FFCP PHASE1:Hg19::chr11:72853550..72853560,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9873 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29114 | |||
|TSSclassifier=weak | |||
|UniProt=O94868 | |||
|association_with_transcript=-244bp_to_ENST00000409418_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_FCHSD2_5end | |||
|id=chr11:72853550..72853560,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;7.49e-10;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.58e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;7.37e-14;10!DOID:3095;1.91e-09;22!DOID:2994;1.91e-09;22!DOID:169;3.24e-08;6!DOID:3307;5.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.09e-14,10;DOID:3095,9.34e-10,22;DOID:2994,9.34e-10,22;DOID:169,2.64e-08,6;DOID:3307,1.89e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.74e-19!115;UBERON:0000073!6.65e-16!94;UBERON:0001016!6.65e-16!94;UBERON:0001017!7.41e-15!82;UBERON:0005743!7.03e-14!86;UBERON:0001049!2.95e-13!57;UBERON:0005068!2.95e-13!57;UBERON:0006241!2.95e-13!57;UBERON:0007135!2.95e-13!57;UBERON:0000955!3.93e-12!69;UBERON:0006238!3.93e-12!69;UBERON:0002346!7.50e-11!90;UBERON:0002616!2.47e-10!59;UBERON:0003080!8.22e-10!42;UBERON:0003075!2.09e-09!86;UBERON:0007284!2.09e-09!86;UBERON:0002780!2.97e-09!41;UBERON:0001890!2.97e-09!41;UBERON:0006240!2.97e-09!41;UBERON:0000924!2.26e-08!173;UBERON:0006601!2.26e-08!173;UBERON:0001893!1.59e-07!34;UBERON:0004121!2.55e-07!169;UBERON:0002791!3.95e-07!33;UBERON:0002020!4.86e-07!34;UBERON:0003528!4.86e-07!34;UBERON:0000153!7.70e-07!129;UBERON:0007811!7.70e-07!129;UBERON:0002619!8.55e-07!22;UBERON:0001869!9.53e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.49e-10;5!UBERON:0002410;7.49e-10;5!UBERON:0000010;3.64e-08;8!UBERON:0002346;2.46e-07;4!UBERON:0000923;2.46e-07;4!UBERON:0010316;2.46e-07;4!UBERON:0005291;2.46e-07;4!UBERON:0002370;5.60e-07;2!UBERON:0003714;5.60e-07;2!UBERON:0005162;5.60e-07;2!UBERON:0000122;5.60e-07;2!UBERON:0005058;5.60e-07;2!UBERON:0009113;5.60e-07;2!UBERON:0001016;6.81e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.63e-13,89;UBERON:0000013,5.83e-10,5;UBERON:0002410,5.83e-10,5;UBERON:0002346,2.69e-09,86;UBERON:0001017,4.36e-09,81;UBERON:0004121,1.38e-08,171;UBERON:0000924,1.38e-08,171;UBERON:0006601,1.38e-08,171;UBERON:0007023,1.44e-08,114;UBERON:0000010,2.73e-08,8;UBERON:0001049,1.32e-07,56;UBERON:0005068,1.32e-07,56;UBERON:0006241,1.32e-07,56;UBERON:0007135,1.32e-07,56;UBERON:0003714,2.76e-07,2;UBERON:0000073,5.43e-07,53;UBERON:0002616,5.43e-07,53;UBERON:0005162,8.15e-07,2;UBERON:0000122,8.15e-07,2;UBERON:0003075,8.59e-07,82;UBERON:0007284,8.59e-07,82 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0.572471974262113,0,0.251085279189606,0.764134057479513,0.738905305049512,0.550975469195755,0,0,0.309632246632152,0,0,0,0.387336002901508,0.426507697462265,1.17440175733939,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0.77272670290256,0.290796477559129,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,1.09227722252426,1.77901850772711,0.426730222566507,0,0.574752439954483,1.32208974556972,0,2.27685187643779,2.34894875748376,0.764546456250458,1.32171328579026,0,0,0.786839080455332,0.786021525498329,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0,0.289803085735052,0.444859689486181,1.07016331235885,0,0.226618685395132,0.383220493601921,0.68725489096526,0.253019692019503,0.637130828648193,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0.236777252044017,0,1.61285394579786,0,0.724122019413995,2.43806866313962,0,0,0.361439152384566,0,0,0,0.486634870302636,0.283604451492204,0,0.351339142772504,1.24430121722827,0,0,0,0,0.132957960518865,0.715471872916026,