Personal tools

FFCP PHASE1:Mm9::chr10:117282994..117283005,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=215449|HGNC=|MCL_coexpression_id=586|UniProt=Q99JI6|association_with_transcript=-3bp_to_ENSMUST00000064667_5end|description=CAGE_peak_2_at_Rap1b_5end|id=chr10:117282994..117283005,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!3.47e-09!131;UBERON:0009142!3.47e-09!131;UBERON:0000926!8.31e-08!193;UBERON:0004120!8.31e-08!193;UBERON:0006603!8.31e-08!193;UBERON:0004119!2.79e-07!130;UBERON:0000925!2.79e-07!130;UBERON:0006595!2.79e-07!130;UBERON:0000914!6.84e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.52e-07,118;UBERON:0000925,1.52e-07,118;UBERON:0006595,1.52e-07,118;UBERON:0001007,7.00e-07,116;UBERON:0001555,7.00e-07,116;UBERON:0007026,7.00e-07,116|phase1_expression=6.88640042550614,6.63053274514786,7.73498706962211,5.44435580352294,4.50806156951712,6.37941233265181,6.77476657727024,14.8491821957813,30.2695752626083,25.0449043164533,7.19115466547121,5.98291192465023,13.6960583944965,17.3092396789615,6.66219523631325,4.45445588257617,3.49780939064073,8.3597473819933,8.77532375076728,5.94145512517242,3.14660173558958,1.98581902401771,2.08959831311148,8.47959840805055,9.63518980482114,12.6331032105304,9.47676391549965,5.817723282519,6.84084310042946,6.30075324399827,7.76056787293567,1.27006134691926,2.46025915033828,0,1.73310971850765,2.49351968037739,2.85837098767317,30.9713406745312,19.533383613095,29.8408534065065,32.3527318417058,30.0540013381716,25.7320487106511,15.8629990649227,14.9024088892686,9.36088436024576,1.56478268869608,1.30815093828268,2.85592037554813,3.11087838518853,3.07970127575798,1.43752564364972,15.6037823633695,36.2681071005672,23.8626597391149,5.91696702882678,6.01720223871389,12.8918023069361,3.23706337375356,0.528990979272033,1.26766280701236,3.04960078862219,0,2.2497492932035,2.96659908770092,0.7104801149461,2.39680088414724,0.768436610643109,2.28117147078651,1.62007125998029,1.68259969081106,2.28520787523043,1.10434270475807,2.44981598429908,1.62937300731002,0,2.20231761998777,2.55374676170375,2.76491759861238,3.03338461779446,3.65950574409639,1.56274011167028,2.51264699101243,3.93933827022176,2.75036845998258,2.94628585473668,3.41692033917847,2.98239113320481,5.60373830665562,6.42358260907677,13.0439019915755,4.30211938490693,2.719885334831,3.77792234146472,3.24888208723835,5.37632264516803,3.65155492342555,12.1005529030421,10.9110121933205,9.54016851177919,5.49289337129054,3.84979432242953,7.64415719119937,0,5.19578498426914,5.32055717497707,2.02209778005913,4.68153906848146,9.06282592765101,6.38301197978747,4.68410382268567,7.91610243611567,5.5347719341454,8.44046787094686,8.70156432804216,6.53466274914312,9.39340877390621,6.65157041831594,10.6153266233985,7.44127509758082,7.50861162765338,8.24287930329878,1.86391761218122,2.04946557908083,2.51336048176146,4.34276993854605,10.7833612055328,12.5979573508616,12.8340929343795,1.79748767285787,2.28750301409313,4.39790232395025,5.04090528557602,4.85859368927628,2.28566849015516,2.75810147215188,5.70300437561771,8.08645308965605,4.54900965180614,6.31325567659422,2.21204753036596,2.06911893990126,2.16074555766419,3.0140963567143,3.87808045162569,4.99643509110914,4.2165776051878,4.9153640440413,1.72454394346274,2.45837904218165,1.75951124163949,2.6303487891309,2.50242524303038,4.87553033131033,5.14455341019859,3.18454826909589,19.6619692447706,12.610047448621,14.7765019685708,2.07125772535502,3.75241695969754,2.16074473753218,2.3674473558521,3.54175617145327,5.55361606394562,2.79040733700489,2.95100741539581,5.60473643362