FFCP PHASE1:Hg19::chr19:6686274..6686289,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=97bp_to_ENST00000463520_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_10_at_C3_5end | |||
|id=chr19:6686274..6686289,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.34e-21;12!CL:0000214;7.98e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.87e-22,12;CL:0000214,9.52e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.36e-17;11!UBERON:0009497;1.35e-14;13!UBERON:0003104;5.05e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.73e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-15!115;UBERON:0000477!5.57e-11!286;UBERON:0000025!9.03e-11!194;UBERON:0004111!6.93e-10!241;UBERON:0000483!1.85e-09!309;UBERON:0000119!3.98e-09!312;UBERON:0000481!1.67e-07!347;UBERON:0000468!3.54e-07!659;UBERON:0000467!3.69e-07!625;UBERON:0000923!4.16e-07!604;UBERON:0005291!4.16e-07!604;UBERON:0006598!4.16e-07!604;UBERON:0002532!4.16e-07!604;UBERON:0000480!4.40e-07!626;UBERON:0002050!4.95e-07!605;UBERON:0005423!4.95e-07!605;UBERON:0000922!8.40e-07!612;UBERON:0001049!8.88e-07!57;UBERON:0005068!8.88e-07!57;UBERON:0006241!8.88e-07!57;UBERON:0007135!8.88e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.37e-22;19!UBERON:0006925;4.37e-22;19!UBERON:0002423;2.09e-16;25!UBERON:0002365;3.30e-15;31!UBERON:0002330;3.30e-15;31!UBERON:0002368;5.85e-11;33!UBERON:0000949;2.19e-08;43!UBERON:0006915;7.98e-08;3!UBERON:0007616;7.98e-08;3!UBERON:0002217;7.98e-08;3!UBERON:0002018;7.98e-08;3!UBERON:0005172;2.54e-07;52!UBERON:0005173;2.54e-07;52!UBERON:0002417;9.29e-07;58!UBERON:0000916;9.29e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.43e-22,19;UBERON:0006925,3.43e-22,19;UBERON:0008836,3.43e-22,19;UBERON:0008835,5.99e-19,22;UBERON:0003894,5.99e-19,22;UBERON:0009854,4.68e-18,23;UBERON:0007499,1.75e-16,25;UBERON:0009497,1.75e-16,25;UBERON:0000015,1.75e-16,25;UBERON:0002423,1.75e-16,25;UBERON:0006235,1.75e-16,25;UBERON:0004161,1.75e-16,25;UBERON:0002365,6.27e-16,31;UBERON:0002330,6.27e-16,31;UBERON:0009856,8.66e-16,26;UBERON:0002368,2.54e-11,35;UBERON:0000949,2.07e-10,45;UBERON:0005172,3.88e-10,54;UBERON:0005173,3.88e-10,54;UBERON:0002417,6.50e-09,60;UBERON:0000916,6.50e-09,60;UBERON:0003914,2.49e-08,117;UBERON:0006915,9.52e-08,3;UBERON:0007616,9.52e-08,3;UBERON:0002217,9.52e-08,3;UBERON:0002018,9.52e-08,3;UBERON:0002530,1.71e-07,59;UBERON:0003929,8.57e-07,54;UBERON:0005256,8.76e-07,122 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,1.34465029290355,1.80808358407193,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,2.0078563452417,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0.330881918197182,0.435758888184812,0,0,0.196221465125346,0,0,0,0,0,86.193423678845,59.9524602173352,8.86184860022106,0,0.368965315629341,0,0,0,0,0,0.325808305310325,0,0,0,0,0.577465791044295,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,3.59902768255405,2.43247561282381,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,1.55776328755086,0.116210378459959,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,1.30012049207304,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,1.56989728039846,0,0,0,0,0,0,0.48763373908959,1.21856744815642,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,1.05553817648832,1.64647446479951,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.703347082052564,0.445234820091624,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,1.36730467016401,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