FFCP PHASE1:Hg19::chr15:58306192..58306225,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15472 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_uc002aew.2_5end | |||
|coexpression_cluster_id=C386 | |||
|description=CAGE_peak_7_at_ALDH1A2_5end | |||
|id=chr15:58306192..58306225,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.06e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.06e-09,25;CL:0000827,5.06e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.32e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.49e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.49e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002084!2.60e-09!1;UBERON:0002082!2.60e-09!1;UBERON:0004706!2.60e-09!1;UBERON:0002135!3.58e-09!1;UBERON:0002370!5.12e-09!4;UBERON:0005058!5.12e-09!4;UBERON:0009113!5.12e-09!4;UBERON:0003295!5.12e-09!4;UBERON:0005562!5.12e-09!4;UBERON:0000974!1.04e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.22e-98;2!UBERON:0005058;4.22e-98;2!UBERON:0009113;4.22e-98;2!UBERON:0004177;4.05e-40;5!UBERON:0005057;4.05e-40;5!UBERON:0000077;2.30e-08;27!UBERON:0002405;2.30e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.47e-50,4;UBERON:0005058,8.47e-50,4;UBERON:0009113,8.47e-50,4;UBERON:0003295,8.47e-50,4;UBERON:0005562,8.47e-50,4;UBERON:0003351,1.17e-33,6;UBERON:0004177,4.86e-29,7;UBERON:0005057,4.86e-29,7;UBERON:0000974,1.04e-20,10;UBERON:0003408,1.04e-20,10;UBERON:0001042,1.04e-20,10;UBERON:0009145,1.04e-20,10;UBERON:0006562,6.17e-19,11;UBERON:0009722,6.17e-19,11;UBERON:0007690,6.17e-19,11;UBERON:0008814,5.09e-12,18;UBERON:0001557,1.91e-11,19;UBERON:0004807,4.21e-08,28;UBERON:0000077,7.40e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782560276832555,36.1897639094427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.0089171700388,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,1.93766729508018,2.48298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p7@ALDH1A2 | |||
}} |
Revision as of 23:46, 11 January 2014
Short description: | p7@ALDH1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ALDH1A2_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | 9bp_to_uc002aew.2_5end |
EntrezGene: | ALDH1A2 |
HGNC: | 15472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.06e-09 | 25 |
pro-T cell | 5.06e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.47e-50 | 4 |
hemolymphoid system gland | 8.47e-50 | 4 |
thymic region | 8.47e-50 | 4 |
pharyngeal gland | 8.47e-50 | 4 |
thymus primordium | 8.47e-50 | 4 |
pharyngeal epithelium | 1.17e-33 | 6 |
hemopoietic organ | 4.86e-29 | 7 |
immune organ | 4.86e-29 | 7 |
neck | 1.04e-20 | 10 |
gland of gut | 1.04e-20 | 10 |
chordate pharynx | 1.04e-20 | 10 |
pharyngeal region of foregut | 1.04e-20 | 10 |
pharynx | 6.17e-19 | 11 |
entire pharyngeal arch endoderm | 6.17e-19 | 11 |
early pharyngeal endoderm | 6.17e-19 | 11 |
pharyngeal arch system | 5.09e-12 | 18 |
upper respiratory tract | 1.91e-11 | 19 |
respiratory system epithelium | 4.21e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 7.40e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.49e-07 | 8 |