FFCP PHASE1:Hg19::chr15:56537291..56537312,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr15:56537291..56537312,- | |||
|id=chr15:56537291..56537312,- | |||
|ontology_enrichment_celltype=CL:0000181!4.99e-10!12;CL:0000417!4.99e-10!12;CL:0000668!4.99e-10!12;CL:0000414!4.99e-10!12;CL:0000412!4.99e-10!12;CL:0000182!4.99e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.51e-26;12!CL:0002535;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.39e-26,12;CL:0000223,1.58e-07,58;CL:0002535,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.04e-28;11!UBERON:0009497;2.62e-24;13!UBERON:0001041;1.58e-10;30!UBERON:0003104;3.59e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.18e-13;1!DOID:4549;1.18e-13;1!DOID:5861;1.18e-13;1!DOID:6496;1.18e-13;1!DOID:3493;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.42e-13,1;DOID:4549,1.42e-13,1;DOID:5861,1.42e-13,1;DOID:6496,1.42e-13,1;DOID:3493,2.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!4.23e-13!26;UBERON:0009497!2.45e-10!25;UBERON:0000015!2.45e-10!25;UBERON:0002423!2.45e-10!25;UBERON:0006235!2.45e-10!25;UBERON:0004161!2.45e-10!25;UBERON:0004921!2.94e-09!129;UBERON:0004185!2.94e-09!129;UBERON:0002107!4.38e-09!19;UBERON:0006925!4.38e-09!19;UBERON:0008836!4.38e-09!19;UBERON:0008835!6.83e-09!22;UBERON:0003894!6.83e-09!22;UBERON:0003929!1.16e-08!54;UBERON:0005172!2.18e-08!55;UBERON:0005173!2.18e-08!55;UBERON:0009854!2.20e-08!23;UBERON:0005409!2.61e-08!35;UBERON:0002368!1.24e-07!35;UBERON:0007499!1.70e-07!25;UBERON:0001007!2.73e-07!155;UBERON:0001555!2.73e-07!155;UBERON:0007026!2.73e-07!155;UBERON:0009856!4.17e-07!26;UBERON:0002417!4.53e-07!61;UBERON:0000916!4.53e-07!61;UBERON:0002365!8.66e-07!31;UBERON:0002330!8.66e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.53e-23;19!UBERON:0006925;1.53e-23;19!UBERON:0002423;7.80e-18;25!UBERON:0002365;1.63e-13;31!UBERON:0002330;1.63e-13;31!UBERON:0002368;4.54e-13;33!UBERON:0002108;8.29e-11;4!UBERON:0000949;1.04e-08;43!UBERON:0006955;1.81e-07;2!UBERON:0004801;1.81e-07;2!UBERON:0000160;9.02e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.34e-23,19;UBERON:0006925,1.34e-23,19;UBERON:0008836,1.34e-23,19;UBERON:0008835,2.37e-20,22;UBERON:0003894,2.37e-20,22;UBERON:0009854,1.86e-19,23;UBERON:0007499,7.03e-18,25;UBERON:0009497,7.03e-18,25;UBERON:0000015,7.03e-18,25;UBERON:0002423,7.03e-18,25;UBERON:0006235,7.03e-18,25;UBERON:0004161,7.03e-18,25;UBERON:0009856,3.51e-17,26;UBERON:0002365,2.30e-14,31;UBERON:0002330,2.30e-14,31;UBERON:0002368,1.10e-12,35;UBERON:0003929,6.92e-11,54;UBERON:0002108,7.89e-11,4;UBERON:0000949,8.60e-10,45;UBERON:0005172,4.25e-08,54;UBERON:0005173,4.25e-08,54;UBERON:0004921,1.63e-07,118;UBERON:0002530,2.23e-07,59;UBERON:0006955,2.40e-07,2;UBERON:0004801,2.40e-07,2;UBERON:0002417,3.00e-07,60;UBERON:0000916,3.00e-07,60;UBERON:0005911,5.92e-07,82;UBERON:0000160,8.84e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,1.55991119954897,1.25937250101887,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.25618263945135,0,0.328875809207352,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.557409525377156,0,0.0711418433484141,0.478278818186467,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0.36408156524854,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,1.0077309914171,0,0.246169610922139,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0.424059214301822,0.216388639742091,0,0.619202951523374,0.611030144933625,0.889563386041866,0.123563938946503,0.730953646538188,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0.0969890164884194,1.235585773681,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.288180834308212,0.343609788497747,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,12.4477428045413,12.4447946155561,16.3790611565669,0.0984274815147488,0,0,0,0,0,0.415440338029185,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.732761168390412,1.32506888912221,0,0,0.342173675768659,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21917924982269,0,0.307988420568741,0,0,0,0,0,0,0,0.150962843566674,1.77500563648273,1.09279780251979,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,0.399764623699716,0,0.352894871715692,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:56537291..56537312,- | |||
}} |
Revision as of 23:43, 11 January 2014
Short description: | p@chr15:56537291..56537312, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56537291..56537312, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.39e-26 | 12 |
endodermal cell | 1.58e-07 | 58 |
epithelial cell of cervix | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.34e-23 | 19 |
digestive gland | 1.34e-23 | 19 |
liver bud | 1.34e-23 | 19 |
hepatic diverticulum | 2.37e-20 | 22 |
liver primordium | 2.37e-20 | 22 |
digestive tract diverticulum | 1.86e-19 | 23 |
epithelial sac | 7.03e-18 | 25 |
epithelium of foregut-midgut junction | 7.03e-18 | 25 |
anatomical boundary | 7.03e-18 | 25 |
hepatobiliary system | 7.03e-18 | 25 |
foregut-midgut junction | 7.03e-18 | 25 |
septum transversum | 7.03e-18 | 25 |
sac | 3.51e-17 | 26 |
exocrine gland | 2.30e-14 | 31 |
exocrine system | 2.30e-14 | 31 |
endocrine gland | 1.10e-12 | 35 |
gut epithelium | 6.92e-11 | 54 |
small intestine | 7.89e-11 | 4 |
endocrine system | 8.60e-10 | 45 |
abdomen element | 4.25e-08 | 54 |
abdominal segment element | 4.25e-08 | 54 |
subdivision of digestive tract | 1.63e-07 | 118 |
gland | 2.23e-07 | 59 |
uterine epithelium | 2.40e-07 | 2 |
cervix epithelium | 2.40e-07 | 2 |
abdominal segment of trunk | 3.00e-07 | 60 |
abdomen | 3.00e-07 | 60 |
endo-epithelium | 5.92e-07 | 82 |
intestine | 8.84e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.42e-13 | 1 |
extraosseous chondrosarcoma | 1.42e-13 | 1 |
myxoid chondrosarcoma | 1.42e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 1.42e-13 | 1 |
signet ring cell adenocarcinoma | 2.12e-07 | 2 |