FFCP PHASE1:Hg19::chr12:10875351..10875422,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-356bp_to_ENST00000540747_5end | |||
|description=CAGE_peak_4_at_CSDA_5end | |||
|id=chr12:10875351..10875422,- | |||
|ontology_enrichment_celltype=CL:0000012!5.22e-22!682;CL:0000548!6.30e-21!679;CL:0000004!6.30e-21!679;CL:0000255!6.30e-21!679;CL:0000144!1.47e-17!625;CL:0002371!2.35e-17!591;CL:0000063!9.89e-16!578;CL:0000003!2.94e-14!722;CL:0000066!6.37e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.96e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!8.84e-08!95;UBERON:0001637!1.28e-07!42;UBERON:0003509!1.28e-07!42;UBERON:0004572!1.28e-07!42;UBERON:0000486!1.55e-07!82;UBERON:0001009!1.62e-07!113;UBERON:0000055!2.45e-07!69;UBERON:0000926!3.37e-07!448;UBERON:0004120!3.37e-07!448;UBERON:0006603!3.37e-07!448;UBERON:0004535!3.37e-07!110;UBERON:0000914!4.30e-07!83;UBERON:0002329!4.30e-07!83;UBERON:0003077!4.30e-07!83;UBERON:0003059!4.30e-07!83;UBERON:0007282!4.30e-07!83;UBERON:0009618!4.30e-07!83;UBERON:0007285!4.30e-07!83;UBERON:0004290!4.65e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.06e-08,99;UBERON:0001637,7.02e-08,42;UBERON:0003509,7.02e-08,42;UBERON:0004572,7.02e-08,42;UBERON:0000055,2.28e-07,68 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.845726424575827,0,0,1.74467704820074,2.53299878168311,7.58063848112197,0.261185628199839,2.45733936501509,0.697801167972428,0.655324116390517,0.263766978228454,0.495065411840187,0.994192127183747,0.672325146451775,1.80808358407193,2.19093027116212,1.95173119516203,0.61560529038394,0.408001382488506,0.313454721478088,0,0.958120975510189,0,0.382067028739756,0.656804715599566,0.944529375764151,5.11373559903575,2.30297638858328,2.63187409637329,5.51652734687356,3.31326510656075,4.06729411183466,0.619737604642413,0.426507697462265,2.34880351467878,5.53995408531877,5.21415563422368,7.16135873362311,0,0,0,0.726991193897824,0.755751887377619,0.485168122375632,0.232429036905685,1.6446715520873,2.47765096716083,0,0.768482119587302,2.36482229888585,0.689491361473237,0.645484683583826,4.06279459783025,1.50593871634084,0.545812300115692,0.674170453335254,0.612167784741805,0.962787081228281,3.19668562899521,0.989553900560148,1.39624560335142,1.27867425159808,1.45104619314292,1.70215567407342,2.4912889959823,2.00998932205395,1.5644487552606,1.3031330682307,0,1.47311054395026,1.26584954976354,0.422510572623884,0.850417199860174,0.628975936525128,0.561643155732475,0.901061357049038,0.48217676009124,1.71007646244749,0.39783335439818,0,1.75996244461323,2.73069305631066,0.889509253863555,0.853460445133014,1.20118796110804,1.14950487990897,0.661044872784862,2.86216126360609,2.27685187643779,2.93618594685469,0.382273228125229,5.28685314316103,2.24203425192614,0.790152254325231,0,0,0.205601498999509,0.668745981562712,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0.384273959177026,0.390178042679635,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0.68725489096526,0,0.95569624297229,1.30216690771284,0,0.752875595388864,0.255973222308837,1.24930726552346,0.473554504088034,0.821127996921047,3.02410114837099,6.15112450302067,5.64815175142916,2.43806866313962,0.670700859703636,0.511450247374121,4.3372698286148,2.50668955317945,1.30361867064741,3.1811437882044,1.45990461090791,0.378139268656271,0.665188192387692,0.614843499851882,0.785874452986276,2.18577172975525,4.07862887062872,0,0,0,0.238490624305342,0.571994910780128,0,3.57772333260069,3.4409383804245,2.08284300964557,2.82653970962005,3.35599548967925,2.75118041940067,4.38889429727302,0.775250277507987,1.06729878806013,2.34304428935269,0,1.52054421143703,0.732186172644509,1.10298924103761,1.62028389576352,1.07159673940896,0.673588117878509,1.57656072676651,1.53316637465883,1.89853131913626,1.28241220751285,0,7.75560528296651,2.18047026071267,0.993943903390637,1.13967460498122,1.32409180813219,0.286836620748814,2.12801029319014,2.80338800071154,3.20246987189115,0.98667019366864,0,1.61652806483626,1.9615428373615,0,0,8.66989297785048,5.30672130611545,4.56377457235559,6.42629326372745,2.3486899728753,3.56120477609889,2.10676210053373,0.816616685019573,1.47401180774122,1.13658359293342,0,0.741800787835671,2.73048408581408,5.03032699271367,1.5150250255866,1.87677779807946,2.21651292387346,1.31693286264251,1.22595118319608,1.05166641234618,1.81491493056034,1.61450672119976,1.49490172172997,2.11931901159562,1.80054657650641,1.33968288009971,0.772921620136887,0.744467425326359,0.843881661206331,0.779496041289589,0.504867548488229,1.38074847963449,0.484938170456436,2.13005755509969,2.01504196455281,1.86516651541536,1.15956511897978,1.36373060295417,3.15485054927904,0.365921118388786,0.265059536642971,0.348581828608555,0.310983165046111,0,0.36497735907583,1.56449532329816,0,1.38134921352481,1.39310378409594,0.721879481669586,1.53798840051797,0.842923450390509,0.723033089650446,1.43382164552112,1.96091499683166,1.42362371466658,1.75280700608214,1.96221465125346,0.769494313892781,1.4763109092493,0,0.8231480226628,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.514703430895577,3.18275827685014,3.37205259772859,4.2222168412885,1.85176890317059,8.14520763275812,4.15973914111831,1.44331342025273,0,0.352226082707465,1.73239737313289,3.24089858803628,1.71228737011138,0,0,0,0,0.594524649154913,3.74935335947108,0.503946384596579,2.1266264586358,6.44821363460508,3.77824120068151,3.06706143332169,0,0,1.65862492432618,0.864719720501769,1.76739406796932,0.507983154337352,0,0,1.71072446022705,1.33675740514321,1.8020583470635,0.285826432630578,2.35475277125258,0,2.933531432838,0.904902010304444,0,2.535908257668,0.797814349754612,2.08014873822732,3.34369586540785,1.41849132023278,2.66422179016099,0.714889968290738,0.542621605391443,1.64648067356154,3.25736184293735,0,1.58390374586686,0.602878754119172,0,0.499864955910285,0,0.502257091432126,0,2.15662369942424,1.14861935834114,0,0.434343920002738,1.43833425785268,1.79060963239896,1.56919201590938,2.75843064282698,2.15627574859517,2.43851768931522,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0.12269149171914,1.50051156317903,0.542530047399471,0.831883446123229,1.42743191037729,2.20783381047509,1.99140405487612,1.2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| |||
|short_description=p4@CSDA | |||
}} |
Revision as of 12:09, 11 January 2014
Short description: | p4@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSDA_5end |
Coexpression cluster: | NA |
Association with transcript: | -356bp_to_ENST00000540747_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.96e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.06e-08 | 99 |
artery | 7.02e-08 | 42 |
arterial blood vessel | 7.02e-08 | 42 |
arterial system | 7.02e-08 | 42 |
vessel | 2.28e-07 | 68 |