414,4.93679549740441,6.895033491322,6.97191762094359,5.99419948443863,4.83010253640311,4.42881181909227,3.15434922846191,5.14523061896422,9.25172592354634,1.85115396664481,3.62590025909898,3.94802342162745,2.70621668776396,3.83198696784351,3.7804267453628,5.70676878337677,7.11793592316767,5.43506550589236,5.52937459360593,9.94782360205754,8.57841983324129,8.08937467788799,5.40345124686736,4.97853183135918,1.32767530667157,3.08470984046268,1.1270773567308,3.25842124552503,2.32742984601151,5.33032231166421,5.24863258131335,3.09981310757165,4.55296310739987,4.56569506510662,4.15033677922008,5.83957870006329,4.12773889737726,3.37293168577281,5.27436315610108,4.10001171579109,3.56476192493988,3.16465751195892,5.83686816390127,4.94210543738547,12.9391385874619,7.81495990103857,5.30464044294753,4.54641980304801,3.76734568396016,3.85954817090694,16.0735275444946,2.4633883530163,3.58522948172457,5.09235257325564,4.69380496577004,6.53274404023081,7.61739650835244,12.8788207586147,13.0837169608139,8.858587585951,12.118562417969,13.6006551214063,11.2245238212832,12.0058718622655,4.52373851817817,7.61467957346193,7.86822836830458,6.34654516500885,1.9266070798535,3.5163505977661,6.06559297893699,4.79694761688309,2.52406575533005,3.12350995437311,1.93881057959519,2.38968797952552,4.01037613348309,1.13230612315533,3.23848561339915,2.04579100537918,1.97643888973262,3.53453448063988,3.40656204499845,3.5613120733451,7.81857404897165,3.79431282836832,2.65490276679926,4.85561272309963,3.32555912661226,4.90373207365335,2.95301892880773,5.84126781093462,6.71913562237375,6.5436071305951,4.27796854061666,4.74055136903724,3.16255825724996,6.18813259489121,3.74483566329167,2.52085531643834,2.06973894052407,2.57204442037911,3.01478397191865,2.67553226403106,6.74650984468696,4.26250928760439,12.9069439435041,11.8625959683739,5.29268155331909,5.60613260001032,10.0107944551461,6.09160541774374,6.44610657616937,4.59594519286172,6.12109756922687,1.48340241608408,6.32222258952055,5.57244543500701,7.22258656741876,7.34636982318295,5.19438065339896,9.83746144788047,16.3179292794101,17.3539800881336,16.9985967779441,8.59203556213602,2.37251995185852,3.65975040828328,4.32021363287205,3.3454127362315,4.36725127492355,6.60835297285622,7.68677138245624,6.02038666563268,6.99920855775682,6.83473244395618,1.12738587736838,2.69129782879162,2.64733584731356,3.50012139019286,6.19967152693109,5.4065960157049,6.10257640957921,6.2498104725096,4.19437377702843,2.65742532908607,1.44015003128933,6.63623353319174,3.64905387522296,3.18403967210964,3.89762468933385,3.22248052201467,2.78153896693771,5.64918612743854,6.64602872285597,6.15895344683701,6.85861259894999,5.44461399738939,7.40679893622118,5.67649865677944,8.88264456579924,5.66825959038028,2.88581739386284,2.15313255862742,5.54019234001459,5.9888774149979,12.7624083306804,7.14291334642334,6.00231461421384,4.01257683228291,0.564751842617067,1.38097570952153,1.71868654031819,3.43706364687375,6.85082519770642,3.7769694869485,2.02506750069542,1.80128481289688,3.17199686288943,3.10656187051092,1.24544817101012,1.99512436700516,3.41467211508268,3.8897074730927,2.93458427679175,3.8607136774503,1.77797382241292,4.12070114477788,6.4183841918363,3.53776096469316,4.30914809813408,3.39527414494937,4.40115085108447,4.03358460150676,4.59483751644906,3.81034953026459,3.94006708212509,3.8581844092741,6.59337441285291,2.64958056241915,4.11443102862498,5.14679837862079,3.09967046931517,4.21504608233753,4.04670335785922,5.753793336634,3.29270351170991,2.63069711437843,3.12349461845482,2.80571135828869,3.91495559809775,4.13718825977367,2.45538625901814,3.71848418846318,3.08650577569826,1.49886346762768,4.44470056046276,8.59484216193193,6.50380329034067,6.39715115446595,8.57910991795559|short_description=p2@Rap1b}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:215449
