FFCP PHASE1:Hg19::chr1:156720278..156720286,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9343 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-115bp_to_ENST00000491853_5end | |||
|description=CAGE_peak_15_at_PRCC_5end | |||
|id=chr1:156720278..156720286,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-16!254;CL:0002076!2.37e-16!43;CL:0002368!5.56e-14!13;CL:0000223!1.40e-11!59;CL:0002159!2.88e-10!13;CL:0002621!2.55e-07!3;CL:0002251!5.87e-07!21;CL:0002202!9.14e-07!9;CL:0002632!9.14e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002328;5.61e-30;3!CL:0002368;1.97e-27;13!CL:0002202;1.35e-22;9!CL:0002632;1.35e-22;9!CL:0001014;1.48e-12;2!CL:0001016;1.48e-12;2!CL:0000307;9.66e-09;3!CL:0002327;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,5.61e-30,3;CL:0002368,2.11e-27,13;CL:0002202,1.46e-22,9;CL:0002632,1.46e-22,9;CL:0001014,1.48e-12,2;CL:0001016,1.48e-12,2;CL:0002076,8.67e-09,42;CL:0000068,1.04e-08,3;CL:0000069,1.04e-08,3;CL:0000307,1.04e-08,3;CL:0000377,1.04e-08,3;CL:0002327,8.14e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;9.66e-09;3 | |||
|ontology_enrichment_disease=DOID:305!5.00e-07!106;DOID:1749!7.06e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.27e-07;4!DOID:1612;7.27e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.87e-07,4;DOID:1612,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.06e-11!169;UBERON:0000925!5.06e-11!169;UBERON:0006595!5.06e-11!169;UBERON:0001004!1.98e-09!72;UBERON:0000065!2.72e-08!53;UBERON:0001949!2.55e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.61e-30;3!UBERON:0002031;5.61e-30;3!UBERON:0002185;1.93e-18;5!UBERON:0007196;7.34e-14;15!UBERON:0001558;7.34e-14;15!UBERON:0000485;1.80e-13;7!UBERON:0000065;4.85e-08;44!UBERON:0005178;6.69e-07;34!UBERON:0002224;6.69e-07;34!UBERON:0001911;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.61e-30,3;UBERON:0002031,5.61e-30,3;UBERON:0002185,1.93e-18,5;UBERON:0007196,7.68e-14,15;UBERON:0001558,7.68e-14,15;UBERON:0000485,1.07e-10,9;UBERON:0000915,3.62e-07,52;UBERON:0000065,6.62e-07,54;UBERON:0001911,8.14e-07,4;UBERON:0005333,8.14e-07,4;UBERON:0008425,8.14e-07,4;UBERON:0005311,8.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.555530670951178,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,2.57545848628462,0,0,0,0,0.335964256397719,0.850650583454319,0.895585227028483,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,2.29702882490251,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,2.01090682660736,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0.2249738915515,3.86900977278975,0,0.335434687599266,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.05868461514708,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@PRCC | |||
}} |
Revision as of 21:30, 10 January 2014
Short description: | p15@PRCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PRCC_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000491853_5end |
EntrezGene: | PRCC |
HGNC: | 9343 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 5.61e-30 | 3 |
respiratory epithelial cell | 2.11e-27 | 13 |
epithelial cell of tracheobronchial tree | 1.46e-22 | 9 |
epithelial cell of lower respiratory tract | 1.46e-22 | 9 |
CD1a-positive Langerhans cell | 1.48e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.48e-12 | 2 |
endo-epithelial cell | 8.67e-09 | 42 |
duct epithelial cell | 1.04e-08 | 3 |
branched duct epithelial cell | 1.04e-08 | 3 |
tracheal epithelial cell | 1.04e-08 | 3 |
tracheoblast | 1.04e-08 | 3 |
mammary gland epithelial cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.61e-30 | 3 |
epithelium of bronchus | 5.61e-30 | 3 |
bronchus | 1.93e-18 | 5 |
tracheobronchial tree | 7.68e-14 | 15 |
lower respiratory tract | 7.68e-14 | 15 |
simple columnar epithelium | 1.07e-10 | 9 |
thoracic segment of trunk | 3.62e-07 | 52 |
respiratory tract | 6.62e-07 | 54 |
mammary gland | 8.14e-07 | 4 |
mammary bud | 8.14e-07 | 4 |
mammary ridge | 8.14e-07 | 4 |
mammary placode | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.87e-07 | 4 |
breast cancer | 6.87e-07 | 4 |