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0,0,0,0,0,0,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0.149448680551801,0,0,0.280901613404497,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.368965315629341,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0.246217006087397,0.468008530278475,0,0,0,0,0,0,0,0,0.352193736052904,0.414656231081544,0.288239906833923,1.13618190083742,0.063497894292169,0,0,0,0,0.300343057843917,0.857479297891735,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.431255149719035,0.385029108839245,0.254094624222463,2.60279707715243,2.31986643833309,1.67516265334349,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0,0,0,0,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,0.82707210449155,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.241718899183244,0,0.184161977871793,0.114814448164607,0.364182336013434,0,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0.309123034943167,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0.318203247925937,0,0,0.54907405947211,0,0,0,0.421258456238981,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,1.58625035258854,0.320472213382419,0.962479855263359,0,0.185803175125719,0.28853842595289,0.142283686696828,0.159426272728822,0.798317485731266,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0.425846237690326,0.343505344755765,0.307240764308458,0,0,0,0.556812347790485,0,0.270455678475983,0.66614393599564,0,0,0.73254089635947,0.485442086998054,0,0.568272293612826,0,0.593929361665277,0,0,0.562677665642051,0.445234820091624,0,0.211125408127993,1.19548792950642,1.38141957765574,0.251932747854276,0.511343412510774,0.861593638227486,0,0.539210106883961,0.179021174675609,0,0,0,1.11136990144637,0,0.463840490809256,7.98455192004777,0,0,2.17499872630438,0.227586896570999,0,0,0.689486746482929,0.291604613383254,1.21537496453305,0,0.723578631752448,3.05163472634166,1.87984741883082,2.36438095162838,0.658156191461918,0.10893846351899,0,1.46205491157214,0.341826167541004,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,2.98578579323551,0.796118080530053,0,0.889563386041866,0.123563938946503,0,1.07841812769083,0,0.702793337176017,0.729819156862664,0.19566461893209,0,0.789168805698781,1.20990716048664,9.1821828489147,0.884612114798832,0.300646838828985,0.414752765588989,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.435296032902013,0.34945333648406,0.687944129886466,0.19351266257817,0.146178634172371,0.164230914106418,0.484945082442097,0.970817393606503,0.677942222341597,0.137041924646751,0.397429223405979,0.886351143382302,0.195551382734803,0.0801588202515337,0.426905989478705,0.19980960958213,0.144090417154106,0.572682980829578,1.20116498503375,0,0,0,0.407712618220842,0.209205692624666,0.101998217636322,0.577901179803038,0,0.547621515567972,5.10986352267889,0,0.525774708558629,0.279282401272254,0.687481272035051,1.43574604915363,0.199679000498991,0,0.446342914883745,0.671834724867263,0,0,0.0787831823072236,0.412079291905832,0.404421263125109,0.0984274815147488,0.0846733320657845,0.795229689809303,1.22583065500418,0.160753148465019,0,0,0.674921674654501,0,0.971992906528395,0.335434687599266,0.551639951094387,0.891727998294968,0,0.179287339332845,0.383830394638891,0,0,0.76280561296425,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.679872549120754,0,0,1.29282956361551,0.13223260174269,0,0,0.320362237703084,0.943225830597996,0.414239055347196,0,0.197611631897944,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0.471162288750703,0,0.244052529803926,0.500763722825999,0,0.665574309221114,0.745156835296601,1.38348634936231,0.37494122388632,0.151649117541648,0,0,2.34167452903441,0.724605143054126,0.149254802886874,0,