FFCP PHASE1:Hg19::chr19:16187125..16187149,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12013 | |||
|TSSclassifier=strong | |||
|UniProt=P67936 | |||
|association_with_transcript=0bp_to_ENST00000300933,NM_003290,uc002ndj.2_5end | |||
|description=CAGE_peak_3_at_TPM4_5end | |||
|id=chr19:16187125..16187149,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.89e-07!246;CL:0000066!4.20e-07!254;CL:0002321!4.55e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.74e-07,250;CL:0000066,6.90e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!7.77e-07!173;UBERON:0006601!7.77e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.23e-07,171;UBERON:0000924,6.23e-07,171;UBERON:0006601,6.23e-07,171 | |||
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| |||
|short_description=p3@TPM4 | |||
}} |
Revision as of 21:55, 20 January 2014
Short description: | p3@TPM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000300933, NM_003290, uc002ndj.2_5end |
EntrezGene: | TPM4 |
HGNC: | 12013 |
UniProt: | P67936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.74e-07 | 250 |
epithelial cell | 6.90e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.23e-07 | 171 |
ectoderm | 6.23e-07 | 171 |
presumptive ectoderm | 6.23e-07 | 171 |