FFCP PHASE1:Hg19::chr11:5247855..5247868,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_DQ655984_5end | |||
|coexpression_cluster_id=C478 | |||
|description=CAGE_peak_1_at_DQ655984_5end | |||
|id=chr11:5247855..5247868,+ | |||
|ontology_enrichment_celltype=CL:0000764!7.47e-16!2;CL:0000765!7.47e-16!2;CL:0000050!7.47e-16!2;CL:0000038!7.47e-16!2;CL:0000558!7.47e-16!2;CL:0000547!7.47e-16!2;CL:0000549!7.47e-16!2;CL:0000550!7.47e-16!2;CL:0000552!7.47e-16!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;7.72e-34;2!CL:0000558;7.72e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.10e-34,2;CL:0000765,7.10e-34,2;CL:0000050,7.10e-34,2;CL:0000038,7.10e-34,2;CL:0000558,7.10e-34,2;CL:0000547,7.10e-34,2;CL:0000549,7.10e-34,2;CL:0000550,7.10e-34,2;CL:0000552,7.10e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.47e-39!15;UBERON:0000179!9.47e-39!15;UBERON:0000463!9.47e-39!15;UBERON:0007023!1.07e-23!115;UBERON:0002390!5.79e-13!102;UBERON:0003061!5.79e-13!102;UBERON:0002193!1.46e-11!112;UBERON:0002106!3.31e-10!3;UBERON:0004854!3.31e-10!3;UBERON:0009034!3.31e-10!3;UBERON:0002095!3.31e-10!3;UBERON:0004782!3.31e-10!3;UBERON:0003281!3.31e-10!3;UBERON:0009664!3.31e-10!3;UBERON:0002296!3.31e-10!3;UBERON:0005602!3.31e-10!3;UBERON:0001179!3.31e-10!3;UBERON:0006293!3.31e-10!3;UBERON:0002426!1.27e-08!1;UBERON:0003831!1.27e-08!1;UBERON:0003898!1.27e-08!1;UBERON:0004830!1.27e-08!1;UBERON:0001774!1.27e-08!1;UBERON:0003830!1.27e-08!1;UBERON:0005175!1.27e-08!1;UBERON:0003897!1.27e-08!1;UBERON:0001103!1.27e-08!1;UBERON:0010084!1.27e-08!1;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.42e-88;15!UBERON:0000179;3.42e-88;15!UBERON:0000463;3.42e-88;15!UBERON:0002390;1.32e-37;32!UBERON:0002193;6.66e-21;42!UBERON:0002426;1.70e-17;1!UBERON:0003831;1.70e-17;1!UBERON:0003898;1.70e-17;1!UBERON:0004830;1.70e-17;1!UBERON:0003830;1.70e-17;1!UBERON:0005175;1.70e-17;1!UBERON:0001774;1.70e-17;1!UBERON:0001103;1.70e-17;1!UBERON:0005090;2.02e-09;2!UBERON:0001630;2.02e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.59e-88,15;UBERON:0000179,3.59e-88,15;UBERON:0000463,3.59e-88,15;UBERON:0002426,1.70e-17,1;UBERON:0003831,1.70e-17,1;UBERON:0003898,1.70e-17,1;UBERON:0004830,1.70e-17,1;UBERON:0003830,1.70e-17,1;UBERON:0005175,1.70e-17,1;UBERON:0001774,1.70e-17,1;UBERON:0001103,1.70e-17,1;UBERON:0010084,1.70e-17,1;UBERON:0007023,9.42e-17,114;UBERON:0002390,6.76e-13,98;UBERON:0003061,6.76e-13,98;UBERON:0004535,1.20e-11,109;UBERON:0002193,1.20e-11,108;UBERON:0001009,2.57e-11,112;UBERON:0005090,2.02e-09,2;UBERON:0001630,2.02e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89335555925364,12.2874661981703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1936378400364,10.7049208999933,22.2162402997923,9.52927101831156,4.93634727703433,7.13320642311989,8.64050299580984,32.5181322280651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,253.852077887756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@DQ655984 | |||
}} |
Revision as of 06:18, 11 January 2014
Short description: | p1@DQ655984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_DQ655984_5end |
Coexpression cluster: | C478_blood_Whole_Reticulocytes_liver_skeletal_lung_Neutrophils |
Association with transcript: | 0bp_to_DQ655984_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.10e-34 | 2 |
erythroblast | 7.10e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 7.10e-34 | 2 |
erythroid progenitor cell | 7.10e-34 | 2 |
reticulocyte | 7.10e-34 | 2 |
proerythroblast | 7.10e-34 | 2 |
basophilic erythroblast | 7.10e-34 | 2 |
polychromatophilic erythroblast | 7.10e-34 | 2 |
orthochromatic erythroblast | 7.10e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.59e-88 | 15 |
haemolymphatic fluid | 3.59e-88 | 15 |
organism substance | 3.59e-88 | 15 |
chest muscle | 1.70e-17 | 1 |
respiratory system muscle | 1.70e-17 | 1 |
skeletal muscle of trunk | 1.70e-17 | 1 |
respiratory system skeletal muscle | 1.70e-17 | 1 |
thoracic segment muscle | 1.70e-17 | 1 |
chest organ | 1.70e-17 | 1 |
muscle of trunk | 1.70e-17 | 1 |
diaphragm | 1.70e-17 | 1 |
future diaphragm | 1.70e-17 | 1 |
adult organism | 9.42e-17 | 114 |
hematopoietic system | 6.76e-13 | 98 |
blood island | 6.76e-13 | 98 |
cardiovascular system | 1.20e-11 | 109 |
hemolymphoid system | 1.20e-11 | 108 |
circulatory system | 2.57e-11 | 112 |
muscle structure | 2.02e-09 | 2 |
muscle organ | 2.02e-09 | 2 |