FFCP PHASE1:Hg19::chr16:85936600..85936623,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3394 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5358 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=282bp_to_uc002fji.2_5end | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_4_at_IRF8_5end | |||
|id=chr16:85936600..85936623,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.94e-47!140;CL:0002087!2.52e-44!119;CL:0000037!2.51e-43!172;CL:0000566!2.51e-43!172;CL:0000988!4.77e-40!182;CL:0002031!2.36e-36!124;CL:0002032!1.52e-35!165;CL:0000837!1.52e-35!165;CL:0000945!3.02e-31!24;CL:0000826!3.02e-31!24;CL:0000542!3.32e-25!53;CL:0000051!3.32e-25!53;CL:0000838!1.39e-23!52;CL:0002009!5.43e-16!65;CL:0002057!7.72e-16!42;CL:0000766!1.80e-15!76;CL:0002194!3.56e-15!63;CL:0000576!3.56e-15!63;CL:0000040!3.56e-15!63;CL:0000559!3.56e-15!63;CL:0000860!1.91e-14!45;CL:0000557!4.24e-14!71;CL:0000236!7.48e-14!14;CL:0000763!3.84e-13!112;CL:0000049!3.84e-13!112;CL:0000134!4.10e-13!358;CL:0000839!4.75e-13!70;CL:0002320!1.47e-12!365;CL:0000219!1.29e-10!390;CL:0000048!2.02e-09!430;CL:0000784!2.71e-09!3;CL:0000034!2.97e-09!444;CL:0000723!4.48e-09!436;CL:0000767!4.17e-08!3;CL:0000842!8.37e-08!3;CL:0000623!2.34e-07!3;CL:0000825!2.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.52e-46;24!CL:0000784;7.78e-26;3!CL:0000236;1.26e-15;13!CL:0000542;7.76e-13;53!CL:0000946;1.91e-09;1!CL:0000786;1.91e-09;1!CL:0002087;1.70e-08;104!CL:0000451;2.03e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.72e-46,24;CL:0000826,6.72e-46,24;CL:0000784,7.48e-26,3;CL:0000542,3.78e-23,53;CL:0000051,3.78e-23,53;CL:0000738,3.17e-22,136;CL:0002087,1.93e-21,115;CL:0000236,1.66e-20,14;CL:0000838,4.19e-20,52;CL:0000037,2.38e-19,168;CL:0000988,3.47e-18,177;CL:0002031,4.97e-16,120;CL:0002032,1.80e-14,161;CL:0000837,1.80e-14,161;CL:0000946,1.84e-09,1;CL:0000786,1.84e-09,1;CL:0000980,1.84e-09,1;CL:0000451,2.00e-07,10;CL:0000134,3.19e-07,354;CL:0002320,5.24e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;7.76e-13;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.54e-11!10;DOID:2531!3.84e-08!51;DOID:0060083!3.84e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:630;3.67e-09;1!DOID:0050177;3.67e-09;1!DOID:12603;3.67e-09;1!DOID:0050427;3.67e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.35e-09,1;DOID:0050177,2.35e-09,1;DOID:0050427,2.35e-09,1;DOID:12603,4.87e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.20e-21!112;UBERON:0002390!1.31e-18!102;UBERON:0003061!1.31e-18!102;UBERON:0002405!2.03e-15!115;UBERON:0002371!5.75e-13!80;UBERON:0002384!8.36e-12!375;UBERON:0001474!1.31e-11!86;UBERON:0004765!6.01e-09!101;UBERON:0001434!6.01e-09!101;UBERON:0004177!7.91e-08!7;UBERON:0002106!1.31e-07!3;UBERON:0004854!1.31e-07!3;UBERON:0009034!1.31e-07!3;UBERON:0002095!1.31e-07!3;UBERON:0004782!1.31e-07!3;UBERON:0003281!1.31e-07!3;UBERON:0009664!1.31e-07!3;UBERON:0002296!1.31e-07!3;UBERON:0005602!1.31e-07!3;UBERON:0001179!1.31e-07!3;UBERON:0006293!1.31e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.67e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.25e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,1.06730766284929,1.8890587515283,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0.697204805222715,1.42169232487422,0.293600439334847,1.10799081706375,0.401088894940283,0,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0.822335776043652,0,1.7261543539329,2.81776777182011,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,1.27867425159808,0.659702600373432,0.797854630486527,0.852449501065388,0,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,2.13365111283254,2.40237592221607,0.574752439954483,0,0,5.12291672198504,5.87237189370939,3.05818582500183,0,3.36305137788922,0,0.786839080455332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43924685624423,11.4398982156026,11.1437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,1.11481905075431,0,0.213425530045242,0,0,0,0,0,0,0.456469358066384,0,0,0,0.321176150207399,0,0.425846237690326,6.18309620560377,0.307240764308458,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,3.07712013652674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7656157013387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.128915775947154,1.29923502702408,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0.342233301085281,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |||
|short_description=p4@IRF8 | |||
}} |
Revision as of 12:38, 20 January 2014
Short description: | p4@IRF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IRF8_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 282bp_to_uc002fji.2_5end |
EntrezGene: | IRF8 |
HGNC: | 5358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.72e-46 | 24 |
pro-B cell | 6.72e-46 | 24 |
plasmacytoid dendritic cell | 7.48e-26 | 3 |
lymphocyte | 3.78e-23 | 53 |
common lymphoid progenitor | 3.78e-23 | 53 |
leukocyte | 3.17e-22 | 136 |
nongranular leukocyte | 1.93e-21 | 115 |
B cell | 1.66e-20 | 14 |
lymphoid lineage restricted progenitor cell | 4.19e-20 | 52 |
hematopoietic stem cell | 2.38e-19 | 168 |
hematopoietic cell | 3.47e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 4.97e-16 | 120 |
hematopoietic oligopotent progenitor cell | 1.80e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-14 | 161 |
antibody secreting cell | 1.84e-09 | 1 |
plasma cell | 1.84e-09 | 1 |
plasmablast | 1.84e-09 | 1 |
dendritic cell | 2.00e-07 | 10 |
mesenchymal cell | 3.19e-07 | 354 |
connective tissue cell | 5.24e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.25e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.35e-09 | 1 |
monogenic disease | 2.35e-09 | 1 |
xeroderma pigmentosum | 2.35e-09 | 1 |
acute leukemia | 4.87e-09 | 1 |