FFCP PHASE1:Hg19::chr22:40342993..40343005,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9402 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4563 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=137bp_to_uc003ayj.1_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_9_at_GRAP2_5end | |||
|id=chr22:40342993..40343005,+ | |||
|ontology_enrichment_celltype=CL:0000094!1.77e-12!8;CL:0000842!1.99e-09!3;CL:0000767!6.40e-09!3;CL:0000081!7.36e-09!11;CL:0000224!3.76e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.18e-14;8!CL:0000081;1.64e-10;11!CL:0000226;1.70e-10;3!CL:0000842;1.70e-10;3!CL:0000775;2.49e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.11e-14,8;CL:0000081,1.59e-10,11;CL:0000226,1.79e-10,3;CL:0000842,1.79e-10,3;CL:0000775,2.49e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.31e-12!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.38e-14;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.03e-14,8 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.14e-27!15;UBERON:0000179!3.14e-27!15;UBERON:0000463!3.14e-27!15;UBERON:0007023!2.83e-11!115;UBERON:0000988!4.69e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-57;15!UBERON:0000179;1.22e-57;15!UBERON:0000463;1.22e-57;15!UBERON:0002390;4.25e-34;32!UBERON:0002193;2.29e-18;42!UBERON:0002106;3.64e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.29e-57,15;UBERON:0000179,1.29e-57,15;UBERON:0000463,1.29e-57,15;UBERON:0002106,4.19e-10,3;UBERON:0004854,4.19e-10,3;UBERON:0009034,4.19e-10,3;UBERON:0002095,4.19e-10,3;UBERON:0004782,4.19e-10,3;UBERON:0003281,4.19e-10,3;UBERON:0009664,4.19e-10,3;UBERON:0002296,4.19e-10,3;UBERON:0005602,4.19e-10,3;UBERON:0001179,4.19e-10,3;UBERON:0006293,4.19e-10,3;UBERON:0002390,5.02e-10,98;UBERON:0003061,5.02e-10,98;UBERON:0002193,6.94e-09,108;UBERON:0001009,3.02e-07,112;UBERON:0007023,4.94e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,2.30297638858328,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,4.02326707968138,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,2.24702107184155,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,2.37285620900479,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,45.1628372216631,33.6440371142645,35.3181256047981,21.440859791201,17.2772154696202,39.5568719827558,29.1616976108582,42.8287595198906,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,23.948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,1.35357396370308,1.9606253431774,2.3495022176618,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9171149636534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11585728720936,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10462603746695,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.533937062838473,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.603851374266694,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0,1.4097587696978,1.09578409555081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54755802832024,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p9@GRAP2 | |||
}} |
Revision as of 16:09, 21 January 2014
Short description: | p9@GRAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GRAP2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 137bp_to_uc003ayj.1_5end |
EntrezGene: | GRAP2 |
HGNC: | 4563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.11e-14 | 8 |
blood cell | 1.59e-10 | 11 |
single nucleate cell | 1.79e-10 | 3 |
mononuclear cell | 1.79e-10 | 3 |
neutrophil | 2.49e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.29e-57 | 15 |
haemolymphatic fluid | 1.29e-57 | 15 |
organism substance | 1.29e-57 | 15 |
spleen | 4.19e-10 | 3 |
gastrointestinal system mesentery | 4.19e-10 | 3 |
stomach region | 4.19e-10 | 3 |
mesentery | 4.19e-10 | 3 |
gastrointestinal system serosa | 4.19e-10 | 3 |
mesentery of stomach | 4.19e-10 | 3 |
gut mesentery | 4.19e-10 | 3 |
dorsal mesentery | 4.19e-10 | 3 |
dorsal mesogastrium | 4.19e-10 | 3 |
peritoneal cavity | 4.19e-10 | 3 |
spleen primordium | 4.19e-10 | 3 |
hematopoietic system | 5.02e-10 | 98 |
blood island | 5.02e-10 | 98 |
hemolymphoid system | 6.94e-09 | 108 |
circulatory system | 3.02e-07 | 112 |
adult organism | 4.94e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.03e-14 | 8 |