FFCP PHASE1:Hg19::chr17:26800693..26800705,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10917 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETH5,F5GZ33,F5GWV6,B4DPL1,Q13183 | |||
|association_with_transcript=29bp_to_ENST00000444914,ENST00000541739,ENST00000545060,NM_001145975,NM_001145976,NM_003984,NR_027384,uc002hbh.2,uc002hbi.2,uc010wal.1,uc010wam.1,uc010wan.1,uc010wao.1_5end | |||
|coexpression_cluster_id=C3620 | |||
|description=CAGE_peak_2_at_SLC13A2_5end | |||
|id=chr17:26800693..26800705,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.87e-23;1!UBERON:0006298;5.13e-23;1!UBERON:0008801;5.13e-23;1!UBERON:0007297;1.96e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!4.26e-14!2;UBERON:0003127!9.83e-14!2;UBERON:0007023!2.47e-12!115;UBERON:0001044!1.80e-10!6;UBERON:0003293!1.80e-10!6;UBERON:0003294!1.80e-10!6;UBERON:0010047!1.80e-10!6;UBERON:0000167!1.80e-10!6;UBERON:0006947!1.09e-09!3;UBERON:0004054!1.09e-09!3;UBERON:0000059!1.49e-09!11;UBERON:0002771!6.05e-09!3;UBERON:0000998!5.22e-08!1;UBERON:0006868!5.22e-08!1;UBERON:0001736!6.37e-08!1;UBERON:0006298!6.37e-08!1;UBERON:0001831!7.26e-08!1;UBERON:0001567!7.26e-08!1;UBERON:0008801!7.26e-08!1;UBERON:0001000!8.84e-08!1;UBERON:0005352!8.84e-08!1;UBERON:0000160!9.77e-08!27;UBERON:0001871!1.60e-07!7;UBERON:0005904!1.80e-07!4;UBERON:0001052!3.60e-07!4;UBERON:0001155!5.82e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.72e-44;2!UBERON:0001044;1.94e-33;6!UBERON:0003293;1.94e-33;6!UBERON:0003294;1.94e-33;6!UBERON:0010047;1.94e-33;6!UBERON:0003408;1.94e-33;6!UBERON:0000167;1.94e-33;6!UBERON:0000998;1.87e-23;1!UBERON:0006868;1.87e-23;1!UBERON:0001831;5.13e-23;1!UBERON:0001736;5.13e-23;1!UBERON:0001567;5.13e-23;1!UBERON:0004921;1.08e-21;33!UBERON:0001041;8.66e-15;14!UBERON:0004089;3.24e-12;2!UBERON:0000160;9.24e-12;17!UBERON:0000161;4.44e-11;19!UBERON:0000166;4.44e-11;19!UBERON:0001155;8.57e-11;9!UBERON:0001555;4.05e-10;54!UBERON:0005409;2.41e-09;22!UBERON:0000059;5.31e-09;11!UBERON:0006947;1.00e-08;3!UBERON:0004054;1.00e-08;3!UBERON:0000165;1.02e-07;28!UBERON:0001007;4.69e-07;81!UBERON:0002365;6.81e-07;31!UBERON:0002330;6.81e-07;31!UBERON:0005904;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.72e-44,2;UBERON:0001044,2.05e-33,6;UBERON:0003293,2.05e-33,6;UBERON:0003294,2.05e-33,6;UBERON:0010047,2.05e-33,6;UBERON:0000167,2.05e-33,6;UBERON:0000998,2.10e-23,1;UBERON:0006868,2.10e-23,1;UBERON:0001736,4.10e-23,1;UBERON:0006298,4.10e-23,1;UBERON:0001831,6.40e-23,1;UBERON:0001567,6.40e-23,1;UBERON:0008801,6.40e-23,1;UBERON:0003408,2.18e-20,10;UBERON:0004089,3.62e-12,2;UBERON:0000160,8.91e-12,17;UBERON:0001155,8.37e-11,9;UBERON:0000166,1.19e-09,22;UBERON:0000059,5.20e-09,11;UBERON:0006947,1.04e-08,3;UBERON:0004054,1.04e-08,3;UBERON:0005409,2.40e-08,25;UBERON:0000165,1.82e-07,29;UBERON:0000930,1.82e-07,29;UBERON:0002365,5.08e-07,31;UBERON:0002330,5.08e-07,31;UBERON:0007023,5.84e-07,114;UBERON:0005904,7.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,4.95362361218699,2.4441205797345,0,0,0,0,0,0,0,0,0,0.789168805698781,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,6.88363774112444,0,0,4.65725755210022,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0.109940516745429,0,6.94567422971502,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0,0,0,0.717222053926764,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SLC13A2 | |||
}} |
Revision as of 14:23, 20 January 2014
Short description: | p2@SLC13A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC13A2_5end |
Coexpression cluster: | C3620_small_salivary_colon_seminal_submaxillary_duodenum_rectum |
Association with transcript: | 29bp_to_ENST00000444914, ENST00000541739, ENST00000545060, NM_001145975, NM_001145976, NM_003984, NR_027384, uc002hbh.2, uc002hbi.2, uc010wal.1, uc010wam.1, uc010wan.1, uc010wao.1_5end |
EntrezGene: | SLC13A2 |
HGNC: | 10917 |
UniProt: | E7ETH5F5GZ33F5GWV6B4DPL1Q13183 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.72e-44 | 2 |
saliva-secreting gland | 2.05e-33 | 6 |
gland of oral region | 2.05e-33 | 6 |
gland of foregut | 2.05e-33 | 6 |
oral gland | 2.05e-33 | 6 |
oral cavity | 2.05e-33 | 6 |
seminal vesicle | 2.10e-23 | 1 |
seminal fluid secreting gland | 2.10e-23 | 1 |
submandibular gland | 4.10e-23 | 1 |
submandibular gland primordium | 4.10e-23 | 1 |
parotid gland | 6.40e-23 | 1 |
cheek | 6.40e-23 | 1 |
parotid gland primordium | 6.40e-23 | 1 |
gland of gut | 2.18e-20 | 10 |
midface | 3.62e-12 | 2 |
intestine | 8.91e-12 | 17 |
colon | 8.37e-11 | 9 |
oral opening | 1.19e-09 | 22 |
large intestine | 5.20e-09 | 11 |
male genital duct | 1.04e-08 | 3 |
internal male genitalia | 1.04e-08 | 3 |
gastrointestinal system | 2.40e-08 | 25 |
mouth | 1.82e-07 | 29 |
stomodeum | 1.82e-07 | 29 |
exocrine gland | 5.08e-07 | 31 |
exocrine system | 5.08e-07 | 31 |
adult organism | 5.84e-07 | 114 |
duct of male reproductive system | 7.70e-07 | 4 |