|HGNC=
|MCL_coexpression_id=586
|TSSclassifier=NA
|UniProt=uniprot:Q99JI6
|association_with_transcript=-3bp_to_ENSMUST00000064667_5end
|cluster_id=chr10:117282994..117283005,-
|description=CAGE_peak_2_at_Rap1b_5end
|id=chr10:117282994..117283005,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003104!3.47e-09!131;UBERON:0009142!3.47e-09!131;UBERON:0000926!8.31e-08!193;UBERON:0004120!8.31e-08!193;UBERON:0006603!8.31e-08!193;UBERON:0004119!2.79e-07!130;UBERON:0000925!2.79e-07!130;UBERON:0006595!2.79e-07!130;UBERON:0000914!6.84e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.52e-07,118;UBERON:0000925,1.52e-07,118;UBERON:0006595,1.52e-07,118;UBERON:0001007,7.00e-07,116;UBERON:0001555,7.00e-07,116;UBERON:0007026,7.00e-07,116
|phase1_expression=6.88640042550614,6.63053274514786,7.73498706962211,5.44435580352294,4.50806156951712,6.37941233265181,6.77476657727024,14.8491821957813,30.2695752626083,25.0449043164533,7.19115466547121,5.98291192465023,13.6960583944965,17.3092396789615,6.66219523631325,4.45445588257617,3.49780939064073,8.3597473819933,8.77532375076728,5.94145512517242,3.14660173558958,1.98581902401771,2.08959831311148,8.47959840805055,9.63518980482114,12.6331032105304,9.47676391549965,5.817723282519,6.84084310042946,6.30075324399827,7.76056787293567,1.27006134691926,2.46025915033828,0,1.73310971850765,2.49351968037739,2.85837098767317,30.9713406745312,19.533383613095,29.8408534065065,32.3527318417058,30.0540013381716,25.7320487106511,15.8629990649227,14.9024088892686,9.36088436024576,1.56478268869608,1.30815093828268,2.85592037554813,3.11087838518853,3.07970127575798,1.43752564364972,15.6037823633695,36.2681071005672,23.8626597391149,5.91696702882678,6.01720223871389,12.8918023069361,3.23706337375356,0.528990979272033,1.26766280701236,3.04960078862219,0,2.2497492932035,2.96659908770092,0.7104801149461,2.39680088414724,0.768436610643109,2.28117147078651,1.62007125998029,1.68259969081106,2.28520787523043,1.10434270475807,2.44981598429908,1.62937300731002,0,2.20231761998777,2.55374676170375,2.76491759861238,3.03338461779446,3.65950574409639,1.56274011167028,2.51264699101243,3.93933827022176,2.75036845998258,2.94628585473668,3.41692033917847,2.98239113320481,5.60373830665562,6.42358260907677,13.0439019915755,4.30211938490693,2.719885334831,3.77792234146472,3.24888208723835,5.37632264516803,3.65155492342555,12.1005529030421,10.9110121933205,9.54016851177919,5.49289337129054,3.84979432242953,7.64415719119937,0,5.19578498426914,5.32055717497707,2.02209778005913,4.68153906848146,9.06282592765101,6.38301197978747,4.68410382268567,7.91610243611567,5.5347719341454,8.44046787094686,8.70156432804216,6.53466274914312,9.39340877390621,6.65157041831594,10.6153266233985,7.44127509758082,7.50861162765338,8.24287930329878,1.86391761218122,2.04946557908083,2.51336048176146,4.34276993854605,10.7833612055328,12.5979573508616,12.8340929343795,1.79748767285787,2.28750301409313,4.39790232395025,5.04090528557602,4.85859368927628,2.28566849015516,2.75810147215188,5.70300437561771,8.08645308965605,4.54900965180614,6.31325567659422,2.21204753036596,2.06911893990126,2.16074555766419,3.0140963567143,3.87808045162569,4.99643509110914,4.2165776051878,4.9153640440413,1.72454394346274,2.45837904218165,1.75951124163949,2.6303487891309,2.50242524303038,4.87553033131033,5.14455341019859,3.18