0.554805861502613,0,0,0.889811221596536,0,0.302461847526478,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0.800055529326307,0,0,0,0.57785949122191,0,0,0.226705925512272,0,0.489473409012935,0.179088841081487,0,0,0.530067437837643,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0.829550616910385,0,0.265729680626726,0.817826971279221,0,0,0,0.79994958341972,0,0,0,0.184105950251841,0,0,1.53473245564382,0.431299245586727,1.10086159299127,1.31051565830417,0.33946505990805,1.91317428091515,1.85903646388503,1.67593475391973,0,0.157723490002507,0,0.705351887381368,0,0.578063025868136,0,0.638535436228605,1.23069818544453,8.82250936776013,0.553258019713743,0.807378228159255,1.42769420259154,0.294443155503077,0.235939446695481,0,0.231051332300676,0,0,0.198916222116275,0.902523940191087,0,0,0.523813388962845,0.49131575253029,0.147856086217045,0.742913430802341,0,0.413373593002368,0.380494861163441,7.65764732625507,0,0.496211178389294,1.05522746615772,0.255524855279191,0.535701835878287,0.672567444437648,0.606965604236632,1.82129753081038,0.354809480650555,0,0.685952037749674,0.951576261675644,1.18390992413128,0,0.444925607568277,1.0989032999072,0.157115589916002,0.280272163313789,0.913158720509496,0,0.47775168788705,1.21510125100316,0.316027223465453,0.348724276104376,0.173858272302579,1.60342272946051,0,0.17071847709395,0,0.860454717640555,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0.307988420568741,2.3196288626764,0.485710993059139,0.935757853848423,1.19370465096821,0.594600453887843,0,0.219881033490858,0.452888530700021,0.154348316215889,0.437119121007915,0,0.490296643507811,0.235676547101626,0.588925401344836,0.297046400327086,1.2679671827502,0.169927114687817,0.469919589899268,0.386747327841463,0.0999411559249289,0,0,0,0,0.458729283404541,0.573358332605805,0.631086248772738,0.679914901909147,5.23620828408453,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0.101988829741982,0,0,0,1.36401656792831,3.48353369203032,0,0.620597975171371,0.639701945702943,0.23806443146374,1.87307838524418,1.11734485732544,0.224263725161227,0.636471582781649,0.606351566874658,0.217716747896961,0,0.606168477131288,0.286888821570705,0.332660356546013,0.325613074443898,0.320182037633146,1.9307228228694,0.449126010532934,0,2.2003459952916,0.406896178315738,0.665756774185513,0.603821380773079,0 | |||
|short_description=p10@FCHSD2 | |||
}} |
Revision as of 09:18, 11 January 2014
Short description: | p10@FCHSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FCHSD2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -244bp_to_ENST00000409418_5end |
EntrezGene: | FCHSD2 |
HGNC: | 29114 |
UniProt: | O94868 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.63e-13 | 89 |
sympathetic nervous system | 5.83e-10 | 5 |
autonomic nervous system | 5.83e-10 | 5 |
neurectoderm | 2.69e-09 | 86 |
central nervous system | 4.36e-09 | 81 |
ectoderm-derived structure | 1.38e-08 | 171 |
ectoderm | 1.38e-08 | 171 |
presumptive ectoderm | 1.38e-08 | 171 |
adult organism | 1.44e-08 | 114 |
peripheral nervous system | 2.73e-08 | 8 |
neural tube | 1.32e-07 | 56 |
neural rod | 1.32e-07 | 56 |
future spinal cord | 1.32e-07 | 56 |
neural keel | 1.32e-07 | 56 |
neural tissue | 2.76e-07 | 2 |
regional part of nervous system | 5.43e-07 | 53 |
regional part of brain | 5.43e-07 | 53 |
multi cell component structure | 8.15e-07 | 2 |
neuron projection bundle | 8.15e-07 | 2 |
neural plate | 8.59e-07 | 82 |
presumptive neural plate | 8.59e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.09e-14 | 10 |
germ cell and embryonal cancer | 9.34e-10 | 22 |
germ cell cancer | 9.34e-10 | 22 |
neuroendocrine tumor | 2.64e-08 | 6 |
teratoma | 1.89e-07 | 2 |