FFCP PHASE1:Hg19::chr2:135596106..135596137,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19288 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TDX5 | |||
|association_with_transcript=0bp_to_ENST00000356140_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_ACMSD_5end | |||
|id=chr2:135596106..135596137,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.64e-09!3;CL:1000615!1.64e-09!3;CL:0002306!1.64e-09!3;CL:0000181!3.18e-09!12;CL:0000417!3.18e-09!12;CL:0000668!3.18e-09!12;CL:0000414!3.18e-09!12;CL:0000412!3.18e-09!12;CL:0000182!3.18e-09!12;CL:0000313!7.97e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.13e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.13e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.63e-09;31!UBERON:0003918;1.37e-07;10!UBERON:0007687;1.37e-07;10!UBERON:0004161;5.81e-07;11 | |||
|ontology_enrichment_disease=DOID:2152!7.97e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.86e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.86e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.12e-17!55;UBERON:0005173!1.12e-17!55;UBERON:0002417!1.09e-15!61;UBERON:0000916!1.09e-15!61;UBERON:0009497!2.34e-12!25;UBERON:0000015!2.34e-12!25;UBERON:0002423!2.34e-12!25;UBERON:0006235!2.34e-12!25;UBERON:0004161!2.34e-12!25;UBERON:0002107!2.50e-12!19;UBERON:0006925!2.50e-12!19;UBERON:0008836!2.50e-12!19;UBERON:0005057!9.73e-12!26;UBERON:0005177!9.43e-11!107;UBERON:0008835!1.44e-10!22;UBERON:0003894!1.44e-10!22;UBERON:0009854!4.39e-10!23;UBERON:0006853!1.64e-09!3;UBERON:0007685!1.64e-09!3;UBERON:0004134!1.64e-09!3;UBERON:0007499!3.13e-09!25;UBERON:0009856!7.47e-09!26;UBERON:0009569!1.38e-08!113;UBERON:0004911!7.97e-08!1;UBERON:0002146!1.26e-07!1;UBERON:0005623!1.26e-07!1;UBERON:0000466!2.27e-07!126;UBERON:0002365!2.49e-07!31;UBERON:0002330!2.49e-07!31;UBERON:0003929!9.35e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.45e-22;19!UBERON:0006925;5.45e-22;19!UBERON:0002423;9.54e-17;25!UBERON:0002365;1.67e-13;31!UBERON:0002330;1.67e-13;31!UBERON:0002368;1.05e-11;33!UBERON:0005172;2.46e-11;52!UBERON:0005173;2.46e-11;52!UBERON:0000949;1.40e-08;43!UBERON:0002417;8.46e-08;58!UBERON:0000916;8.46e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.45e-22,19;UBERON:0006925,5.45e-22,19;UBERON:0008836,5.45e-22,19;UBERON:0008835,5.17e-19,22;UBERON:0003894,5.17e-19,22;UBERON:0009854,3.42e-18,23;UBERON:0007499,9.54e-17,25;UBERON:0009497,9.54e-17,25;UBERON:0000015,9.54e-17,25;UBERON:0002423,9.54e-17,25;UBERON:0006235,9.54e-17,25;UBERON:0004161,9.54e-17,25;UBERON:0009856,4.16e-16,26;UBERON:0005172,9.78e-15,54;UBERON:0005173,9.78e-15,54;UBERON:0002365,1.59e-13,31;UBERON:0002330,1.59e-13,31;UBERON:0002417,3.16e-13,60;UBERON:0000916,3.16e-13,60;UBERON:0002368,5.50e-12,35;UBERON:0000949,2.50e-09,45;UBERON:0003929,9.01e-08,54;UBERON:0005177,1.11e-07,101;UBERON:0002530,4.14e-07,59;UBERON:0009569,7.04e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18619221860704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.1669132322957,16.7080626835196,41.9460833743797,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,19.680833224715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1237931825431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0,28.8428888715065,11.0154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,33.5604615122809,6.62534444561107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,3.65753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ACMSD | |||
}} |
Revision as of 05:32, 21 January 2014
Short description: | p2@ACMSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACMSD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000356140_5end |
EntrezGene: | ACMSD |
HGNC: | 19288 |
UniProt: | Q8TDX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.13e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.45e-22 | 19 |
digestive gland | 5.45e-22 | 19 |
liver bud | 5.45e-22 | 19 |
hepatic diverticulum | 5.17e-19 | 22 |
liver primordium | 5.17e-19 | 22 |
digestive tract diverticulum | 3.42e-18 | 23 |
epithelial sac | 9.54e-17 | 25 |
epithelium of foregut-midgut junction | 9.54e-17 | 25 |
anatomical boundary | 9.54e-17 | 25 |
hepatobiliary system | 9.54e-17 | 25 |
foregut-midgut junction | 9.54e-17 | 25 |
septum transversum | 9.54e-17 | 25 |
sac | 4.16e-16 | 26 |
abdomen element | 9.78e-15 | 54 |
abdominal segment element | 9.78e-15 | 54 |
exocrine gland | 1.59e-13 | 31 |
exocrine system | 1.59e-13 | 31 |
abdominal segment of trunk | 3.16e-13 | 60 |
abdomen | 3.16e-13 | 60 |
endocrine gland | 5.50e-12 | 35 |
endocrine system | 2.50e-09 | 45 |
gut epithelium | 9.01e-08 | 54 |
trunk region element | 1.11e-07 | 101 |
gland | 4.14e-07 | 59 |
subdivision of trunk | 7.04e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.86e-09 | 2 |