454826909589,19.6619692447706,12.610047448621,14.7765019685708,2.07125772535502,3.75241695969754,2.16074473753218,2.3674473558521,3.54175617145327,5.55361606394562,2.79040733700489,2.95100741539581,5.60473643362414,4.93679549740441,6.895033491322,6.97191762094359,5.99419948443863,4.83010253640311,4.42881181909227,3.15434922846191,5.14523061896422,9.25172592354634,1.85115396664481,3.62590025909898,3.94802342162745,2.70621668776396,3.83198696784351,3.7804267453628,5.70676878337677,7.11793592316767,5.43506550589236,5.52937459360593,9.94782360205754,8.57841983324129,8.08937467788799,5.40345124686736,4.97853183135918,1.32767530667157,3.08470984046268,1.1270773567308,3.25842124552503,2.32742984601151,5.33032231166421,5.24863258131335,3.09981310757165,4.55296310739987,4.56569506510662,4.15033677922008,5.83957870006329,4.12773889737726,3.37293168577281,5.27436315610108,4.10001171579109,3.56476192493988,3.16465751195892,5.83686816390127,4.94210543738547,12.9391385874619,7.81495990103857,5.30464044294753,4.54641980304801,3.76734568396016,3.85954817090694,16.0735275444946,2.4633883530163,3.58522948172457,5.09235257325564,4.69380496577004,6.53274404023081,7.61739650835244,12.8788207586147,13.0837169608139,8.858587585951,12.118562417969,13.6006551214063,11.2245238212832,12.0058718622655,4.52373851817817,7.61467957346193,7.86822836830458,6.34654516500885,1.9266070798535,3.5163505977661,6.06559297893699,4.79694761688309,2.52406575533005,3.12350995437311,1.93881057959519,2.38968797952552,4.01037613348309,1.13230612315533,3.23848561339915,2.04579100537918,1.97643888973262,3.53453448063988,3.40656204499845,3.5613120733451,7.81857404897165,3.79431282836832,2.65490276679926,4.85561272309963,3.32555912661226,4.90373207365335,2.95301892880773,5.84126781093462,6.71913562237375,6.5436071305951,4.27796854061666,4.74055136903724,3.16255825724996,6.18813259489121,3.74483566329167,2.52085531643834,2.06973894052407,2.57204442037911,3.01478397191865,2.67553226403106,6.74650984468696,4.26250928760439,12.9069439435041,11.8625959683739,5.29268155331909,5.60613260001032,10.0107944551461,6.09160541774374,6.44610657616937,4.59594519286172,6.12109756922687,1.48340241608408,6.32222258952055,5.57244543500701,7.22258656741876,7.34636982318295,5.19438065339896,9.83746144788047,16.3179292794101,17.3539800881336,16.9985967779441,8.59203556213602,2.37251995185852,3.65975040828328,4.32021363287205,3.3454127362315,4.36725127492355,6.60835297285622,7.68677138245624,6.02038666563268,6.99920855775682,6.83473244395618,1.12738587736838,2.69129782879162,2.64733584731356,3.50012139019286,6.19967152693109,5.4065960157049,6.10257640957921,6.2498104725096,4.19437377702843,2.65742532908607,1.44015003128933,6.63623353319174,3.64905387522296,3.18403967210964,3.89762468933385,3.22248052201467,2.78153896693771,5.64918612743854,6.64602872285597,6.15895344683701,6.85861259894999,5.44461399738939,7.40679893622118,5.67649865677944,8.88264456579924,5.66825959038028,2.88581739386284,2.15313255862742,5.54019234001459,5.9888774149979,12.7624083306804,7.14291334642334,6.00231461421384,4.01257683228291,0.564751842617067,1.38097570952153,1.71868654031819,3.43706364687375,6.85082519770642,3.7769694869485,2.02506750069542,1.80128481289688,3.17199686288943,3.10656187051092,1.24544817101012,1.99512436700516,3.41467211508268,3.8897074730927,2.93458427679175,3.8607136774503,1.77797382241292,4.12070114477788,6.4183841918363,3.53776096469316,4.30914809813408,3.39527414494937,4.40115085108447,4.03358460150676,4.59483751644906,3.81034953026459,3.94006708212509,3.8581844092741,6.59337441285291,2.64958056241915,4.11443102862498,5.14679837862079,3.09967046931517,4.21504608233753,4.04670335785922,5.753793336634,3.29270351170991,2.63069711437843,3.12349461845482,2.80571135828869,3.91495559809775,4.13718825977367,2.45538625901814,3.71848418846318,3.08650577569826,1.49886346762768,4.44470056046276,8.59484216193193,6.50380329034067,6.39715115446595,8.57910991795559
