FFCP PHASE1:Hg19::chr19:45409274..45409280,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=613 | |||
|TSSclassifier=weak | |||
|UniProt=E7ERP7 | |||
|association_with_transcript=-336bp_to_ENST00000425718_5end | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_6_at_APOE_5end | |||
|id=chr19:45409274..45409280,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.57e-07!12;CL:0000417!1.57e-07!12;CL:0000668!1.57e-07!12;CL:0000414!1.57e-07!12;CL:0000412!1.57e-07!12;CL:0000182!1.57e-07!12;CL:0000136!2.30e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002575;2.77e-18;2!CL:0000235;2.45e-13;6!CL:0002521;7.19e-13;3!CL:0000136;4.92e-11;13!CL:0002553;7.54e-10;1!CL:0000669;1.31e-09;4!CL:0000182;3.07e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.90e-18,2;CL:0000235,3.59e-13,6;CL:0002521,6.58e-13,3;CL:0002553,4.85e-10,1;CL:0000136,1.18e-09,15;CL:0000669,1.34e-09,4;CL:0000182,3.17e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-17!115;UBERON:0002107!3.20e-08!19;UBERON:0006925!3.20e-08!19;UBERON:0008836!3.20e-08!19;UBERON:0009854!1.53e-07!23;UBERON:0009856!1.78e-07!26;UBERON:0005057!4.31e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;7.19e-13;3!UBERON:0002107;1.76e-11;19!UBERON:0006925;1.76e-11;19!UBERON:0002423;1.10e-08;25!UBERON:0002072;4.53e-08;5!UBERON:0002365;5.65e-07;31!UBERON:0002330;5.65e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,6.58e-13,3;UBERON:0002107,1.69e-11,19;UBERON:0006925,1.69e-11,19;UBERON:0008836,1.69e-11,19;UBERON:0008835,6.57e-10,22;UBERON:0003894,6.57e-10,22;UBERON:0009854,1.80e-09,23;UBERON:0007499,1.07e-08,25;UBERON:0009497,1.07e-08,25;UBERON:0000015,1.07e-08,25;UBERON:0002423,1.07e-08,25;UBERON:0006235,1.07e-08,25;UBERON:0004161,1.07e-08,25;UBERON:0009856,2.34e-08,26;UBERON:0002072,4.30e-08,5;UBERON:0002365,5.62e-07,31;UBERON:0002330,5.62e-07,31 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.845726424575827,0,0.446961094427288,0,0,2.52687949370732,5.48489819219661,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0,0.163461903113459,0.756787138224657,1.15235184896,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,3.9313088667105,2.36315962672562,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,1.18904929830983,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0359512096318,0,0,0,0,0,0,0.285955987316295,5.42621605391443,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0.114536596165916,1.20116498503375,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.399358000997982,0.429226048136571,0,0,0,0,0.393915911536118,0.412079291905832,0.202210631562555,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,2.63794020620548,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,2.62298104567844,0,0.886068179966986,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,1.60114149657094,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0.514464028312255,0.0679697329768317,0.197318320688547,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0.20686599172379,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p6@APOE | |||
}} |
Revision as of 23:49, 20 January 2014
Short description: | p6@APOE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_APOE_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | -336bp_to_ENST00000425718_5end |
EntrezGene: | APOE |
HGNC: | 613 |
UniProt: | E7ERP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.90e-18 | 2 |
macrophage | 3.59e-13 | 6 |
subcutaneous fat cell | 6.58e-13 | 3 |
lung fibroblast | 4.85e-10 | 1 |
fat cell | 1.18e-09 | 15 |
pericyte cell | 1.34e-09 | 4 |
hepatocyte | 3.17e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 6.58e-13 | 3 |
liver | 1.69e-11 | 19 |
digestive gland | 1.69e-11 | 19 |
liver bud | 1.69e-11 | 19 |
hepatic diverticulum | 6.57e-10 | 22 |
liver primordium | 6.57e-10 | 22 |
digestive tract diverticulum | 1.80e-09 | 23 |
epithelial sac | 1.07e-08 | 25 |
epithelium of foregut-midgut junction | 1.07e-08 | 25 |
anatomical boundary | 1.07e-08 | 25 |
hepatobiliary system | 1.07e-08 | 25 |
foregut-midgut junction | 1.07e-08 | 25 |
septum transversum | 1.07e-08 | 25 |
sac | 2.34e-08 | 26 |
hypodermis | 4.30e-08 | 5 |
exocrine gland | 5.62e-07 | 31 |
exocrine system | 5.62e-07 | 31 |