,1.14262965711403,0,0,0,0.176915129006678,0,0,0,0,0.606610196826093,1.60515529459758,0,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0.483781656445426,0.219267951258557,0.574808199372465,0.193978032976839,0,0,0,0.19871461170299,0.0633107959558787,0,0.240476460754601,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.558564802544508,0,0,0,1.28767814440971,0.223171457441873,0,0,0,1.89079637537337,2.47247575143499,2.35912403489647,0,0,0,0.272406812223151,0,0,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0.709251365692784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.23279072171919,9.27548222385549,0.129282956361551,0.39669780522807,0,0,0.961086713109252,0.471612915298998,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.310482014706917,0.138348634936231,0,0,0,0.705797459094515,0,0,0,0.233713309847224,0,0,0,0,0.915360273587694,0.151230923763239,0.15543720058278,0.443565449968902,0.318593534327405,0.899606224327209,0,0,0,0.521745061811734,1.6528336989694,2.66563648518157,0.813741466409323,0.181848659202559,0.751873899297419,0,0.398095888698616,0,0,0,0,0.385239660814607,0.857766365499703,0.521988583930423,0,0,0.244736704506468,0,0.926404341482917,0.877136198314828,0,0.578742114812744,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.752103283492572,0.40341013740704,1.56302802246618,0,0.327543835020193,0,0.135075169236789,0,0.413373593002368,0,0,0,0,0,1.91643641459393,0,0,0,0,0,0,0.685952037749674,0.135939465953663,0,0,0,0.470958557103084,0,0,0,1.07963795609311,1.9110067515482,0.142953088353313,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.980593287015622,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0.357107877211315,0,0,0,0,0.573358332605805,0,0,0,0,2.23197010900051,0,0,0,0,0,0,0,0,0.250707539292375,0.303114792872958,0,0,0.724030971033267,0,0,0,0.186224142887574,0,0.190941474834495,0.202117188958219,0,0,0.26940821205835,0.717222053926764,0,0.0814032686109745,0.213454691755431,0,0,0,0.122241444182866,0,0.66575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| |||
|short_description=p10@C3 | |||
}} |
Revision as of 20:55, 20 January 2014
Short description: | p10@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 97bp_to_ENST00000463520_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.87e-22 | 12 |
synovial cell | 9.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.43e-22 | 19 |
digestive gland | 3.43e-22 | 19 |
liver bud | 3.43e-22 | 19 |
hepatic diverticulum | 5.99e-19 | 22 |
liver primordium | 5.99e-19 | 22 |
digestive tract diverticulum | 4.68e-18 | 23 |
epithelial sac | 1.75e-16 | 25 |
epithelium of foregut-midgut junction | 1.75e-16 | 25 |
anatomical boundary | 1.75e-16 | 25 |
hepatobiliary system | 1.75e-16 | 25 |
foregut-midgut junction | 1.75e-16 | 25 |
septum transversum | 1.75e-16 | 25 |
exocrine gland | 6.27e-16 | 31 |
exocrine system | 6.27e-16 | 31 |
sac | 8.66e-16 | 26 |
endocrine gland | 2.54e-11 | 35 |
endocrine system | 2.07e-10 | 45 |
abdomen element | 3.88e-10 | 54 |
abdominal segment element | 3.88e-10 | 54 |
abdominal segment of trunk | 6.50e-09 | 60 |
abdomen | 6.50e-09 | 60 |
epithelial tube | 2.49e-08 | 117 |
stratified squamous epithelium | 9.52e-08 | 3 |
layer of synovial tissue | 9.52e-08 | 3 |
synovial joint | 9.52e-08 | 3 |
synovial membrane of synovial joint | 9.52e-08 | 3 |
gland | 1.71e-07 | 59 |
gut epithelium | 8.57e-07 | 54 |
trunk mesenchyme | 8.76e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.73e-07 | 39 |