|short_description=p2@Rap1b
}}

Revision as of 22:43, 3 August 2015

Short description:p2@Rap1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rap1b_5end
Coexpression cluster:MCL_coexpression_mm9:586
Association with transcript: -3bp_to_ENSMUST00000064667_5end
EntrezGene:215449
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rap1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E730.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.64
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I25.82
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H425.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.90
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.27
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.86
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D95.60
Mouse Schwann, donor2.CNhs12573.11746-123F96.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F58.44
adrenal gland, neonate N00.CNhs11191.1311-23C18.70
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A89.39
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A67.51
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.83
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.09
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C63.88
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.78
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E35.60
heart, neonate N03.CNhs11221.1349-25I24.94
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G16.97
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G15.15
intestinal mucosa, adult.CNhs10506.860-29I39.25
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G75.33
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B116.07
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C612.88
lung, neonate N06.CNhs11212.683-20E513.08
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E612.12
lung, neonate N20.CNhs11109.822-18A413.60
lung, neonate N25.CNhs11119.1359-25C711.22
lung, neonate N30.CNhs11133.1394-42H212.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I47.82
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I712.91
placenta, adult pregnant day17.CNhs10464.577-18G311.86
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G410.01
skin, neonate N03.CNhs11215.662-22H36.09
skin, neonate N06.CNhs11097.693-20I56.45
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G26.32
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.00
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B86.61
stomach, neonate N07.CNhs11210.718-18A97.69
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I56.20
testis, embryo E18.CNhs11027.503-18G55.41
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I46.25
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C46.16
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G75.68
thymus, neonate N30.CNhs11132.1393-42G28.88
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F512.76
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.52e-07118
endoderm1.52e-07118
presumptive endoderm1.52e-07118
digestive system7.00e-07116
digestive tract7.00e-07116
primitive gut7.00e-07116
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:117282994..117283005,-&oldid=3709149"