FFCP PHASE1:Hg19::chr1:55464600..55464608,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16512 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WZ55 | |||
|association_with_transcript=0bp_to_ENST00000371265_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_BSND_5end | |||
|id=chr1:55464600..55464608,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.34e-66;1!UBERON:0003918;2.22e-27;10!UBERON:0007687;2.22e-27;10!UBERON:0003104;6.09e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001831!3.61e-34!1;UBERON:0001567!3.61e-34!1;UBERON:0008801!3.61e-34!1;UBERON:0001829!7.67e-18!2;UBERON:0004089!7.67e-18!2;UBERON:0001044!8.02e-07!6;UBERON:0003293!8.02e-07!6;UBERON:0003294!8.02e-07!6;UBERON:0010047!8.02e-07!6;UBERON:0000167!8.02e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;3.34e-66;1!UBERON:0001567;3.34e-66;1!UBERON:0001829;5.96e-34;2!UBERON:0004089;5.96e-34;2!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6!UBERON:0002113;3.86e-12;24!UBERON:0011143;3.86e-12;24!UBERON:0000489;3.03e-10;29!UBERON:0006554;6.09e-10;30!UBERON:0001008;6.09e-10;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,4.66e-66,1;UBERON:0001567,4.66e-66,1;UBERON:0008801,4.66e-66,1;UBERON:0001829,7.05e-34,2;UBERON:0004089,7.05e-34,2;UBERON:0001044,2.74e-12,6;UBERON:0003293,2.74e-12,6;UBERON:0003294,2.74e-12,6;UBERON:0010047,2.74e-12,6;UBERON:0000167,2.74e-12,6;UBERON:0002113,2.63e-11,26;UBERON:0003918,2.63e-11,26;UBERON:0011143,2.63e-11,26;UBERON:0005095,2.63e-11,26;UBERON:0007687,2.63e-11,26;UBERON:0000489,1.15e-09,31;UBERON:0003408,6.56e-08,10;UBERON:0006554,9.72e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83162234014067,1.94081976099493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BSND | |||
}} |
Revision as of 18:39, 10 January 2014
Short description: | p1@BSND |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BSND_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000371265_5end |
EntrezGene: | BSND |
HGNC: | 16512 |
UniProt: | Q8WZ55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 4.66e-66 | 1 |
cheek | 4.66e-66 | 1 |
parotid gland primordium | 4.66e-66 | 1 |
major salivary gland | 7.05e-34 | 2 |
midface | 7.05e-34 | 2 |
saliva-secreting gland | 2.74e-12 | 6 |
gland of oral region | 2.74e-12 | 6 |
gland of foregut | 2.74e-12 | 6 |
oral gland | 2.74e-12 | 6 |
oral cavity | 2.74e-12 | 6 |
kidney | 2.63e-11 | 26 |
kidney mesenchyme | 2.63e-11 | 26 |
upper urinary tract | 2.63e-11 | 26 |
kidney rudiment | 2.63e-11 | 26 |
kidney field | 2.63e-11 | 26 |
cavitated compound organ | 1.15e-09 | 31 |
gland of gut | 6.56e-08 | 10 |
urinary system structure | 9.72e-07 | 47 |