FFCP PHASE1:Hg19::chr16:2867406..2867433,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr16:2867406..2867433,+ | |||
|id=chr16:2867406..2867433,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.48e-09!112;CL:0000049!4.48e-09!112;CL:0002194!2.67e-07!63;CL:0000576!2.67e-07!63;CL:0000040!2.67e-07!63;CL:0000559!2.67e-07!63;CL:0000839!3.54e-07!70;CL:0000037!3.62e-07!172;CL:0000566!3.62e-07!172;CL:0000860!3.75e-07!45;CL:0002032!4.65e-07!165;CL:0000837!4.65e-07!165;CL:0002009!7.10e-07!65 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.76e-13;29 | |||
|ontology_enrichment_disease=DOID:1036!8.80e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.37e-17;8!DOID:8692;3.15e-12;31!DOID:3493;2.14e-09;2!DOID:1240;2.43e-09;39!DOID:2531;2.04e-07;51!DOID:0060083;2.04e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.05e-17,8;DOID:8692,2.90e-13,31;DOID:1240,4.02e-12,39;DOID:162,4.52e-11,235;DOID:14566,1.10e-10,239;DOID:2531,2.54e-10,51;DOID:0060083,2.54e-10,51;DOID:305,1.54e-09,106;DOID:3493,2.14e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.11e-14!9;UBERON:0001557!2.61e-08!19;UBERON:0008947!4.96e-07!38;UBERON:0003258!4.96e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.53e-38;9!UBERON:0001557;6.53e-38;9!UBERON:0000072;1.32e-12;37!UBERON:0000065;1.56e-11;44!UBERON:0001829;3.80e-09;2!UBERON:0001004;4.28e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.42e-38,9;UBERON:0001557,6.87e-21,19;UBERON:0008947,2.53e-13,38;UBERON:0003258,2.53e-13,38;UBERON:0000072,3.85e-12,47;UBERON:0001004,4.63e-12,74;UBERON:0001041,4.32e-11,87;UBERON:0000065,3.42e-10,54;UBERON:0001829,3.96e-09,2;UBERON:0004921,5.15e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0,0,0,0.587200878669695,0,0,0,0,0,0,1.01778767145695,1.13362783106643,0,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0.818718450173537,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37045676297569,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0.324547393654683,1.56716763569341,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4757596038649,16.6898843177321,11.3275184045237,10.4779274095774,12.4191283132672,14.9480490039991,12.9438055833758,14.716609884401,11.1576675514453,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0.179117045405697,0.290633938513962,1.15014803749563,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,3.13838403181876,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0.581051892299796,0,0,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.255225424989168,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0.288666338176536,0,2.17781969722645,0,0.86101074534246,0,0.886860307073351,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,2.2980644415884,0,0.973865820823666,0,0,0,10.0253790836027,0.338583555603207,0,0,2.55507742614196,0,0,0,0,0,0,0,1.6227340708559,2.33150377598474,0,0,0,0,0.445773537109913,1.42068073403207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04189247207618,0,0,0,0,0,0,0,0,0,0,0,0,3.15833924864053,2.15668787749514,1.84603745673427,2.27704479269022,3.81447789552909,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,3.98792323624311,2.97892760287949,4.39506085770115,1.19472429772959,0,0,0,1.46988596121566,0,0,0,7.64375017183773,7.6012889769633,9.27904664701264,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0.426905989478705,0,0,0,0,0,1.11827282008889,0.942776138467182,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,4.843458724211,0,0,0,0,0,0,0,0,0,0,0,0,1.38328142328561,3.0448149595224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38699248602383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,2.12345502025933,0,0,0,0,0,0,0,0,0,0,3.99211432786022,0,0,0,0,0,2.19303106742873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,3.01159151174194,0.236664001461131,0,0,0,0,0,0,7.16496705391274,7.80274719886524,0,0,0,0,0,0,0,0,0.659643100472575,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0.892769693028288,0,0,0,8.25712710128173,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0.305966489225945,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0.426909383510862,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:2867406..2867433,+ | |||
}} |
Revision as of 01:57, 12 January 2014
Short description: | p@chr16:2867406..2867433, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2867406..2867433, + |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 6.42e-38 | 9 |
upper respiratory tract | 6.87e-21 | 19 |
respiratory primordium | 2.53e-13 | 38 |
endoderm of foregut | 2.53e-13 | 38 |
segment of respiratory tract | 3.85e-12 | 47 |
respiratory system | 4.63e-12 | 74 |
foregut | 4.32e-11 | 87 |
respiratory tract | 3.42e-10 | 54 |
major salivary gland | 3.96e-09 | 2 |
subdivision of digestive tract | 5.15e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.05e-17 | 8 |
myeloid leukemia | 2.90e-13 | 31 |
leukemia | 4.02e-12 | 39 |
cancer | 4.52e-11 | 235 |
disease of cellular proliferation | 1.10e-10 | 239 |
hematologic cancer | 2.54e-10 | 51 |
immune system cancer | 2.54e-10 | 51 |
carcinoma | 1.54e-09 | 106 |
signet ring cell adenocarcinoma | 2.14e-09 | 2 |