FFCP PHASE1:Hg19::chr21:27794750..27794757,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4073 | |||
|description=CAGE_peak_at_chr21:27794750..27794757,+ | |||
|id=chr21:27794750..27794757,+ | |||
|ontology_enrichment_celltype=CL:0000080!1.33e-19!6;CL:0002618!2.95e-17!3;CL:0002543!4.20e-09!6;CL:0000084!2.88e-08!25;CL:0000827!2.88e-08!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.16e-29;7 | |||
|ontology_enrichment_disease=DOID:0060058!1.89e-20!10;DOID:0060060!6.65e-14!1;DOID:0060061!6.65e-14!1;DOID:8691!6.65e-14!1;DOID:2531!1.69e-08!51;DOID:0060083!1.69e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.72e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.54e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.48e-38!3;UBERON:0004854!3.48e-38!3;UBERON:0009034!3.48e-38!3;UBERON:0002095!3.48e-38!3;UBERON:0004782!3.48e-38!3;UBERON:0003281!3.48e-38!3;UBERON:0009664!3.48e-38!3;UBERON:0002296!3.48e-38!3;UBERON:0005602!3.48e-38!3;UBERON:0001179!3.48e-38!3;UBERON:0006293!3.48e-38!3;UBERON:0004177!8.84e-17!7;UBERON:0000945!9.21e-15!8;UBERON:0010039!9.21e-15!8;UBERON:0002331!5.20e-12!10;UBERON:0000358!5.20e-12!10;UBERON:0000307!5.20e-12!10;UBERON:0000091!5.20e-12!10;UBERON:0000087!5.20e-12!10;UBERON:0007806!5.20e-12!10;UBERON:0008780!5.20e-12!10;UBERON:0005728!5.20e-12!10;UBERON:0002066!9.62e-11!5;UBERON:0004457!4.91e-10!12;UBERON:0000042!4.91e-10!12;UBERON:0000178!3.47e-08!15;UBERON:0000179!3.47e-08!15;UBERON:0000463!3.47e-08!15;UBERON:0002075!7.38e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.40e-66;3!UBERON:0004177;2.22e-40;5!UBERON:0005057;2.22e-40;5!UBERON:0002390;2.55e-13;32!UBERON:0002075;4.31e-12;18!UBERON:0000077;2.06e-08;27!UBERON:0002405;2.06e-08;27!UBERON:0002193;2.61e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.71e-66,3;UBERON:0004854,1.71e-66,3;UBERON:0009034,1.71e-66,3;UBERON:0002095,1.71e-66,3;UBERON:0004782,1.71e-66,3;UBERON:0003281,1.71e-66,3;UBERON:0009664,1.71e-66,3;UBERON:0002296,1.71e-66,3;UBERON:0005602,1.71e-66,3;UBERON:0001179,1.71e-66,3;UBERON:0006293,1.71e-66,3;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000945,8.65e-26,8;UBERON:0010039,8.65e-26,8;UBERON:0004457,1.33e-17,12;UBERON:0000042,1.33e-17,12;UBERON:0003887,1.33e-17,12;UBERON:0002075,4.07e-12,18;UBERON:0005409,1.03e-08,25;UBERON:0000077,6.44e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.86494757262552,1.56632924258183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59772660565751,0.0644578879735772,2.59847005404815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:27794750..27794757,+ | |||
}} |
Revision as of 13:13, 21 January 2014
Short description: | p@chr21:27794750..27794757, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:27794750..27794757, + |
Coexpression cluster: | C4073_splenic_cord_adult_hairy_spleen_Multipotent_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.71e-66 | 3 |
gastrointestinal system mesentery | 1.71e-66 | 3 |
stomach region | 1.71e-66 | 3 |
mesentery | 1.71e-66 | 3 |
gastrointestinal system serosa | 1.71e-66 | 3 |
mesentery of stomach | 1.71e-66 | 3 |
gut mesentery | 1.71e-66 | 3 |
dorsal mesentery | 1.71e-66 | 3 |
dorsal mesogastrium | 1.71e-66 | 3 |
peritoneal cavity | 1.71e-66 | 3 |
spleen primordium | 1.71e-66 | 3 |
hemopoietic organ | 2.74e-29 | 7 |
immune organ | 2.74e-29 | 7 |
stomach | 8.65e-26 | 8 |
food storage organ | 8.65e-26 | 8 |
cavity lining | 1.33e-17 | 12 |
serous membrane | 1.33e-17 | 12 |
intraembryonic coelom | 1.33e-17 | 12 |
viscus | 4.07e-12 | 18 |
gastrointestinal system | 1.03e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.54e-21 | 10 |