FFCP PHASE1:Hg19::chr15:96828688..96828704,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3529 | |||
|description=CAGE_peak_at_chr15:96828688..96828704,- | |||
|id=chr15:96828688..96828704,- | |||
|ontology_enrichment_celltype=CL:0000055!1.29e-16!180;CL:0000188!1.63e-10!9;CL:0000680!2.36e-08!57;CL:0000056!2.36e-08!57;CL:0000355!2.36e-08!57;CL:0000057!2.54e-08!75;CL:0000187!1.14e-07!54;CL:0000183!3.90e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000708;4.24e-19;3!CL:0000134;1.18e-11;55!CL:0002582;3.53e-09;3!CL:0000048;4.04e-09;58!CL:0000034;4.22e-09;69!CL:0000723;1.34e-08;61!CL:0002601;5.57e-08;1!CL:0000228;1.68e-07;1!CL:0002574;1.68e-07;1!CL:0002372;1.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,3.53e-19,3;CL:0002582,5.35e-09,3;CL:0002601,5.58e-08,1;CL:0000228,1.30e-07,1;CL:0002372,1.30e-07,1;CL:0002574,2.63e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.81e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.01e-28;14!DOID:120;6.11e-14;27!DOID:193;6.72e-13;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.06e-28,14;DOID:120,6.13e-14,27;DOID:193,6.75e-13,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.40e-09!83;UBERON:0002329!1.40e-09!83;UBERON:0003077!1.40e-09!83;UBERON:0003059!1.40e-09!83;UBERON:0007282!1.40e-09!83;UBERON:0009618!1.40e-09!83;UBERON:0007285!1.40e-09!83;UBERON:0000992!2.26e-09!13;UBERON:0004290!6.11e-09!70;UBERON:0002118!6.04e-08!5;UBERON:0004532!6.04e-08!5;UBERON:0002200!1.67e-07!11;UBERON:0006876!1.67e-07!11;UBERON:0001134!2.43e-07!61;UBERON:0002036!2.43e-07!61;UBERON:0003082!2.43e-07!61;UBERON:0005156!4.95e-07!59;UBERON:0000990!4.95e-07!59;UBERON:0002385!6.87e-07!63;UBERON:0001015!6.87e-07!63;UBERON:0000383!6.87e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;4.62e-21;5!UBERON:0003210;4.24e-19;3!UBERON:0000992;2.34e-17;13!UBERON:0000991;1.55e-10;21!UBERON:0003134;1.09e-09;33!UBERON:0000474;2.16e-07;37!UBERON:0003100;2.44e-07;41!UBERON:0002119;2.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,4.88e-21,5;UBERON:0003210,3.53e-19,3;UBERON:0000992,2.56e-17,13;UBERON:0000991,1.63e-10,21;UBERON:0009196,1.63e-10,21;UBERON:0009117,1.63e-10,21;UBERON:0005564,1.63e-10,21;UBERON:0004176,5.21e-10,22;UBERON:0003134,5.69e-10,37;UBERON:0000474,5.69e-10,37;UBERON:0005156,4.29e-09,59;UBERON:0000990,4.29e-09,59;UBERON:0003100,6.97e-09,41;UBERON:0003133,2.04e-07,48;UBERON:0002119,3.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.908144565869588,0.576175924479999,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.919463387397059,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,0.772921620136887,0,0,0,0.504867548488229,0.184099797284599,0,0,0,1.01736355386293,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.411309970813294,2.40274446275134,0.285826432630578,1.45770409648969,1.30788020649984,1.10007428731425,0,0,0.845302752556,5.05282421511254,3.12022310734098,1.02882949704857,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0,0.921845842708516,1.04260337361699,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,1.3878872442239,0.532685175939381,1.23190734020714,1.03850885836724,0.929683027679674,0,0,0,0.574072240823034,2.36718518408732,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0.308097234229289,0.460511024178389,0.551346289938122,0.429680979473094,0.580066775656914,0.596586391912706,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,1.73986598415015,0,0,0,1.2655176988749,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.539617372749944,0,0.235624804691373,0,0,0,0,0,0,1.22849920267187,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,3.19284957663538,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0,0,0,0,0,1.43176155503017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,2.01514705484097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0,0,0,0,0,0,1.62899880526114,0,0.979762080328227,0,0,0.511164065356265,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.606596470166591,0.856396000634902,0,0,0,0.895528817321244,0,0.554805861502613,0.378806010550178,0,0,0,0.604923695052956,0.310874401165561,0.147855149989634,0.796483835818512,0.449803112163605,1.24210365501008,2.07353103920428,1.86089200190596,1.04349012362347,0.150257608997218,0.380805212168795,1.22061219961398,2.90957854724095,0.429642228169954,7.4245401580559,3.98095888698616,0.800055529326307,0,0.673498977531838,0,0,0,0.782982875895635,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,4.86175929883811,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.709992004383392,0.766920642832419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,1.90624166387043,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.611207220914332,0,0,0,0 | |||
|short_description=p@chr15:96828688..96828704,- | |||
}} |
Revision as of 01:26, 12 January 2014
Short description: | p@chr15:96828688..96828704, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:96828688..96828704, - |
Coexpression cluster: | C3529_mesenchymal_mesothelioma_Mesenchymal_thyroid_Prostate_leiomyoma_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 3.53e-19 | 3 |
visceral preadipocyte | 5.35e-09 | 3 |
uterine smooth muscle cell | 5.58e-08 | 1 |
multinucleate cell | 1.30e-07 | 1 |
myotube | 1.30e-07 | 1 |
stromal cell of pancreas | 2.63e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
right ovary | 4.88e-21 | 5 |
blood-cerebrospinal fluid barrier | 3.53e-19 | 3 |
female gonad | 2.56e-17 | 13 |
gonad | 1.63e-10 | 21 |
indifferent external genitalia | 1.63e-10 | 21 |
indifferent gonad | 1.63e-10 | 21 |
gonad primordium | 1.63e-10 | 21 |
external genitalia | 5.21e-10 | 22 |
female reproductive organ | 5.69e-10 | 37 |
female reproductive system | 5.69e-10 | 37 |
reproductive structure | 4.29e-09 | 59 |
reproductive system | 4.29e-09 | 59 |
female organism | 6.97e-09 | 41 |
reproductive organ | 2.04e-07 | 48 |
left ovary | 3.08e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.06e-28 | 14 |
female reproductive organ cancer | 6.13e-14 | 27 |
reproductive organ cancer | 6.75e-13 | 29 |