17,1;DOID:3149,1.70e-17,1;DOID:3451,2.02e-09,2;DOID:4159,2.02e-09,2;DOID:0060122,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.01e-12!115;UBERON:0006562!1.03e-10!11;UBERON:0000161!1.65e-09!35;UBERON:0000166!2.09e-09!21;UBERON:0000007!9.91e-09!2;UBERON:0001042!2.18e-08!10;UBERON:0009145!2.18e-08!10;UBERON:0000165!2.28e-08!28;UBERON:0000930!2.28e-08!28;UBERON:0003408!2.41e-08!10;UBERON:0001007!2.80e-08!155;UBERON:0001555!2.80e-08!155;UBERON:0007026!2.80e-08!155;UBERON:0000974!4.13e-08!10;UBERON:0008814!6.43e-08!15;UBERON:0003127!8.33e-08!2;UBERON:0001255!2.79e-07!2;UBERON:0001556!2.79e-07!2;UBERON:0004119!4.06e-07!169;UBERON:0000925!4.06e-07!169;UBERON:0006595!4.06e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.31e-34;2!UBERON:0003296;7.38e-18;4!UBERON:0010133;7.38e-18;4!UBERON:0005795;1.12e-17;1!UBERON:0002046;2.18e-14;5!UBERON:0001894;1.26e-10;7!UBERON:0002368;1.85e-07;33!UBERON:0000020;5.25e-07;23!UBERON:0001043;6.88e-07;3!UBERON:0001723;9.37e-07;3!UBERON:0001033;9.37e-07;3!UBERON:0001032;9.79e-07;24!UBERON:0004456;9.79e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.31e-34,2;UBERON:0003296,7.39e-18,4;UBERON:0010133,7.39e-18,4;UBERON:0002046,2.25e-14,5;UBERON:0004117,2.25e-14,5;UBERON:0007689,2.25e-14,5;UBERON:0007123,2.25e-14,5;UBERON:0003091,2.25e-14,5;UBERON:0001894,1.27e-10,7;UBERON:0006222,1.27e-10,7;UBERON:0008814,6.51e-09,18;UBERON:0002368,5.36e-08,35;UBERON:0009722,5.00e-07,11;UBERON:0007690,5.00e-07,11;UBERON:0001043,6.88e-07,3;UBERON:0009143,6.88e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.975966209950223,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,4.07353869251362,0,1.12990370390266,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,1.5476039091159,0,1.0063040627978,2.67939404817274,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,5.46269043812968,11.1554473762136,0,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0.85359238546975,0.691259661814092,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0.129177819672012,0.186224142887574,0,7.89224762649245,2.42540626749863,0.653150243690884,1.02669990325584,0.471464371102113,0.286888821570705,0.332660356546013,0.162806537221949,0,0,0,0,0.244482888365733,1.22068853494722,0,0.201273793591026,0 | |||
|short_description=p9@BBOX1 | |||
}} |
Revision as of 07:00, 11 January 2014
Short description: | p9@BBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BBOX1_5end |
Coexpression cluster: | C2123_pituitary_thyroid_esophagus_kidney_tongue_salivary_throat |
Association with transcript: | 28bp_to_ENST00000263182, NM_003986, uc001mre.1_5end |
EntrezGene: | BBOX1 |
HGNC: | 964 |
UniProt: | O75936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.33e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.33e-09 | 2 |
corneal epithelial cell | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.31e-34 | 2 |
gland of diencephalon | 7.39e-18 | 4 |
neuroendocrine gland | 7.39e-18 | 4 |
thyroid gland | 2.25e-14 | 5 |
pharyngeal pouch | 2.25e-14 | 5 |
thyroid diverticulum | 2.25e-14 | 5 |
pharyngeal pouch 2 | 2.25e-14 | 5 |
thyroid primordium | 2.25e-14 | 5 |
diencephalon | 1.27e-10 | 7 |
future diencephalon | 1.27e-10 | 7 |
pharyngeal arch system | 6.51e-09 | 18 |
endocrine gland | 5.36e-08 | 35 |
entire pharyngeal arch endoderm | 5.00e-07 | 11 |
early pharyngeal endoderm | 5.00e-07 | 11 |
esophagus | 6.88e-07 | 3 |
esophageal region | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.70e-17 | 1 |
keratoacanthoma | 1.70e-17 | 1 |
skin carcinoma | 2.02e-09 | 2 |
skin cancer | 2.02e-09 | 2 |
integumentary system cancer | 2.02e-09 | 2 |