FFCP PHASE1:Hg19::chr12:80083544..80083558,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=251bp_to_ENST00000547571_5end | |||
|description=CAGE_peak_13_at_PAWR_5end | |||
|id=chr12:80083544..80083558,- | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-23!254;CL:0000077!2.28e-11!19;CL:0000076!2.50e-09!62;CL:0002321!1.78e-08!248;CL:0000220!5.82e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.85e-14;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.95e-17,253;CL:0000077,3.32e-14,19;CL:0002321,1.83e-09,250;CL:0000076,9.87e-08,63;CL:0000213,6.97e-07,58;CL:0000215,6.97e-07,58;CL:0002322,8.54e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.84e-15!106;DOID:0050687!5.97e-15!143;DOID:14566!1.32e-10!239;DOID:162!1.33e-10!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.98e-09,143;DOID:162,3.44e-07,235;DOID:305,4.32e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003886!2.76e-11!63;UBERON:0002553!1.02e-09!70;UBERON:0000464!1.94e-08!104;UBERON:0002323!4.14e-08!46;UBERON:0005156!5.54e-08!59;UBERON:0000990!5.54e-08!59;UBERON:0000466!1.38e-07!126;UBERON:0004458!1.48e-07!49;UBERON:0000991!2.25e-07!21;UBERON:0009196!2.25e-07!21;UBERON:0009117!2.25e-07!21;UBERON:0005564!2.25e-07!21;UBERON:0003064!2.48e-07!37;UBERON:0004176!4.46e-07!22;UBERON:0003101!8.95e-07!22;UBERON:0000079!8.95e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.63510541343501,2.14100523890983,1.12763523276777,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0,0.737201809504527,0,0.218441372130172,0.527533956456907,0.123766352960047,0,2.01697543935533,1.20538905604795,2.92124036154949,1.46379839637152,0.492484232307152,0.612002073732759,0.313454721478088,0.85870796139317,2.18999080116615,1.50651167513763,0.458480434487708,0.656804715599566,0.787107813136792,0,0,0,0,0.6024118375565,1.10926203050036,0.697204805222715,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0.800791974072025,0,0,0,2.27685187643779,2.93618594685469,0.764546456250458,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.383587685530591,0.361439152384566,1.00267582127178,0.869079113764942,0,0,0.850813354476611,2.66075276955077,2.45937399940753,0.196468613246569,0,2.22470665670658,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,1.92582629358047,0.417989933073621,0.516833518338658,0.35576626268671,0.66944122552934,0.402829317109147,0,1.95249646038536,0.367663080345869,0.81014194788176,0.803697554556718,1.12264686313085,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,1.49091585508596,1.2663051166458,0,0.573673241497627,1.06400514659507,1.12135520028461,1.06748995729705,0.98667019366864,0,0.538842688278752,0.653847612453835,0,1.15235184896,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.491337269247072,0.206651562351531,1.18800285728205,1.7308685049499,0,0,0,0.500474079487857,0,0,1.83892677479412,0.150238058906597,0.453728732640084,0.358779271377724,1.2813443329114,1.05965950579781,0.600182192168805,0.721367704669072,1.03056216018252,0.18611685633159,0.337552664482532,0.876933046450788,1.00973509697646,0.460249493211497,0.161646056818812,0.710019185033229,0.806016785821122,0.339121184620975,0,0,0,2.19552671033272,1.85541675650079,2.32387885739037,2.07322110030741,2.77552935963191,2.18986415445498,0,1.92972281457866,0,2.3218396401599,0,1.53798840051797,2.19160097101532,1.92808823906786,1.54411561825352,1.08939722046203,0.237270619111097,1.21348177344148,0.784885860501384,0.769494313892781,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.860919069801795,0.171567810298526,0.768251997860379,0,2.41269533787914,0.740707561268237,0,0,4.3299402607582,0.463721619900307,0.469634776943287,1.29929802984966,2.31492756288305,2.47330397904978,1.58040879591855,0.858486162094873,0,0,0,0,0.335964256397719,0,0.716468181622786,1.16253575405585,0,0,0,0,0,0,0,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0.571652865261156,0.224262168690721,0.87192013766656,0.36669142910475,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,1.00084595560703,0,0,0,0.710783897485092,1.58390374586686,0.904318131178758,0.871533458600294,3.09916272664377,0,0,0,0.958499421966331,1.14861935834114,0,0.434343920002738,1.2328579353023,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,2.28767947683888,5.53129865271201,2.83864347061082,1.40569697991256,0.300946099727719,0,0,1.32845119707087,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.767309866440312,3.64858122762996,0.384417447767103,1.02341449813341,2.41280881715411,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.362578348774867,1.20303882181971,4.60404944679482,0.459257792658427,0.910455840033585,0.393373244878272,0.902399225814824,1.07821471946181,1.56869953835371,2.92278449306521,0.949964660035881,3.4120015221269,0.510281115829547,3.02282282542995,1.54227252690289,0.270946437543853,1.00337954770971,0.509752546090077,1.66215201785745,1.11937377361089,0,0,0,0,0.325378394664303,0,0.54941678891006,0.330037999682352,0,1.95018073810956,1.6068392984416,0,0.308097234229289,0.307007349452259,0,0.107420244868274,0.290033387828457,0.255679882248303,0,1.32227932288782,1.34533047155574,1.02090169995667,1.11273558941105,0.929691098594572,0.62962469366128,0,0,0,0,0,2.00374841438788,1.116475108079,0,0.190630193923825,0,0,0,2.35484592059769,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0.272999822815972,1.55545975149084,0,0,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0.384888450902048,0,0,0.188287601553558,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0.411362273086194,0,0,0,0.747768497892312,0,0.980160863924127,0.371606350251437,0,0.497992903438899,0,0,0,0,0.324621940274555,1.40398589056729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0.36408156524854,0,1.13654458722565,0.71623345421307,0.890894042497916,0.614321404198464,0,0,0.222617410045812,0.329607748453519,0.63337622438398,1.19548792950642,0,0.503865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| |||
|short_description=p13@PAWR | |||
}} |
Revision as of 14:53, 11 January 2014
Short description: | p13@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PAWR_5end |
Coexpression cluster: | NA |
Association with transcript: | 251bp_to_ENST00000547571_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.95e-17 | 253 |
mesothelial cell | 3.32e-14 | 19 |
embryonic cell | 1.83e-09 | 250 |
squamous epithelial cell | 9.87e-08 | 63 |
lining cell | 6.97e-07 | 58 |
barrier cell | 6.97e-07 | 58 |
embryonic stem cell | 8.54e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.98e-09 | 143 |
cancer | 3.44e-07 | 235 |
carcinoma | 4.32e-07 | 106 |