FFCP PHASE1:Hg19::chr18:37550533..37550548,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_at_chr18:37550533..37550548,+ | |||
|id=chr18:37550533..37550548,+ | |||
|ontology_enrichment_celltype=CL:0002144!8.16e-18!3;CL:0002617!3.70e-12!2;CL:0002588!9.06e-12!2;CL:0000359!6.64e-10!32;CL:0000222!6.74e-10!119;CL:0002580!1.49e-08!3;CL:0002551!1.57e-08!6;CL:0000708!3.25e-08!3;CL:0000680!5.75e-08!57;CL:0000056!5.75e-08!57;CL:0000355!5.75e-08!57;CL:0002334!7.02e-08!12;CL:0002139!7.34e-08!24;CL:0002616!2.22e-07!1;CL:0002581!2.36e-07!1;CL:0000192!2.87e-07!42;CL:0000514!2.87e-07!42;CL:0002557!3.17e-07!1;CL:0000115!5.04e-07!35;CL:0000055!5.87e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002616;2.78e-26;1!CL:0002581;3.58e-26;1!CL:0002557;1.26e-25;1!CL:0002262;1.21e-13;2!CL:1000398;1.21e-13;2!CL:0002615;1.54e-09;3!CL:0000515;1.54e-09;3!CL:0000136;1.26e-08;13!CL:0000056;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,2.78e-26,1;CL:0002581,3.58e-26,1;CL:0002557,1.26e-25,1;CL:0002262,1.21e-13,2;CL:1000398,1.21e-13,2;CL:0002615,1.41e-09,3;CL:0000136,1.31e-07,15;CL:0000515,1.92e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.80e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001915!8.16e-18!3;UBERON:0001982!8.16e-18!3;UBERON:0000055!2.75e-17!69;UBERON:0001981!2.15e-15!60;UBERON:0007500!2.15e-15!60;UBERON:0004537!2.15e-15!60;UBERON:0006965!2.15e-15!60;UBERON:0002049!1.14e-14!79;UBERON:0007798!1.14e-14!79;UBERON:0005406!4.66e-13!2;UBERON:0004872!8.76e-12!84;UBERON:0004535!5.71e-11!110;UBERON:0004290!1.26e-10!70;UBERON:0001009!1.39e-10!113;UBERON:0000310!3.30e-09!10;UBERON:0000486!1.06e-08!82;UBERON:0000914!1.44e-08!83;UBERON:0002329!1.44e-08!83;UBERON:0003077!1.44e-08!83;UBERON:0003059!1.44e-08!83;UBERON:0007282!1.44e-08!83;UBERON:0009618!1.44e-08!83;UBERON:0007285!1.44e-08!83;UBERON:0001443!2.23e-08!11;UBERON:0003210!3.25e-08!3;UBERON:0003914!1.63e-07!118;UBERON:0001637!2.27e-07!42;UBERON:0003509!2.27e-07!42;UBERON:0004572!2.27e-07!42;UBERON:0001134!2.48e-07!61;UBERON:0002036!2.48e-07!61;UBERON:0003082!2.48e-07!61;UBERON:0007195!2.50e-07!1;UBERON:0002385!4.79e-07!63;UBERON:0001015!4.79e-07!63;UBERON:0000383!4.79e-07!63;UBERON:0000490!4.92e-07!138;UBERON:0002100!6.73e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.46e-50;2!UBERON:0007195;4.61e-26;1!UBERON:0001281;1.21e-13;2!UBERON:0003497;1.21e-13;2!UBERON:0003909;1.21e-13;2!UBERON:0003835;1.21e-13;2!UBERON:0000078;1.55e-13;2!UBERON:0002012;1.55e-13;2!UBERON:0008886;1.55e-13;2!UBERON:0001280;1.54e-09;3!UBERON:0004647;1.54e-09;3!UBERON:0001013;4.04e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.46e-50,2;UBERON:0007195,4.61e-26,1;UBERON:0001281,1.21e-13,2;UBERON:0003497,1.21e-13,2;UBERON:0003909,1.21e-13,2;UBERON:0003835,1.21e-13,2;UBERON:0000078,1.55e-13,2;UBERON:0007497,1.55e-13,2;UBERON:0003643,1.55e-13,2;UBERON:0003504,1.55e-13,2;UBERON:0003469,1.55e-13,2;UBERON:0003496,1.55e-13,2;UBERON:0002012,1.55e-13,2;UBERON:0008886,1.55e-13,2;UBERON:0007303,1.55e-13,2;UBERON:0002061,1.55e-13,2;UBERON:0005432,1.55e-13,2;UBERON:0004363,1.55e-13,2;UBERON:0001280,1.54e-09,3;UBERON:0004647,1.54e-09,3;UBERON:0005171,1.54e-09,3;UBERON:0004145,1.81e-09,3;UBERON:0001013,4.04e-08,14 | |||
|phase1_expression=0.363356758541113,0.214100523890983,2.81908808191942,0,0,9.59572376510406,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92834711372036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46128221334885,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0,0.640695746278505,0,0,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0015270564734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:37550533..37550548,+ | |||
}} |
Revision as of 19:08, 20 January 2014
Short description: | p@chr18:37550533..37550548, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:37550533..37550548, + |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 2.78e-26 | 1 |
perirenal preadipocyte | 3.58e-26 | 1 |
fibroblast of pulmonary artery | 1.26e-25 | 1 |
endothelial cell of sinusoid | 1.21e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.21e-13 | 2 |
adipocyte of omentum tissue | 1.41e-09 | 3 |
fat cell | 1.31e-07 | 15 |
skeletal muscle myoblast | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.46e-50 | 2 |
stroma of bone marrow | 4.61e-26 | 1 |
hepatic sinusoid | 1.21e-13 | 2 |
abdomen blood vessel | 1.21e-13 | 2 |
sinusoid | 1.21e-13 | 2 |
abdominal segment blood vessel | 1.21e-13 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.55e-13 | 2 |
developing epithelial placode | 1.55e-13 | 2 |
respiratory system arterial blood vessel | 1.55e-13 | 2 |
respiratory system blood vessel | 1.55e-13 | 2 |
respiratory system artery | 1.55e-13 | 2 |
head blood vessel | 1.55e-13 | 2 |
pulmonary artery | 1.55e-13 | 2 |
pulmonary vascular system | 1.55e-13 | 2 |
pharyngeal vasculature | 1.55e-13 | 2 |
truncus arteriosus | 1.55e-13 | 2 |
aortic sac | 1.55e-13 | 2 |
pharyngeal arch artery | 1.55e-13 | 2 |
liver parenchyma | 1.54e-09 | 3 |
liver lobule | 1.54e-09 | 3 |
hepatic duct | 1.54e-09 | 3 |
outflow tract | 1.81e-09 | 3 |
adipose tissue | 4.04e-08 | 14 |