FFCP PHASE1:Hg19::chr2:219849784..219849798,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54738 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18562 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_DQ893402,DQ896784_5end | |||
|coexpression_cluster_id=C732 | |||
|description=CAGE_peak_5_at_FEV_5end | |||
|id=chr2:219849784..219849798,- | |||
|ontology_enrichment_celltype=CL:0000242!3.70e-15!2;CL:0002553!1.77e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.73e-37;2!CL:0000242;2.73e-37;2!CL:0000333;9.77e-33;5!CL:0002553;1.08e-19;1!CL:0000312;1.40e-15;5!CL:0000240;3.77e-13;6!CL:0000311;3.77e-13;6!CL:0000079;3.77e-13;6!CL:0000237;3.77e-13;6!CL:0002321;2.14e-11;15!CL:0002535;2.37e-10;2!CL:0000362;4.43e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.73e-37,2;CL:0002553,1.08e-19,1;CL:0000312,1.40e-15,5;CL:0000240,3.77e-13,6;CL:0000311,3.77e-13,6;CL:0000079,3.77e-13,6;CL:0000237,3.77e-13,6;CL:0000036,3.77e-13,6;CL:0000357,3.77e-13,6;CL:0000114,3.77e-13,6;CL:0000333,1.37e-10,41;CL:0002535,2.49e-10,2;CL:0000362,4.43e-09,9;CL:0000133,1.79e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000357;3.77e-13;6!CL:0000114;3.77e-13;6 | |||
|ontology_enrichment_disease=DOID:171!4.15e-11!10;DOID:169!5.28e-11!6;DOID:3095!1.52e-07!22;DOID:2994!1.52e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:169;2.02e-27;6!DOID:171;9.29e-17;10!DOID:3095;5.86e-08;22!DOID:2994;5.86e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.93e-27,6;DOID:171,9.05e-17,10;DOID:3095,5.79e-08,22;DOID:2994,5.79e-08,22;DOID:0050687,1.26e-07,143;DOID:162,5.67e-07,235;DOID:14566,8.24e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002298!2.73e-20!8;UBERON:0000988!3.81e-20!3;UBERON:0002148!4.32e-14!2;UBERON:0009662!4.32e-14!2;UBERON:0004733!1.74e-13!12;UBERON:0002028!1.74e-13!12;UBERON:0007277!1.74e-13!12;UBERON:0000013!4.19e-13!5;UBERON:0002410!4.19e-13!5;UBERON:0004732!1.95e-12!13;UBERON:0003076!9.34e-11!15;UBERON:0003057!9.34e-11!15;UBERON:0001896!9.81e-10!3;UBERON:0005290!9.81e-10!3;UBERON:0010096!9.81e-10!3;UBERON:0006331!1.07e-09!3;UBERON:0002581!1.14e-07!1;UBERON:0000073!1.26e-07!94;UBERON:0001016!1.26e-07!94;UBERON:0000010!1.75e-07!8;UBERON:0002680!4.62e-07!9;UBERON:0001895!4.62e-07!9;UBERON:0010092!4.62e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.77e-33;5!UBERON:0002410;9.77e-33;5!UBERON:0000010;1.54e-18;8!UBERON:0006955;2.37e-10;2!UBERON:0004801;2.37e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.25e-33,5;UBERON:0002410,9.25e-33,5;UBERON:0000010,1.49e-18,8;UBERON:0006955,2.49e-10,2;UBERON:0004801,2.49e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,5.18906365725323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,1.08182271390393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78672220923124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.248385611765534,0,0,0,0,0,7.02502358710322,10.8690771458119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58104239650225,3.23474434190045,0,4.91443371864063,0,0,0,0,0,0,11.2079904759966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.90032364033,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@FEV | |||
}} |
Revision as of 08:43, 21 January 2014
Short description: | p5@FEV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FEV_5end |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | 0bp_to_DQ893402, DQ896784_5end |
EntrezGene: | FEV |
HGNC: | 18562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.73e-37 | 2 |
lung fibroblast | 1.08e-19 | 1 |
keratinocyte | 1.40e-15 | 5 |
stratified squamous epithelial cell | 3.77e-13 | 6 |
keratin accumulating cell | 3.77e-13 | 6 |
stratified epithelial cell | 3.77e-13 | 6 |
keratinizing barrier epithelial cell | 3.77e-13 | 6 |
epithelial fate stem cell | 3.77e-13 | 6 |
stratified epithelial stem cell | 3.77e-13 | 6 |
surface ectodermal cell | 3.77e-13 | 6 |
migratory neural crest cell | 1.37e-10 | 41 |
epithelial cell of cervix | 2.49e-10 | 2 |
epidermal cell | 4.43e-09 | 9 |
neurectodermal cell | 1.79e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.25e-33 | 5 |
autonomic nervous system | 9.25e-33 | 5 |
peripheral nervous system | 1.49e-18 | 8 |
uterine epithelium | 2.49e-10 | 2 |
cervix epithelium | 2.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.93e-27 | 6 |
neuroectodermal tumor | 9.05e-17 | 10 |
germ cell and embryonal cancer | 5.79e-08 | 22 |
germ cell cancer | 5.79e-08 | 22 |
cell type cancer | 1.26e-07 | 143 |
cancer | 5.67e-07 | 235 |
disease of cellular proliferation | 8.24e-07 | 239 |