FFCP PHASE1:Hg19::chr19:39892249..39892258,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1429 | |||
|description=CAGE_peak_at_chr19:39892249..39892258,- | |||
|id=chr19:39892249..39892258,- | |||
|ontology_enrichment_celltype=CL:0000738!5.07e-59!140;CL:0000037!1.76e-45!172;CL:0000566!1.76e-45!172;CL:0002057!1.76e-42!42;CL:0000988!3.21e-42!182;CL:0002031!1.63e-41!124;CL:0002087!8.70e-40!119;CL:0000860!3.84e-39!45;CL:0002032!4.77e-38!165;CL:0000837!4.77e-38!165;CL:0000766!1.06e-36!76;CL:0000557!1.07e-34!71;CL:0002009!3.56e-31!65;CL:0000839!1.65e-30!70;CL:0000763!1.73e-28!112;CL:0000049!1.73e-28!112;CL:0002194!1.31e-27!63;CL:0000576!1.31e-27!63;CL:0000040!1.31e-27!63;CL:0000559!1.31e-27!63;CL:0002393!1.22e-25!9;CL:0002397!1.22e-25!9;CL:0000624!4.77e-17!6;CL:0000134!3.22e-16!358;CL:0002320!1.23e-15!365;CL:0000219!1.40e-13!390;CL:0000451!2.61e-12!10;CL:0000048!3.97e-11!430;CL:0000034!5.06e-11!444;CL:0000723!8.83e-11!436;CL:0000623!2.14e-10!3;CL:0000825!2.14e-10!3;CL:0000784!2.34e-10!3;CL:0000842!3.58e-10!3;CL:0000767!6.12e-10!3;CL:0000875!1.52e-09!3;CL:0002396!1.52e-09!3;CL:0000898!2.78e-09!3;CL:0000791!3.00e-09!18;CL:0000789!3.00e-09!18;CL:0002420!3.00e-09!18;CL:0002419!3.00e-09!18;CL:0000790!3.00e-09!18;CL:0000453!4.09e-09!5;CL:0000838!4.72e-09!52;CL:0000542!8.14e-09!53;CL:0000051!8.14e-09!53;CL:0000084!7.83e-08!25;CL:0000827!7.83e-08!25;CL:0000990!9.96e-08!8;CL:0000224!1.04e-07!4;CL:0001014!5.62e-07!2;CL:0001016!5.62e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.27e-29;3!CL:0000623;2.27e-29;3!CL:0000226;1.32e-13;3!CL:0000767;1.32e-13;3!CL:0000842;1.32e-13;3!CL:0000451;1.97e-08;10!CL:0002393;2.12e-07;6!CL:0002397;2.12e-07;6!CL:0002087;2.39e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.48e-29,3;CL:0000825,1.48e-29,3;CL:0000784,1.98e-29,3;CL:0000738,5.48e-25,136;CL:0000037,1.00e-19,168;CL:0000988,1.38e-18,177;CL:0002087,2.17e-18,115;CL:0000767,5.37e-14,3;CL:0000226,8.44e-14,3;CL:0000842,8.44e-14,3;CL:0002031,4.43e-13,120;CL:0002032,1.80e-12,161;CL:0000837,1.80e-12,161;CL:0002393,3.06e-10,9;CL:0002397,3.06e-10,9;CL:0000766,2.60e-09,72;CL:0000451,1.90e-08,10;CL:0000838,2.90e-08,52;CL:0000542,4.29e-08,53;CL:0000051,4.29e-08,53;CL:0000134,7.98e-08,354;CL:0000860,1.12e-07,42;CL:0002057,1.12e-07,42;CL:0002320,1.30e-07,361;CL:0002194,5.29e-07,59;CL:0000576,5.29e-07,59;CL:0000040,5.29e-07,59;CL:0000559,5.29e-07,59;CL:0000219,7.28e-07,386;CL:0002009,9.39e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.88e-30!80;UBERON:0002390!9.26e-29!102;UBERON:0003061!9.26e-29!102;UBERON:0001474!3.77e-27!86;UBERON:0002193!2.48e-25!112;UBERON:0004765!7.58e-22!101;UBERON:0001434!7.58e-22!101;UBERON:0002405!6.01e-21!115;UBERON:0002384!1.22e-15!375;UBERON:0003081!3.94e-10!216;UBERON:0002204!5.80e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.53e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,1.96682138424452,0.383829398097213,1.70297735647684,0,0,0,0,0,0,3.32397245119126,1.60435557976113,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,1.12361742222542,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,0,0,0.502497330513487,0,1.08594422352558,0,0,0.316462387440884,0.633765858935825,0.850417199860174,0.628975936525128,1.01095768031846,0.450530678524519,0.16072558669708,1.42506371870624,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,0,1.14681968437569,0,0.560508562981536,0,0.590129310341499,0.393010762749165,1.43921049299656,0,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0.766440987203842,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43094374583205,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.94064817373566,2.31017465303547,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:39892249..39892258,- | |||
}} |
Revision as of 23:12, 20 January 2014
Short description: | p@chr19:39892249..39892258, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39892249..39892258, - |
Coexpression cluster: | C1429_CD14_Basophils_Natural_immature_Peripheral_CD14CD16_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.48e-29 | 3 |
pro-NK cell | 1.48e-29 | 3 |
plasmacytoid dendritic cell | 1.98e-29 | 3 |
leukocyte | 5.48e-25 | 136 |
hematopoietic stem cell | 1.00e-19 | 168 |
hematopoietic cell | 1.38e-18 | 177 |
nongranular leukocyte | 2.17e-18 | 115 |
basophil | 5.37e-14 | 3 |
single nucleate cell | 8.44e-14 | 3 |
mononuclear cell | 8.44e-14 | 3 |
hematopoietic lineage restricted progenitor cell | 4.43e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.80e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-12 | 161 |
intermediate monocyte | 3.06e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.06e-10 | 9 |
myeloid leukocyte | 2.60e-09 | 72 |
dendritic cell | 1.90e-08 | 10 |
lymphoid lineage restricted progenitor cell | 2.90e-08 | 52 |
lymphocyte | 4.29e-08 | 53 |
common lymphoid progenitor | 4.29e-08 | 53 |
mesenchymal cell | 7.98e-08 | 354 |
classical monocyte | 1.12e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-07 | 42 |
connective tissue cell | 1.30e-07 | 361 |
monopoietic cell | 5.29e-07 | 59 |
monocyte | 5.29e-07 | 59 |
monoblast | 5.29e-07 | 59 |
promonocyte | 5.29e-07 | 59 |
motile cell | 7.28e-07 | 386 |
macrophage dendritic cell progenitor | 9.39e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.53e-07 | 371 |